========== block328358 (miRBase rno-mir-194-1) [miRNAknown_lenNOK_cloningHIGH_randfoldOK] ========== #randfold block328358: 0.001 randfold humanZ1p1_block328358: 0.001 randfold mouseZ1p1_block328358: 0.001 #forester humanZ1p1_block328358: 0.745686 forester mouseZ1p1_block328358: 0.894568 #identity: 90.16 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT2S2 18 2161 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT2S2 20 2130 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT2S1 20 1982 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT5S2 20 1401 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT5S2 18 1306 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT2S1 18 1298 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT5S2 21 1184 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT2S2 21 1074 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT5S2 23 766 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT2S1 21 747 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT5S1 18 703 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT5S1 20 674 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT2S2 19 661 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT2S1 19 499 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT5S2 19 451 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT2S2 22 410 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT2S2 23 367 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT2S1 23 325 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT5S1 19 256 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT5S2 22 214 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT2S1 22 207 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT5S1 21 143 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT1S1 21 138 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT1S1 20 134 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT5S1 23 126 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT5S1 22 124 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT1S1 18 118 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT1S1 19 58 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT1S2 18 48 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT3S1 18 43 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT1S2 20 43 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT3S2 20 34 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT4S2 18 33 block328358 GTAACAGCAACTCCATGTG #rat_gr627235_libT2S1 19 33 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT3S1 20 31 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT3S1 21 31 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT4S2 20 30 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT3S2 18 29 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT1S1 23 29 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT3S2 21 28 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT1S2 21 26 block328358 GTAACAGCAACTCCATGTG #rat_gr627235_libT2S2 19 26 block328358 GTAACAGCAACTCCATGTGG #rat_gr627236_libT5S2 20 23 block328358 TGTAACAGCAACTCCATGTG #rat_gr1074506_libT4S1 20 22 block328358 GTAACAGCAACTCCATGTG #rat_gr627235_libT5S2 19 21 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT4S2 21 16 block328358 GTAACAGCAACTCCATGTGG #rat_gr627236_libT2S2 20 16 block328358 GTAACAGCAACTCCATGTGG #rat_gr627236_libT2S1 20 15 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT3S1 19 14 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT4S2 19 14 block328358 TGTAACAGCAACTCCATG #rat_gr1074504_libT4S1 18 13 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT3S2 23 13 block328358 GTAACAGCAACTCCATGTGGAC #rat_gr627239_libT5S2 22 13 block328358 TGTAACAGCAACTCCATGTGG #rat_gr1074507_libT4S1 21 11 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT1S1 22 11 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT1S2 23 11 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT3S1 23 11 block328358 TGTAACAGCAACTCCATGTGGACT #rat_gr1074514_libT2S2 24 11 block328358 GTAACAGCAACTCCATGT #rat_gr627234_libT2S1 18 11 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT3S2 19 10 block328358 GTAACAGCAACTCCATGTGGAC #rat_gr627239_libT2S1 22 10 block328358 TGTAACAGCAACTCCATGT #rat_gr1074505_libT1S2 19 7 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT1S2 22 7 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT3S1 22 7 block328358 TGTAACAGCAACTCCATGTGGACT #rat_gr1074514_libT5S1 24 6 block328358 GTAACAGCAACTCCATGTG #rat_gr627235_libT5S1 19 6 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT3S2 22 5 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT4S2 23 5 block328358 GTAACAGCAACTCCATGT #rat_gr627234_libT5S2 18 5 block328358 GTAACAGCAACTCCATGTGGA #rat_gr627237_libT2S2 21 5 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT4S2 22 4 block328358 GTAACAGCAACTCCATGTGGAC #rat_gr627239_libT2S2 22 4 block328358 TGTAACAGCAACTCCATGTGGACT #rat_gr1074514_libT2S1 24 3 block328358 TGTAACAGCAACTCCATGTGGACT #rat_gr1074514_libT5S2 24 3 block328358 GTAACAGCAACTCCATGT #rat_gr627234_libT2S2 18 3 block328358 GTAACAGCAACTCCATGTGGA #rat_gr627237_libT2S1 21 3 block328358 GTAACAGCAACTCCATGTGGA #rat_gr627237_libT5S2 21 3 block328358 GTAACAGCAACTCCATGTG #rat_gr627235_libT1S1 19 2 block328358 GTGTAACAGCAACTCCAT #rat_gr652981_libT2S1 18 1 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libMirbase_rno-miR-194 22 1 block328358 TGTAACAGCAACTCCATGTGGA #rat_gr1074508_libT4S1 22 1 block328358 TGTAACAGCAACTCCATGTGGAC #rat_gr1074513_libT4S1 23 1 block328358 TGTAACAGCAACTCCATGTGGACT #rat_gr1074514_libT4S1 