========== sblock10498 (miRBaseHomolog mmu-mir-666) [miRBaseHomolog_rep_lenNOK_cloningHIGH_multiarm_DicerOK] ========== #randfold sblock10498: 0.023 randfold human18p83_sblock10498: 0.084 randfold mouseZ2p83_sblock10498: 0.007 #forester human18p83_sblock10498: 0.344108 forester mouseZ2p83_sblock10498: 0.900648 #identity: 78.31 sblock10498 AGCGGGCACGGCTGTGAGA #rat_gr162370_libT1S2 19 10 sblock10498 AGCGGGCACGGCTGTGAGA #rat_gr162370_libT1S1 19 7 sblock10498 AGCGGGCACGGCTGTGAGA-G #rat_gr162371_libT1S2 20 7 sblock10498 AGCGGGCACGGCTGTGAGA-G #rat_gr162371_libT1S1 20 6 sblock10498 AGCGGGCACGGCTGTGAG #rat_gr162369_libT1S1 18 3 sblock10498 AGCGGGCACGGCTGTGAGA-GCCCCC #rat_gr162375_libT1S2 25 3 sblock10498 AGCGGGCACGGCTGTGAG #rat_gr162369_libT1S2 18 2 sblock10498 AGCGGGCACGGCTGTGAGA-GC #rat_gr162372_libT1S1 21 2 sblock10498 AGCGGGCACGGCTGTGAGA-GC #rat_gr162372_libT1S2 21 2 sblock10498 AGCGGGCACGGCTGTGAGA #rat_gr162370_libT5S2 19 1 sblock10498 AGCGGGCACGGCTGTGAGA-GCC #rat_gr162373_libT1S1 22 1 sblock10498 AGCGGGCACGGCTGTGAGA-GCC #rat_gr162373_libT1S2 22 1 sblock10498 AGCGGGCACGGCTGTGAGA-GCCC #rat_gr162374_libT1S1 23 1 sblock10498 AGCGGGCACGGCTGTGAGA-GCCCCC #rat_gr162375_libT1S1 25 1 sblock10498 AGGTACAGCGGGGCTGCA #rat_gr190170_libT1S2 18 1 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT1S1 19 1279 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT1S2 19 1023 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT1S2 23 1002 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT1S1 23 898 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT1S1 18 617 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT1S2 18 566 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT1S2 20 527 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT1S1 20 500 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT1S1 21 465 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT1S2 21 461 sblock10498 GGCTGCAGCGTGATCGCCTGCTCA #rat_gr600034_libT1S1 24 96 sblock10498 GGCTGCAGCGTGATCGCCTGCTCA #rat_gr600034_libT1S2 24 94 sblock10498 GCTGCAGCGTGATCGCCTGCTC #rat_gr572255_libT1S2 22 73 sblock10498 GGCTGCAGCGTGATCGCCTGCT #rat_gr600032_libT1S2 22 70 sblock10498 GCTGCAGCGTGATCGCCTGCTC #rat_gr572255_libT1S1 22 67 sblock10498 GGCTGCAGCGTGATCGCCTGCT #rat_gr600032_libT1S1 22 62 sblock10498 GCTGCAGCGTGATCGCCT #rat_gr572251_libT1S1 18 52 sblock10498 GCTGCAGCGTGATCGCCT #rat_gr572251_libT1S2 18 51 sblock10498 GGCTGCAGCGTGATCGCCTGCTCAC #rat_gr600035_libT1S2 25 40 sblock10498 GGCTGCAGCGTGATCGCCTGCTCAC #rat_gr600035_libT1S1 25 37 sblock10498 GCTGCAGCGTGATCGCCTG #rat_gr572252_libT1S2 19 27 sblock10498 GCTGCAGCGTGATCGCCTGC #rat_gr572253_libT1S1 20 27 sblock10498 GCTGCAGCGTGATCGCCTG #rat_gr572252_libT1S1 19 26 sblock10498 GCTGCAGCGTGATCGCCTGC #rat_gr572253_libT1S2 20 24 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT5S2 23 16 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT5S1 23 15 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT5S1 19 12 sblock10498 GCTGCAGCGTGATCGCCTGCTCA #rat_gr572256_libT1S1 23 12 sblock10498 GCTGCAGCGTGATCGCCTGCTCA #rat_gr572256_libT1S2 23 11 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT5S1 20 10 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT5S1 18 8 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT5S2 19 8 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT5S1 21 7 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT5S2 18 6 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT3S2 19 6 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT4S1 19 6 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT4S1 23 6 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT3S1 23 5 sblock10498 GCTGCAGCGTGATCGCCTGCTCAC #rat_gr572257_libT1S1 24 5 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT4S2 20 4 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT5S2 21 4 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT4S2 