24 1 block328358 GTAACAGCAACTCCATGT #rat_gr627234_libT1S1 18 1 block328358 GTAACAGCAACTCCATGT #rat_gr627234_libT5S1 18 1 block328358 GTAACAGCAACTCCATGTG #rat_gr627235_libT4S1 19 1 block328358 GTAACAGCAACTCCATGTGG #rat_gr627236_libT1S1 20 1 block328358 GTAACAGCAACTCCATGTGGA #rat_gr627237_libT3S1 21 1 block328358 GTAACAGCAACTCCATGTGGA #rat_gr627237_libT5S1 21 1 block328358 TAACAGCAACTCCATGTGG #rat_gr713970_libT2S2 19 1 block328358 TAACAGCAACTCCATGTGG #rat_gr713970_libT5S2 19 1 block328358 AACAGCAACTCCATGTGGAC #rat_gr27172_libT2S1 20 1 block328358 -------------ATGGAGTCATCACGTGTAACAGCAACTCCATGTGGACTGTGCACAGA-TCCCAGTGGAGCTGCTGTTACTTTTGATGGCCTCCA------------------- humanZ1p1 CCTTATATGTTTAATGGTGTTATCAAGTGTAACAGCAACTCCATGTGGACTGTGTACCAATTTCCAGTGGAGATGCTGTTACTTTTGATGGTTACCAACTTGCTACAATATAAAGG mouseZ1p1 ---------------------------TGTAACAGCAACTCCATGTGGACTGTGCTCGGA-TTCCAGTGGAGCTGCTGTTACT--------------------------------- *************************** * * * ********* ********** block328358 ----- ----------------------------------------------- ------------------------------------ ----- #ENSRNOT00000057395 ENSRNOG00000002368 Iars2 block328358 ----- ----------------------------------------------- ------------------------------------ ----- #ENSRNOT00000057394 ENSRNOG00000002368 Iars2 block328358 ----- ----------------------------------------------- ------------------------------------ ----- #ENSRNOT00000057393 ENSRNOG00000002368 Iars2 block328358 ----- ----------------------------------------------- ------------------------------------ ----- #ENSRNOT00000003222 ENSRNOG00000002368 Iars2 block328358 ----- ----------------------------------------------- ------------------------------------ ----- #ENSRNOT00000057392 ENSRNOG00000002368 Iars2 block328358 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053605 ENSRNOG00000035482 rno-mir-194-1 block328358 .(((((((((((...(((((((((.((((((..((((((....))). )))..)))))).)))))))))...)))))).))))) 1.000 -44.70 # humanZ1p1 ((((((((((.((((((((..((((((.(((((((((.((((((.((((..((......)).)))))))))).))))))))).))))))...)))))..)))..))).))))).)) 0.993 -40.40 # mouseZ1p1 .(((((((((.((((((.(((((((....))). .)))))))))).))))))))). 1.000 -28.40 # #block328358 chromosome:13:101312447:101312529:1 Opposite_strand|Intronic_coding|ENSRNOT00000003222|ENSRNOG00000002368 ## Same_strand|Exonic_non-coding|ENSRNOT00000053605|ENSRNOG00000035482 ## ENSRNOG00000002368|protein_coding|Iars2|isoleucine-tRNA synthetase 2, mitochondrial Gene [Source:MGI (curated);Acc:Iars2-001] ## ENSRNOG00000035482|miRNA|rno-mir-194-1|rno-mir-194-1 [Source:miRBase;Acc:MI0000937] ## {MIR: rno-mir-194-1} #humanZ1p1 chromosome:1:218358104:218358219:-1 Opposite_strand|Intronic_coding|ENST00000302637|ENSG00000067704|protein_coding|Isoleucyl-tRNA synthetase, mitochondrial Precursor (EC 6.1.1.5)(Isoleucine--tRNA ligase)(IleRS) [Source:UniProtKB/Swiss-Prot;Acc:Q9NSE4] ## Same_strand|Boundary_non-coding|ENST00000384892|ENSG00000207624|miRNA|hsa-mir-194-1 [Source:miRBase;Acc:MI0000488] ## {MIR: hsa-mir-194-1} #mouseZ1p1 chromosome:1:187137170:187137292:1 Opposite_strand|Intronic_coding|ENSMUST00000027921|ENSMUSG00000026618|protein_coding|isoleucine-tRNA synthetase 2, mitochondrial Gene [Source:MGI (curated);Acc:Iars2-001] ## Same_strand|Boundary_non-coding|ENSMUST00000083647|ENSMUSG00000065581|miRNA|mmu-mir-194-1 [Source:miRBase;Acc:MI0000236] ## {MIR: mmu-mir-194-1} ========== block2895941 (miRBase rno-mir-880) [miRNAknown_lenNOK_cloningHIGH_randfoldOK] ========== #randfold block2895941: 0.002 randfold mouseZ14p1_block2895941: 0.003 #forester mouseZ14p1_block2895941: 0.803986 #identity: 89.74 block2895941 TACTCCATTCATTCTGAG #rat_gr754482_libT5S1 18 13 block2895941 TACTCCATTCATTCTGAGTAG #rat_gr754485_libT5S1 21 8 block2895941 TACTCCATTCATTCTGAGTA #rat_gr754484_libT5S1 20 5 block2895941 TACTCCATTCATTCTGAGTAGA #rat_gr754486_libT1S2 22 4 block2895941 TACTCCATTCATTCTGAGTAGA #rat_gr754486_libT5S1 22 4 block2895941 TACTCCATTCATTCTGAGT #rat_gr754483_libT5S1 19 4 block2895941 TACTCCATTCATTCTGAGTA #rat_gr754484_libT1S1 20 3 block2895941 TACTCCATTCATTCTGAGTAG #rat_gr754485_libT1S1 21 2 block2895941 TACTCCATTCATTCTGAGTAG #rat_gr754485_libT1S2 21 2 block2895941 TACTCCATTCATTCTGAG #rat_gr754482_libT2S1 18 2 block2895941 TACTCCATTCATTCTGAGTAGA #rat_gr754486_libMirbase_rno-miR-880 22 1 block2895941 ACTCCATTCATTCTGAGTAG #rat_gr118379_libT5S1 20 1 block2895941 TACTCCATTCATTCTGAGT #rat_gr754483_libT1S2 19 1 block2895941 TACTCCATTCATTCTGAG #rat_gr754482_libT3S2 18 1 block2895941 -------------------TGCACTGCAATACTCAGATTGGTATGAGTCACTTCCTAAAACATGTTACTCCATTCATTCTGAGTAGAGCAAGGCACA---------------- mouseZ14p1 CATCACTGAACAAACTGTGTGCACTGCAATACTCAGATTGATATGAGTCACTTCCTATTGCATGTTACTCCATCCTCTCTGAGTAGAGTAAGGCACACCAATCACCAGTTTTG ********************* **************** ************* * *********** ******** block2895941 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000062963 ENSRNOG00000041210 rno-mir-880 block2895941 (((..(((..((((((((.(((...((((.((............)).))))...))).))))))))..)))..))).. 1.000 -26.80 # mouseZ14p1 ((..((((........((((((..(((..((((((((..(((..((((.((............)).)))).)))...))))))))..)))..)))))).......))))..)) 0.995 -31.76 # #block2895941 chromosome:X:152850266:152850343:-1 Same_strand|Exonic_non-coding|ENSRNOT00000062963|ENSRNOG00000041210 ## ENSRNOG00000041210|miRNA|rno-mir-880|rno-mir-880 [Source:miRBase;Acc:MI0006122] ## {MIR: rno-mir-880} #mouseZ14p1 chromosome:X:64053689:64053801:-1 Same_strand|Boundary_non-coding|ENSMUST00000104809|ENSMUSG00000078002|miRNA|mmu-mir-880 [Source:miRBase;Acc:MI0005473] ## {MIR: mmu-mir-880} ========== sblock10437 (miRBase rno-mir-673) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10437: 0.003 #forester #identity: 0.00 sblock10437 CTCACAGCTCCGGTCCTTGGA #rat_gr417295_libT1S1 21 8 sblock10437 CTCACAGCTCCGGTCCTTG #rat_gr417293_libT1S1 19 7 sblock10437 CTCACAGCTCCGGTCCTTGGA #rat_gr417295_libT1S2 21 7 sblock10437 CTCACAGCTCCGGTCCTT #rat_gr417292_libT1S2 18 4 sblock10437 CTCACAGCTCCGGTCCTTGG #rat_gr417294_libT1S2 20 4 sblock10437 CTCACAGCTCCGGTCCTT #rat_gr417292_libT1S1 18 2 sblock10437 CTCACAGCTCCGGTCCTTG #rat_gr417293_libT1S2 19 2 sblock10437 CTCACAGCTCCGGTCCTTG #rat_gr417293_libT3S2 19 1 sblock10437 CTCACAGCTCCGGTCCTTGGAG #rat_gr417296_libMirbase_rno-miR-673 22 1 sblock10437 CTCACAGCTCCGGTCCTTGGAG #rat_gr417296_libT1S1 22 1 sblock10437 CTCACAGCTCCGGTCCTTGGAG #rat_gr417296_libT1S2 22 1 sblock10437 CTCACAGCTCCGGTCCTTGGAG #rat_gr417296_libT4S1 22 1 sblock10437 TCCGGGACTGAGTTCTGTGCACC #rat_gr868057_libT1S1 23 34 sblock10437 TCCGGGACTGAGTTCTGTGCACC #rat_gr868057_libT1S2 23 15 sblock10437 TCCGGGACTGAGTTCTGTGCAC #rat_gr868056_libT1S1 22 11 sblock10437 TCCGGGACTGAGTTCTGT #rat_gr868052_libT1S2 18 8 sblock10437 TCCGGGACTGAGTTCTGTG #rat_gr868053_libT1S1 19 7 sblock10437 TCCGGGACTGAGTTCTGTGCAC #rat_gr868056_libT1S2 22 6 sblock10437 TCCGGGACTGAGTTCTGT #rat_gr868052_libT1S1 18 5 sblock10437 TCCGGGACTGAGTTCTGTGCA #rat_gr868055_libT1S1 21 5 sblock10437 TCCGGGACTGAGTTCTGTGCACCC #rat_gr868058_libT1S2 24 5 sblock10437 TCCGGGACTGAGTTCTGTG #rat_gr868053_libT1S2 19 4 sblock10437 TCCGGGACTGAGTTCTGTGC #rat_gr868054_libT1S2 20 4 sblock10437 TCCGGGACTGAGTTCTGTGC #rat_gr868054_libT1S1 20 3 sblock10437 TCCGGGACTGAGTTCTGTGCACCC #rat_gr868058_libT1S1 24 3 sblock10437 TCCGGGACTGAGTTCTGTGCA #rat_gr868055_libT1S2 21 2 sblock10437 CTCCGGGACTGAGTTCTG #rat_gr424863_libT1S2 18 1 sblock10437 TCCGGGACTGAGTTCTGTG #rat_gr868053_libT2S1 19 1 sblock10437 TCCGGGACTGAGTTCTGTGCACCCC #rat_gr868059_libT1S1 25 1 sblock10437 TCCGGGACTGAGTTCTGTGCACCCC #rat_gr868059_libT1S2 25 1 sblock10437 gcctgaggggctcacagctccggtccttggagctccagagaaaatgttgcTCCGGGACTGAGTTCTGTGCACCccccttgccc *********************************************************************************** sblock10437 .....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>..... #ENSRNOT00000062107 ENSRNOG00000040354 rno-mir-673 sblock10437 ((..(.((((..(((((..((((((((.(((((..((.......))..)))))))))))).)..)))))..)))).)..)).. 1.000 -39.50 # #sblock10437 chromosome:6:134149777:134149859:1 Same_strand|Exonic_non-coding|ENSRNOT00000062107|ENSRNOG00000040354 ## ENSRNOG00000040354|miRNA|rno-mir-673|rno-mir-673 [Source:miRBase;Acc:MI0006158] ## {MIR: rno-mir-673} ========== sblock10440 (miRBase rno-mir-540) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10440: 0.001 randfold mouseZ14p82_sblock10440: 0.001 #forester mouseZ14p82_sblock10440: 1 #identity: 100.00 sblock10440 CAAGGGTCACCCTCTGACTCTGT #rat_gr271312_libT1S1 23 9 sblock10440 CAAGGGTCACCCTCTGACTCTGT #rat_gr271312_libT1S2 23 5 sblock10440 CAAGGGTCACCCTCTGAC #rat_gr271309_libT1S1 18 1 sblock10440 CAAGGGTCACCCTCTGAC #rat_gr271309_libT1S2 18 1 sblock10440 CAAGGGTCACCCTCTGACTC #rat_gr271310_libT1S1 20 1 sblock10440 CAAGGGTCACCCTCTGACTC #rat_gr271310_libT1S2 20 1 sblock10440 CAAGGGTCACCCTCTGACTCTG #rat_gr271311_libT1S1 22 1 sblock10440 CAAGGGTCACCCTCTGACTCTG #rat_gr271311_libT1S2 22 1 sblock10440 CAAGGGTCACCCTCTGACTCTG #rat_gr271311_libT3S2 22 1 sblock10440 CAAGGGTCACCCTCTGACTCTGT #rat_gr271312_libT3S1 23 1 sblock10440 AGGTCAGAGGTCGATCCTG #rat_gr191067_libT1S1 19 18 sblock10440 AGGTCAGAGGTCGATCCTG #rat_gr191067_libT1S2 19 17 sblock10440 AGGTCAGAGGTCGATCCTGG #rat_gr191068_libT1S1 20 10 sblock10440 AGGTCAGAGGTCGATCCTGG #rat_gr191068_libT1S2 20 9 sblock10440 AGGTCAGAGGTCGATCCT #rat_gr191065_libT1S2 18 6 sblock10440 AGGTCAGAGGTCGATCCTGGG #rat_gr191069_libT1S1 21 6 sblock10440 AGGTCAGAGGTCGATCCT #rat_gr191065_libT1S1 18 5 sblock10440 AGGTCAGAGGTCGATCCTGGGCC #rat_gr191071_libT1S1 23 4 sblock10440 AGGTCAGAGGTCGATCCTGGGCC #rat_gr191071_libT1S2 23 4 sblock10440 AGGTCAGAGGTCGATCCTGGGC #rat_gr191070_libT1S2 22 3 sblock10440 AGGTCAGAGGTCGATCCTGGGC #rat_gr191070_libT1S1 22 2 sblock10440 AGGTCAGAGGTCGATCCTG #rat_gr191067_libT3S2 19 1 sblock10440 AGGTCAGAGGTCGATCCTGG #rat_gr191068_libMirbase_rno-miR-540 20 1 sblock10440 AGGTCAGAGGTCGATCCTGGG #rat_gr191069_libT1S2 21 1 sblock10440 AGGTCAGAGGTCGATCCTGGGC #rat_gr191070_libT3S2 22 1 sblock10440 --------------CCCTGGGGCTGGGCCAAGGGTCACCCTCTGACTCTGTGGCCAAGGGTAGACAGGTCAGAGGTCGATCCTGGGCCTACTCTGGGG-------------- mouseZ14p82 CCTGGTGGGACATTCCCTGGGGCTGGGCCAAGGGTCACCCTCTGACTCTGTGGCCAAGGGTAGACAGGTCAGAGGTCGATCCTGGGCCTACTCTGGGGCTCCTCCCACTGGG ************************************************************************************ sblock10440 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000054607 ENSRNOG00000036499 rno-mir-540 sblock10440 (((..(((.((((((.((((((..((((((((.((((.(((...)))..))))))))))))..)))))).)))))))))..))) 1.000 -55.30 # mouseZ14p82 ((..((((((....(((..(((.((((((.((((((..((((((((.((((.(((...)))..))))))))))))..)))))).)))))))))..)))....))))))..)) 