23 4 sblock10498 GCTGCAGCGTGATCGCCTGCTCAC #rat_gr572257_libT1S2 24 4 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT4S2 18 3 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT3S1 20 3 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT4S1 20 3 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT3S2 21 3 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT3S2 23 3 sblock10498 GCTGCAGCGTGATCGCCT #rat_gr572251_libT5S2 18 3 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT2S1 19 2 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT3S1 19 2 sblock10498 GGCTGCAGCGTGATCGCCT #rat_gr600029_libT4S2 19 2 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT5S2 20 2 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT4S2 21 2 sblock10498 GGCTGCAGCGTGATCGCCTGCT #rat_gr600032_libT3S2 22 2 sblock10498 GGCTGCAGCGTGATCGCCTGCTCAC #rat_gr600035_libT5S1 25 2 sblock10498 GCTGCAGCGTGATCGCCT #rat_gr572251_libT5S1 18 2 sblock10498 GCTGCAGCGTGATCGCCTGCT #rat_gr572254_libT1S1 21 2 sblock10498 GCTGCAGCGTGATCGCCTGCT #rat_gr572254_libT1S2 21 2 sblock10498 CGGGGCTGCAGCGTGATCG #rat_gr401502_libT1S2 19 1 sblock10498 GGGCTGCAGCGTGATCGCCTGCTC #rat_gr608352_libT1S1 24 1 sblock10498 GGGCTGCAGCGTGATCGCCTGCTC #rat_gr608352_libT1S2 24 1 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT2S1 18 1 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT3S1 18 1 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT3S2 18 1 sblock10498 GGCTGCAGCGTGATCGCC #rat_gr600028_libT4S1 18 1 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT2S2 20 1 sblock10498 GGCTGCAGCGTGATCGCCTG #rat_gr600030_libT3S2 20 1 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT2S1 21 1 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT3S1 21 1 sblock10498 GGCTGCAGCGTGATCGCCTGC #rat_gr600031_libT4S1 21 1 sblock10498 GGCTGCAGCGTGATCGCCTGCT #rat_gr600032_libT5S1 22 1 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT2S1 23 1 sblock10498 GGCTGCAGCGTGATCGCCTGCTC #rat_gr600033_libT2S2 23 1 sblock10498 GGCTGCAGCGTGATCGCCTGCTCA #rat_gr600034_libT3S1 24 1 sblock10498 GGCTGCAGCGTGATCGCCTGCTCA #rat_gr600034_libT4S2 24 1 sblock10498 GGCTGCAGCGTGATCGCCTGCTCA #rat_gr600034_libT5S1 24 1 sblock10498 GCTGCAGCGTGATCGCCTG #rat_gr572252_libT5S2 19 1 sblock10498 GCTGCAGCGTGATCGCCTGC #rat_gr572253_libT2S1 20 1 sblock10498 GCTGCAGCGTGATCGCCTGC #rat_gr572253_libT5S1 20 1 sblock10498 GCTGCAGCGTGATCGCCTGCTCAC #rat_gr572257_libT5S1 24 1 sblock10498 CTGCAGCGTGATCGCCTGC #rat_gr441772_libT1S2 19 1 sblock10498 CTGCAGCGTGATCGCCTGCTC #rat_gr441773_libT1S1 21 1 sblock10498 GCCTGTCTACAAGATCCTGATTCTGCCTGCGTGGAGCGGGCACGGCTGTGAGA-GCCCCCTAGGTACAGCGGGGCTGCAGCGTGATCGCCTGCTCACGCACAGGAAGTGACGACAGCG human18p83 -------------------------------------GGACAGGGTCTCACGCTGTCACCCAGG--CAGGAGTGCTGCAGCGTGATC-TCAGCTC----------------------- mouseZ2p83 ----------------------------------AGCGGGCACAGCTGTGAGA-GCCCCCTAGGTACAGCGGGGCTGCAGCGTGATCGCCTGCT------------------------ ** ** * * * * ** *** *** * ************** * *** sblock10498 .....................>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>....... #ENSRNOT00000062111 ENSRNOG00000040358 sblock10498 ((.((((..((...(((((........(((((.((((((((.(((((((...( (((((((......)).))))))))))).))...))))))))))))))))))..))..)))))). 0.780 -53.60 # human18p83 .....(((..((((((((((((((... ..)).)))..))))))))).) ))..... 0.995 -21.90 # mouseZ2p83 (((((((.(((((((...( (((((((......)).))))))))))).))...))))))) 1.000 -30.70 # #sblock10498 chromosome:6:134397005:134397121:1 Same_strand|Exonic_non-coding|ENSRNOT00000062111|ENSRNOG00000040358 ## ENSRNOG00000040358|miRNA|| #human18p83 chromosome:20:33008418:33008574:-1 intergenic ## {Repeats: AluSx -1 class=SINE/Alu} #mouseZ2p83 chromosome:12:110955259:110955415:1 Same_strand|Boundary_non-coding|ENSMUST00000102317|ENSMUSG00000076272|miRNA|mmu-mir-666 [Source:miRBase;Acc:MI0004553] ## {Repeats: trf 0 class=trf} ## {MIR: mmu-mir-666}