1.000 -73.10 # #sblock10440 chromosome:6:134177033:134177116:1 Same_strand|Exonic_non-coding|ENSRNOT00000054607|ENSRNOG00000036499 ## ENSRNOG00000036499|miRNA|rno-mir-540|rno-mir-540 [Source:miRBase;Acc:MI0003524] ## {MIR: rno-mir-540} #mouseZ14p82 chromosome:12:110824267:110824378:1 Same_strand|Boundary_non-coding|ENSMUST00000102167|ENSMUSG00000072900|miRNA|mmu-mir-540 [Source:miRBase;Acc:MI0003518] ## {MIR: mmu-mir-540} ========== sblock10442 (miRBase rno-mir-433) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10442: 0.003 randfold humanZ21p82_sblock10442: 0.011 randfold mouseZ25p82_sblock10442: 0.011 #forester humanZ21p82_sblock10442: 1 forester mouseZ25p82_sblock10442: 1 #identity: 100.00 sblock10442 TACGGTGAGCCTGTCATTAT #rat_gr753189_libT1S1 20 26 sblock10442 TACGGTGAGCCTGTCATTATTC #rat_gr753191_libT1S1 22 22 sblock10442 TACGGTGAGCCTGTCATTATTC #rat_gr753191_libT1S2 22 22 sblock10442 TACGGTGAGCCTGTCATTA #rat_gr753188_libT1S1 19 20 sblock10442 TACGGTGAGCCTGTCATTA #rat_gr753188_libT1S2 19 20 sblock10442 TACGGTGAGCCTGTCATTAT #rat_gr753189_libT1S2 20 17 sblock10442 TACGGTGAGCCTGTCATT #rat_gr753187_libT1S1 18 10 sblock10442 TACGGTGAGCCTGTCATT #rat_gr753187_libT1S2 18 5 sblock10442 TACGGTGAGCCTGTCATTATT #rat_gr753190_libT1S1 21 2 sblock10442 TACGGTGAGCCTGTCATTA #rat_gr753188_libT5S1 19 1 sblock10442 TACGGTGAGCCTGTCATTA #rat_gr753188_libT5S2 19 1 sblock10442 TACGGTGAGCCTGTCATTAT #rat_gr753189_libT3S2 20 1 sblock10442 ACGGTGAGCCTGTCATTAT #rat_gr113488_libT1S1 19 1 sblock10442 ATCATGATGGGCTCCTCG #rat_gr217426_libT1S1 18 110 sblock10442 ATCATGATGGGCTCCTCGG #rat_gr217427_libT1S1 19 108 sblock10442 ATCATGATGGGCTCCTCGGTGT #rat_gr217430_libT1S2 22 72 sblock10442 ATCATGATGGGCTCCTCG #rat_gr217426_libT1S2 18 70 sblock10442 ATCATGATGGGCTCCTCGGT #rat_gr217428_libT1S1 20 67 sblock10442 ATCATGATGGGCTCCTCGGTGT #rat_gr217430_libT1S1 22 58 sblock10442 ATCATGATGGGCTCCTCGGT #rat_gr217428_libT1S2 20 57 sblock10442 ATCATGATGGGCTCCTCGG #rat_gr217427_libT1S2 19 52 sblock10442 ATCATGATGGGCTCCTCGGTG #rat_gr217429_libT1S1 21 27 sblock10442 ATCATGATGGGCTCCTCGGTG #rat_gr217429_libT1S2 21 22 sblock10442 TCATGATGGGCTCCTCGGTGT #rat_gr823939_libT1S2 21 10 sblock10442 TCATGATGGGCTCCTCGGTG #rat_gr823938_libT1S1 20 7 sblock10442 TCATGATGGGCTCCTCGGT #rat_gr823937_libT1S1 19 6 sblock10442 GATCATGATGGGCTCCTCG #rat_gr519969_libT1S1 19 4 sblock10442 TCATGATGGGCTCCTCGGTGT #rat_gr823939_libT1S1 21 4 sblock10442 ATCATGATGGGCTCCTCGGTGTTC #rat_gr217432_libT1S2 24 3 sblock10442 TCATGATGGGCTCCTCGG #rat_gr823936_libT1S1 18 3 sblock10442 TCATGATGGGCTCCTCGG #rat_gr823936_libT1S2 18 3 sblock10442 TCATGATGGGCTCCTCGGT #rat_gr823937_libT1S2 19 3 sblock10442 TCATGATGGGCTCCTCGGTG #rat_gr823938_libT1S2 20 3 sblock10442 GATCATGATGGGCTCCTC #rat_gr519968_libT1S2 18 2 sblock10442 GATCATGATGGGCTCCTCGG #rat_gr519970_libT1S1 20 2 sblock10442 GATCATGATGGGCTCCTCGGTG #rat_gr519971_libT1S1 22 2 sblock10442 GATCATGATGGGCTCCTCGGTGT #rat_gr519972_libT1S2 23 2 sblock10442 ATCATGATGGGCTCCTCGGTGTTC #rat_gr217432_libT1S1 24 2 sblock10442 TCATGATGGGCTCCTCGGTGTT #rat_gr823940_libT1S2 22 2 sblock10442 CATGATGGGCTCCTCGGT #rat_gr311879_libT1S2 18 2 sblock10442 CATGATGGGCTCCTCGGTGT #rat_gr311881_libT1S2 20 2 sblock10442 GATCATGATGGGCTCCTC #rat_gr519968_libT1S1 18 1 sblock10442 GATCATGATGGGCTCCTCGG #rat_gr519970_libT1S2 20 1 sblock10442 ATCATGATGGGCTCCTCG #rat_gr217426_libT3S2 18 1 sblock10442 ATCATGATGGGCTCCTCG #rat_gr217426_libT4S1 18 1 sblock10442 ATCATGATGGGCTCCTCGG #rat_gr217427_libT3S1 19 1 sblock10442 ATCATGATGGGCTCCTCGGT #rat_gr217428_libT5S1 20 1 sblock10442 ATCATGATGGGCTCCTCGGTGT #rat_gr217430_libMirbase_rno-miR-433 22 1 sblock10442 ATCATGATGGGCTCCTCGGTGTT #rat_gr217431_libT1S2 23 1 sblock10442 ATCATGATGGGCTCCTCGGTGTTC #rat_gr217432_libT2S1 24 1 sblock10442 TCATGATGGGCTCCTCGGTGTTC #rat_gr823941_libT1S2 23 1 sblock10442 CATGATGGGCTCCTCGGTG #rat_gr311880_libT1S1 19 1 sblock10442 CATGATGGGCTCCTCGGTG #rat_gr311880_libT1S2 19 1 sblock10442 CATGATGGGCTCCTCGGTGT #rat_gr311881_libT1S1 20 1 sblock10442 CCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGG humanZ21p82 ---------AGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGT-------- mouseZ25p82 ---------AGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGT-------- **************************************************************************** sblock10442 .....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>..... #ENSRNOT00000054605 ENSRNOG00000036497 rno-mir-433 sblock10442 ((..((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).)) 1.000 -38.20 # humanZ21p82 ....(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).))).... 0.430 -27.60 # mouseZ25p82 ....(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).))).... 0.430 -27.60 # #sblock10442 chromosome:6:134183216:134183308:1 Same_strand|Exonic_non-coding|ENSRNOT00000054605|ENSRNOG00000036497 ## ENSRNOG00000036497|miRNA|rno-mir-433|rno-mir-433 [Source:miRBase;Acc:MI0001724] ## {MIR: rno-mir-433} #humanZ21p82 chromosome:14:100417956:100418088:1 Opposite_strand|Exonic_coding|ENST00000331067|ENSG00000185469|protein_coding|Retrotransposon-like protein 1 (Retrotransposon-derived protein PEG11)(Paternally expressed gene 11 protein)(Mammalian retrotransposon derived protein 1) [Source:UniProtKB/Swiss-Prot;Acc:A6NKG5] ## Same_strand|Boundary_non-coding|ENST00000384837|ENSG00000207569|miRNA|hsa-mir-433 [Source:miRBase;Acc:MI0001723] ## {MIR: hsa-mir-433} #mouseZ25p82 chromosome:12:110829908:110830040:1 Opposite_strand|Exonic_coding|ENSMUST00000118502|ENSMUSG00000081425|protein_coding|Retrotransposon-like protein 1 (Retrotransposon-derived protein PEG11)(Paternally expressed gene 11 protein)(Mammalian retrotransposon derived protein 1) [Source:UniProtKB/Swiss-Prot;Acc:Q7M732] ## Same_strand|Boundary_non-coding|ENSMUST00000093564|ENSMUSG00000070072|miRNA|mmu-mir-433 [Source:miRBase;Acc:MI0001525] ## {MIR: mmu-mir-433} ========== sblock10443 (miRBase rno-mir-127) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10443: 0.002 randfold humanZ23p82_sblock10443: 0.005 randfold mouseZ29p82_sblock10443: 0.021 #forester humanZ23p82_sblock10443: 0.91968 forester mouseZ29p82_sblock10443: 0.91968 #identity: 97.52 sblock10443 TTGATCACTGTCTCCAGCCTG #rat_gr1134413_libT1S1 21 1 sblock10443 TTGATCACTGTCTCCAGCCTGC #rat_gr1134414_libT1S1 22 1 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT1S1 22 461 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT1S1 24 427 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT1S2 24 370 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT1S2 22 335 sblock10443 GAAGCTCAGAGGGCTCTGA #rat_gr486771_libT1S1 19 217 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT1S1 22 214 sblock10443 CTGAAGCTCAGAGGGCTCTGA #rat_gr435056_libT1S1 21 208 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT1S2 22 203 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT1S1 19 190 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT1S2 19 148 sblock10443 CTGAAGCTCAGAGGGCTCTGA #rat_gr435056_libT1S2 21 133 sblock10443 GAAGCTCAGAGGGCTCTGAT #rat_gr486772_libT1S1 20 133 sblock10443 GAAGCTCAGAGGGCTCTGA #rat_gr486771_libT1S2 19 121 sblock10443 CTGAAGCTCAGAGGGCTC #rat_gr435053_libT1S1 18 102 sblock10443 CTGAAGCTCAGAGGGCTC #rat_gr435053_libT1S2 18 91 sblock10443 GAAGCTCAGAGGGCTCTGAT #rat_gr486772_libT1S2 20 56 sblock10443 CTGAAGCTCAGAGGGCTCTG #rat_gr435055_libT1S2 20 18 sblock10443 CTGAAGCTCAGAGGGCTCTG #rat_gr435055_libT1S1 20 16 sblock10443 TGAAGCTCAGAGGGCTCTGATTC #rat_gr927205_libT1S1 23 15 sblock10443 GAAGCTCAGAGGGCTCTG #rat_gr486770_libT1S1 18 13 sblock10443 GAAGCTCAGAGGGCTCTG #rat_gr486770_libT1S2 18 11 sblock10443 TGAAGCTCAGAGGGCTCTGATTC #rat_gr927205_libT1S2 23 10 sblock10443 GCTGAAGCTCAGAGGGCTCTGA #rat_gr571143_libT1S2 22 9 sblock10443 TGAAGCTCAGAGGGCTCTGA #rat_gr927202_libT1S2 20 9 sblock10443 TGAAGCTCAGAGGGCTCTGA #rat_gr927202_libT1S1 20 8 sblock10443 GCTGAAGCTCAGAGGGCTCT #rat_gr571141_libT1S2 20 7 sblock10443 GCTGAAGCTCAGAGGGCTCTGA #rat_gr571143_libT1S1 22 7 sblock10443 CTGAAGCTCAGAGGGCTCTGATT #rat_gr435058_libT1S1 23 7 sblock10443 TGCTGAAGCTCAGAGGGCTCTGA #rat_gr973356_libT1S1 23 6 sblock10443 GCTGAAGCTCAGAGGGCTCTGAT #rat_gr571144_libT1S1 23 6 sblock10443 GAAGCTCAGAGGGCTCTGATT #rat_gr486773_libT1S1 21 6 sblock10443 GCTGAAGCTCAGAGGGCTC #rat_gr571140_libT1S1 19 5 sblock10443 GCTGAAGCTCAGAGGGCTCT #rat_gr571141_libT1S1 20 5 sblock10443 TGAAGCTCAGAGGGCTCTGAT #rat_gr927203_libT1S1 21 5 sblock10443 GAAGCTCAGAGGGCTCTGA #rat_gr486771_libT4S1 19 5 sblock10443 GAAGCTCAGAGGGCTCTGA #rat_gr486771_libT5S2 19 5 sblock10443 GAAGCTCAGAGGGCTCTGATTCA #rat_gr486775_libT1S1 23 5 sblock10443 TGCTGAAGCTCAGAGGGCTCTGA #rat_gr973356_libT1S2 23 4 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT3S1 19 4 sblock10443 GAAGCTCAGAGGGCTCTGA #rat_gr486771_libT3S1 19 4 sblock10443 GAAGCTCAGAGGGCTCTGAT #rat_gr486772_libT3S1 20 4 sblock10443 GAAGCTCAGAGGGCTCTGATT #rat_gr486773_libT1S2 21 4 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT3S2 22 4 sblock10443 TGCTGAAGCTCAGAGGGCTC #rat_gr973353_libT1S1 20 3 sblock10443 GCTGAAGCTCAGAGGGCTCTGAT #rat_gr571144_libT1S2 23 3 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT3S1 22 3 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT3S1 24 3 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT3S2 24 3 sblock10443 AAGCTCAGAGGGCTCTGATTC #rat_gr48067_libT1S1 21 3 sblock10443 TGCTGAAGCTCAGAGGGC #rat_gr973351_libT1S2 18 2 sblock10443 TGCTGAAGCTCAGAGGGCTCT #rat_gr973354_libT1S2 21 2 sblock10443 CTGAAGCTCAGAGGGCTC #rat_gr435053_libT4S1 18 2 sblock10443 CTGAAGCTCAGAGGGCTC #rat_gr435053_libT4S2 18 2 sblock10443 CTGAAGCTCAGAGGGCTCTGA #rat_gr435056_libT3S2 21 2 sblock10443 CTGAAGCTCAGAGGGCTCTGA #rat_gr435056_libT4S2 21 2 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT3S2 22 2 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT5S2 22 2 sblock10443 TGAAGCTCAGAGGGCTCT #rat_gr927201_libT1S1 18 2 sblock10443 TGAAGCTCAGAGGGCTCTGAT #rat_gr927203_libT1S2 21 2 sblock10443 GAAGCTCAGAGGGCTCTGA #rat_gr486771_libT2S1 19 2 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT2S2 22 2 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT4S1 22 2 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT4S2 22 2 sblock10443 AAGCTCAGAGGGCTCTGA #rat_gr48065_libT1S1 18 2 sblock10443 AAGCTCAGAGGGCTCTGAT #rat_gr48066_libT1S1 19 2 sblock10443 AAGCTCAGAGGGCTCTGATTC #rat_gr48067_libT1S2 21 2 sblock10443 TGCTGAAGCTCAGAGGGC #rat_gr973351_libT1S1 18 1 sblock10443 TGCTGAAGCTCAGAGGGCT #rat_gr973352_libT1S1 19 1 sblock10443 TGCTGAAGCTCAGAGGGCT #rat_gr973352_libT1S2 19 1 sblock10443 TGCTGAAGCTCAGAGGGCTC #rat_gr973353_libT1S2 20 1 sblock10443 TGCTGAAGCTCAGAGGGCTCTG #rat_gr973355_libT1S1 22 1 sblock10443 TGCTGAAGCTCAGAGGGCTCTGAT #rat_gr973357_libT1S2 24 1 sblock10443 GCTGAAGCTCAGAGGGCT #rat_gr571139_libT1S2 18 1 sblock10443 GCTGAAGCTCAGAGGGCTC #rat_gr571140_libT1S2 19 1 sblock10443 GCTGAAGCTCAGAGGGCTCT #rat_gr571141_libT3S1 20 1 sblock10443 GCTGAAGCTCAGAGGGCTCTG #rat_gr571142_libT1S1 21 1 sblock10443 CTGAAGCTCAGAGGGCTC #rat_gr435053_libT3S2 18 1 sblock10443 CTGAAGCTCAGAGGGCTC #rat_gr435053_libT5S2 18 1 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT2S1 19 1 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT2S2 19 1 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT3S2 19 1 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT4S2 19 1 sblock10443 CTGAAGCTCAGAGGGCTCT #rat_gr435054_libT5S2 19 1 sblock10443 CTGAAGCTCAGAGGGCTCTG #rat_gr435055_libT3S2 20 1 sblock10443 CTGAAGCTCAGAGGGCTCTG #rat_gr435055_libT4S2 20 1 sblock10443 CTGAAGCTCAGAGGGCTCTGA #rat_gr435056_libT3S1 21 1 sblock10443 CTGAAGCTCAGAGGGCTCTGA #rat_gr435056_libT4S1 21 1 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT4S1 22 1 sblock10443 CTGAAGCTCAGAGGGCTCTGAT #rat_gr435057_libT4S2 22 1 sblock10443 CTGAAGCTCAGAGGGCTCTGATT #rat_gr435058_libT1S2 23 1 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT2S1 24 1 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT2S2 24 1 sblock10443 CTGAAGCTCAGAGGGCTCTGATTC #rat_gr435059_libT5S1 24 1 sblock10443 TGAAGCTCAGAGGGCTCTGATT #rat_gr927204_libT1S1 22 1 sblock10443 GAAGCTCAGAGGGCTCTG #rat_gr486770_libT3S1 18 1 sblock10443 GAAGCTCAGAGGGCTCTG #rat_gr486770_libT5S2 18 1 sblock10443 GAAGCTCAGAGGGCTCTGAT #rat_gr486772_libT5S2 20 1 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT2S1 22 1 sblock10443 GAAGCTCAGAGGGCTCTGATTC #rat_gr486774_libT5S1 22 1 sblock10443 GAAGCTCAGAGGGCTCTGATTCA #rat_gr486775_libT1S2 23 1 sblock10443 GAAGCTCAGAGGGCTCTGATTCA #rat_gr486775_libT3S1 23 1 sblock10443 AAGCTCAGAGGGCTCTGA #rat_gr48065_libT1S2 18 1 sblock10443 AAGCTCAGAGGGCTCTGAT #rat_gr48066_libT1S2 19 1 sblock10443 AAGCTCAGAGGGCTCTGATTCA #rat_gr48068_libT1S1 22 1 sblock10443 AAGCTCAGAGGGCTCTGATTCAG #rat_gr48069_libT1S2 23 1 sblock10443 AAGCTCAGAGGGCTCTGATTCAGA #rat_gr48070_libT1S1 24 1 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT1S1 19 2500 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT1S2 19 1839 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT1S1 21 1522 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT1S1 22 1499 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT1S1 20 1398 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT1S2 22 1321 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT1S2 21 1213 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT1S2 20 1073 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT1S1 18 880 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT1S2 18 583 sblock10443 ATCGGATCCGTCTGAGCTTGG #rat_gr222857_libT1S1 21 83 sblock10443 ATCGGATCCGTCTGAGCTTGG #rat_gr222857_libT1S2 21 56 sblock10443 CGGATCCGTCTGAGCTTG #rat_gr397613_libT1S1 18 42 sblock10443 ATCGGATCCGTCTGAGCTT #rat_gr222855_libT1S1 19 40 sblock10443 CGGATCCGTCTGAGCTTGGC #rat_gr397615_libT1S1 20 37 sblock10443 ATCGGATCCGTCTGAGCT #rat_gr222854_libT1S1 18 32 sblock10443 CGGATCCGTCTGAGCTTGGCT #rat_gr397616_libT1S1 21 32 sblock10443 ATCGGATCCGTCTGAGCTTG #rat_gr222856_libT1S1 20 30 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT3S2 19 29 sblock10443 CGGATCCGTCTGAGCTTGGC #rat_gr397615_libT1S2 20 29 sblock10443 ATCGGATCCGTCTGAGCTT #rat_gr222855_libT1S2 19 28 sblock10443 ATCGGATCCGTCTGAGCT #rat_gr222854_libT1S2 18 24 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT3S1 19 24 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT3S2 20 24 sblock10443 CGGATCCGTCTGAGCTTGG #rat_gr397614_libT1S1 19 24 sblock10443 ATCGGATCCGTCTGAGCTTG #rat_gr222856_libT1S2 20 23 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT3S2 21 23 sblock10443 CGGATCCGTCTGAGCTTG #rat_gr397613_libT1S2 18 23 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT5S2 19 21 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT3S2 22 20 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT4S1 19 18 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT3S1 22 18 sblock10443 CGGATCCGTCTGAGCTTGG #rat_gr397614_libT1S2 19 18 sblock10443 CGGATCCGTCTGAGCTTGGCT #rat_gr397616_libT1S2 21 18 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT5S2 22 16 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT3S2 18 14 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT5S2 20 14 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT3S1 21 14 sblock10443 ATCGGATCCGTCTGAGCTTGGC #rat_gr222858_libT1S1 22 12 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT4S1 21 12 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT5S2 21 12 sblock10443 ATCGGATCCGTCTGAGCTTGGC #rat_gr222858_libT1S2 22 11 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT4S2 19 11 sblock10443 TCGGATCCGTCTGAGCTTGGCTG #rat_gr889989_libT1S1 23 10 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT3S1 18 9 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT5S2 18 9 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT2S1 19 8 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT3S1 20 7 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT4S1 20 7 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT4S1 22 7 sblock10443 TCGGATCCGTCTGAGCTTGGCTG #rat_gr889989_libT1S2 23 7 sblock10443 GGATCCGTCTGAGCTTGGC #rat_gr590612_libT1S2 19 7 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT4S2 20 6 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT2S1 21 6 sblock10443 CATCGGATCCGTCTGAGCTTG #rat_gr310424_libT1S2 21 5 sblock10443 CATCGGATCCGTCTGAGCTTGGC #rat_gr310426_libT1S2 23 5 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT4S1 18 5 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT4S2 18 5 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT2S1 20 5 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT5S1 21 5 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT5S1 22 5 sblock10443 CATCGGATCCGTCTGAGCTT #rat_gr310423_libT1S2 20 4 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT2S2 19 4 sblock10443 TCGGATCCGTCTGAGCTTG #rat_gr889985_libT5S1 19 4 sblock10443 TCGGATCCGTCTGAGCTTGG #rat_gr889986_libT5S1 20 4 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT2S1 22 4 sblock10443 GGATCCGTCTGAGCTTGGC #rat_gr590612_libT1S1 19 4 sblock10443 CATCGGATCCGTCTGAGCTTG #rat_gr310424_libT1S1 21 3 sblock10443 CATCGGATCCGTCTGAGCTTGG #rat_gr310425_libT1S1 22 3 sblock10443 CATCGGATCCGTCTGAGCTTGGC #rat_gr310426_libT1S1 23 3 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libT4S2 22 3 sblock10443 GGATCCGTCTGAGCTTGGCT #rat_gr590613_libT1S1 20 3 sblock10443 GGATCCGTCTGAGCTTGGCTG #rat_gr590614_libT1S2 21 3 sblock10443 CATCGGATCCGTCTGAGCTT #rat_gr310423_libT1S1 20 2 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT2S1 18 2 sblock10443 TCGGATCCGTCTGAGCTT #rat_gr889984_libT5S1 18 2 sblock10443 TCGGATCCGTCTGAGCTTGGCTG #rat_gr889989_libT3S1 23 2 sblock10443 TCGGATCCGTCTGAGCTTGGCTGG #rat_gr889990_libT1S1 24 2 sblock10443 TCGGATCCGTCTGAGCTTGGCTGG #rat_gr889990_libT1S2 24 2 sblock10443 AGATCATCGGATCCGTCTGAG #rat_gr147141_libT1S2 21 1 sblock10443 CATCGGATCCGTCTGAGCT #rat_gr310422_libT1S1 19 1 sblock10443 CATCGGATCCGTCTGAGCT #rat_gr310422_libT1S2 19 1 sblock10443 CATCGGATCCGTCTGAGCTTGG #rat_gr310425_libT1S2 22 1 sblock10443 ATCGGATCCGTCTGAGCTT #rat_gr222855_libT4S1 19 1 sblock10443 ATCGGATCCGTCTGAGCTT #rat_gr222855_libT5S1 19 1 sblock10443 ATCGGATCCGTCTGAGCTTGG #rat_gr222857_libT3S1 21 1 sblock10443 ATCGGATCCGTCTGAGCTTGG #rat_gr222857_libT3S2 21 1 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT2S2 21 1 sblock10443 TCGGATCCGTCTGAGCTTGGC #rat_gr889987_libT4S2 21 1 sblock10443 TCGGATCCGTCTGAGCTTGGCT #rat_gr889988_libMirbase_rno-miR-127 22 1 sblock10443 TCGGATCCGTCTGAGCTTGGCTG #rat_gr889989_libT3S2 23 1 sblock10443 CGGATCCGTCTGAGCTTGG #rat_gr397614_libT3S2 19 1 sblock10443 CGGATCCGTCTGAGCTTGGCTG #rat_gr397617_libT1S1 22 1 sblock10443 CGGATCCGTCTGAGCTTGGCTGG #rat_gr397618_libT1S1 23 1 sblock10443 GGATCCGTCTGAGCTTGG #rat_gr590611_libT1S1 18 1 sblock10443 GGATCCGTCTGAGCTTGG #rat_gr590611_libT1S2 18 1 sblock10443 GATCCGTCTGAGCTTGGCT #rat_gr520425_libT1S1 19 1 sblock10443 TCCGTCTGAGCTTGGCTGG #rat_gr868684_libT1S1 19 1 sblock10443 -------------------TTTGATCACTGTCTCCAGCCTGCTGAAGCTCAGAGGGCTCTGATTCAGAAAGATCATCGGATCCGTCTGAGCTTGGCTGGTCGGAAGTCTCATCATC--------------- humanZ23p82 -ACTCGTAAAAGGTCTCGCTGTGATCACTGTCTCCAGCCTGCTGAAGCTCAGAGGGCTCTGATTCAGAAAGATCATCGGATCCGTCTGAGCTTGGCTGGTCGGAAGTCTCATCATCTGCTTCCTTCGGGT- mouseZ29p82 GACTCGTAAAAGACGCCGCTTTGATCACTGTCTCCAGCCTGCTGAAGCTCAGAGGGCTCTGATTCAGAAAGATCATCGGATCCGTCTGAGCTTGGCTGGTCGGAAGTCTCATCATCTGCCTCCCTCGGGTT * *********************************************************************************************** sblock10443 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000054604 ENSRNOG00000036496 rno-mir-127 sblock10443 ...(((..(((...((((((.....(((((((((.((.((((((((.....))..)))))).)).))))))))))))))).)))..)))........ 1.000 -39.80 # humanZ23p82 (((((...((((....((.(((((.(((...(((.(((.(((.(((((((((.((.((((((((.....))..)))))).)).)))))))))))).))).))))))...)))))..))..))))))))) 0.982 -49.60 # mouseZ29p82 ((((((.....((.((.....((((.(((...(((.(((.(((.(((((((((.((.((((((((.....))..)))))).)).)))))))))))).))).))))))...))))...)).))...)))))) 0.969 -46.70 # #sblock10443 chromosome:6:134184312:134184408:1 Same_strand|Exonic_non-coding|ENSRNOT00000054604|ENSRNOG00000036496 ## ENSRNOG00000036496|miRNA|rno-mir-127|rno-mir-127 [Source:miRBase;Acc:MI0000899] ## {MIR: rno-mir-127} #humanZ23p82 chromosome:14:100419051:100419179:1 Opposite_strand|Exonic_coding|ENST00000331067|ENSG00000185469|protein_coding|Retrotransposon-like protein 1 (Retrotransposon-derived protein PEG11)(Paternally expressed gene 11 protein)(Mammalian retrotransposon derived protein 1) [Source:UniProtKB/Swiss-Prot;Acc:A6NKG5] ## Same_strand|Boundary_non-coding|ENST00000384876|ENSG00000207608|miRNA|hsa-mir-127 [Source:miRBase;Acc:MI0000472] ## {SimpF: rank = 1 1 FirstEF,oe = 0.95 0 CpG} ## {MIR: hsa-mir-127} #mouseZ29p82 chromosome:12:110831023:110831153:1 Opposite_strand|Exonic_coding|ENSMUST00000118502|ENSMUSG00000081425|protein_coding|Retrotransposon-like protein 1 (Retrotransposon-derived protein PEG11)(Paternally expressed gene 11 protein)(Mammalian retrotransposon derived protein 1) [Source:UniProtKB/Swiss-Prot;Acc:Q7M732] ## Same_strand|Boundary_non-coding|ENSMUST00000093568|ENSMUSG00000070076|miRNA|mmu-mir-127 [Source:miRBase;Acc:MI0000154] ## {MIR: mmu-mir-127} ========== sblock10493 (miRBase rno-mir-758) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10493: 0.003 randfold humanZ39p82_sblock10493: 0.009 randfold mouseZ56p82_sblock10493: 0.005 #forester humanZ39p82_sblock10493: 0.770624 forester mouseZ56p82_sblock10493: 0.915837 #identity: 95.74 sblock10493 TGGTTGACCAGAGAGCACACGC #rat_gr1069406_libT1S1 22 5 sblock10493 TGGTTGACCAGAGAGCAC #rat_gr1069402_libT1S1 18 1 sblock10493 TGGTTGACCAGAGAGCACA #rat_gr1069403_libT1S1 19 1 sblock10493 TGGTTGACCAGAGAGCACA #rat_gr1069403_libT1S2 19 1 sblock10493 TGGTTGACCAGAGAGCACAC #rat_gr1069404_libT1S1 20 1 sblock10493 TGGTTGACCAGAGAGCACACG #rat_gr1069405_libT1S1 21 1 sblock10493 TTTGTGACCTGGTCCACTAACCC #rat_gr1173261_libT1S1 23 82 sblock10493 TTTGTGACCTGGTCCACTAACCC #rat_gr1173261_libT1S2 23 40 sblock10493 TTTGTGACCTGGTCCACTAA #rat_gr1173258_libT1S1 20 21 sblock10493 TTTGTGACCTGGTCCACTA #rat_gr1173257_libT1S2 19 20 sblock10493 TTTGTGACCTGGTCCACT #rat_gr1173256_libT1S1 18 14 sblock10493 TTTGTGACCTGGTCCACTA #rat_gr1173257_libT1S1 19 14 sblock10493 TTTGTGACCTGGTCCACT #rat_gr1173256_libT1S2 18 10 sblock10493 TTTGTGACCTGGTCCACTAA #rat_gr1173258_libT1S2 20 9 sblock10493 TTTGTGACCTGGTCCACTAACC #rat_gr1173260_libT1S1 22 8 sblock10493 TTTGTGACCTGGTCCACTAAC #rat_gr1173259_libT1S1 21 5 sblock10493 TTTGTGACCTGGTCCACTAAC #rat_gr1173259_libT1S2 21 5 sblock10493 TTTGTGACCTGGTCCACTAACCCTC #rat_gr1173263_libT1S1 25 5 sblock10493 TTGTGACCTGGTCCACTAACCC #rat_gr1149700_libT1S1 22 4 sblock10493 TTTGTGACCTGGTCCACTAACC #rat_gr1173260_libT1S2 22 3 sblock10493 TTTGTGACCTGGTCCACTAACCCTC #rat_gr1173263_libT1S2 25 2 sblock10493 TGTGACCTGGTCCACTAACCC #rat_gr1083487_libT1S1 21 2 sblock10493 TTTGTGACCTGGTCCACTA #rat_gr1173257_libT4S2 19 1 sblock10493 TTTGTGACCTGGTCCACTAACC #rat_gr1173260_libMirbase_rno-miR-758 22 1 sblock10493 TTTGTGACCTGGTCCACTAACCCT #rat_gr1173262_libT1S1 24 1 sblock10493 TTGTGACCTGGTCCACTAACC #rat_gr1149699_libT1S1 21 1 sblock10493 TTGTGACCTGGTCCACTAACCC #rat_gr1149700_libT5S1 22 1 sblock10493 TTGTGACCTGGTCCACTAACCCTC #rat_gr1149701_libT1S2 24 1 sblock10493 -----GGTGCGTGAGGTGGTTGACCAGAGAGCACACGCTATATTTGTGCCGTTTGTGACCTGGTCCACTAACCCTCAGTATCT----- humanZ39p82 GCCTGGATACATGAGATGGTTGACCAGAGAGCACACGCTTTATTTGTGCCGTTTGTGACCTGGTCCACTAACCCTCAGTATCTAATGC mouseZ56p82 ----GGGTGCGTGAGGTGGTTGACCAGAGAGCACACGCTATATTTGTGCCGTTTGTGACCTGGTCCACTAACCCTCAGTATCT----- * * * **** *********************** ******************************************* sblock10493 ...>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >.... #ENSRNOT00000062139 ENSRNOG00000040386 rno-mir-758 sblock10493 (((((.(((((((((.((((((...(((.(((.(((....))).))).)))...)))))).))))..)))))))))). 1.000 -30.90 # humanZ39p82 ...(((((((.((((.((((.((((((...(((.((((.........)).)).)))...)))))).))))...))))))))))).... 0.973 -29.40 # mouseZ56p82 ((((((.(((((((((.((((((...(((.(((.(((....))).))).)))...)))))).))))..))))))))))) 0.996 -31.30 # #sblock10493 chromosome:6:134391996:134392073:1 Same_strand|Exonic_non-coding|ENSRNOT00000062139|ENSRNOG00000040386 ## ENSRNOG00000040386|miRNA|rno-mir-758|rno-mir-758 [Source:miRBase;Acc:MI0006163] ## {MIR: rno-mir-758} #humanZ39p82 chromosome:14:100562110:100562197:1 Same_strand|Exonic_non-coding|ENST00000390227|ENSG00000211582|miRNA|hsa-mir-758 [Source:miRBase;Acc:MI0003757] ## {MIR: hsa-mir-758} #mouseZ56p82 chromosome:12:110951021:110951099:1 Same_strand|Exonic_non-coding|ENSMUST00000103260|ENSMUSG00000076459|miRNA|mmu-mir-758 [Source:miRBase;Acc:MI0004129] ## {MIR: mmu-mir-758} ========== sblock10494 (miRBase rno-mir-329) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10494: 0.001 randfold humanZ41p82_sblock10494: 0.001 randfold mouseZ58p82_sblock10494: 0.002 #forester humanZ41p82_sblock10494: 0.801799 forester mouseZ58p82_sblock10494: 1 #identity: 91.40 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT1S1 24 85 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT1S2 24 84 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT1S1 19 69 sblock10494 AGAGGTTTTCTGGGTCTCTGT #rat_gr145101_libT1S2 21 65 sblock10494 AGAGGTTTTCTGGGTCTC #rat_gr145098_libT1S1 18 58 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT1S2 19 56 sblock10494 AGAGGTTTTCTGGGTCTC #rat_gr145098_libT1S2 18 51 sblock10494 AGAGGTTTTCTGGGTCTCTGT #rat_gr145101_libT1S1 21 50 sblock10494 AGAGGTTTTCTGGGTCTCTG #rat_gr145100_libT1S1 20 36 sblock10494 AGAGGTTTTCTGGGTCTCTG #rat_gr145100_libT1S2 20 30 sblock10494 AGAGGTTTTCTGGGTCTCTGTT #rat_gr145102_libT1S1 22 18 sblock10494 AGAGGTTTTCTGGGTCTCTGTT #rat_gr145102_libT1S2 22 13 sblock10494 GAGGTTTTCTGGGTCTCTGTTTC #rat_gr515374_libT1S2 23 11 sblock10494 GAGGTTTTCTGGGTCTCTGTTTC #rat_gr515374_libT1S1 23 9 sblock10494 GAGGTTTTCTGGGTCTCTG #rat_gr515371_libT1S1 19 6 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT5S2 24 5 sblock10494 GAGGTTTTCTGGGTCTCTGTT #rat_gr515373_libT1S1 21 5 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT5S2 19 4 sblock10494 GAGGTTTTCTGGGTCTCT #rat_gr515370_libT1S1 18 4 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT3S1 19 3 sblock10494 AGAGGTTTTCTGGGTCTCTGTTT #rat_gr145103_libT1S2 23 3 sblock10494 GAGGTTTTCTGGGTCTCTG #rat_gr515371_libT1S2 19 3 sblock10494 GAGGTTTTCTGGGTCTCTGT #rat_gr515372_libT1S1 20 3 sblock10494 AGAGGTTTTCTGGGTCTCTG #rat_gr145100_libT5S2 20 2 sblock10494 AGAGGTTTTCTGGGTCTCTGT #rat_gr145101_libT5S2 21 2 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT3S1 24 2 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT3S2 24 2 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT5S1 24 2 sblock10494 GAGGTTTTCTGGGTCTCTGT #rat_gr515372_libT1S2 20 2 sblock10494 AGAGGTTTTCTGGGTCTC #rat_gr145098_libT3S2 18 1 sblock10494 AGAGGTTTTCTGGGTCTC #rat_gr145098_libT4S1 18 1 sblock10494 AGAGGTTTTCTGGGTCTC #rat_gr145098_libT5S2 18 1 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT3S2 19 1 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT4S1 19 1 sblock10494 AGAGGTTTTCTGGGTCTCT #rat_gr145099_libT5S1 19 1 sblock10494 AGAGGTTTTCTGGGTCTCTG #rat_gr145100_libT3S2 20 1 sblock10494 AGAGGTTTTCTGGGTCTCTG #rat_gr145100_libT4S1 20 1 sblock10494 AGAGGTTTTCTGGGTCTCTGT #rat_gr145101_libT3S1 21 1 sblock10494 AGAGGTTTTCTGGGTCTCTGT #rat_gr145101_libT3S2 21 1 sblock10494 AGAGGTTTTCTGGGTCTCTGTTT #rat_gr145103_libT1S1 23 1 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT4S1 24 1 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTC #rat_gr145104_libT4S2 24 1 sblock10494 AGAGGTTTTCTGGGTCTCTGTTTCT #rat_gr145105_libT1S2 25 1 sblock10494 GAGGTTTTCTGGGTCTCTGTT #rat_gr515373_libT1S2 21 1 sblock10494 AGGTTTTCTGGGTCTCTG #rat_gr194218_libT1S1 18 1 sblock10494 AGGTTTTCTGGGTCTCTGTTTC #rat_gr194219_libT1S1 22 1 sblock10494 AGGTTTTCTGGGTCTCTGTTTC #rat_gr194219_libT1S2 22 1 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT1S1 21 981 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT1S2 21 803 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT1S1 19 761 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT1S1 18 709 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT1S2 19 622 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT1S2 18 564 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT1S1 22 501 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT1S1 20 459 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT1S2 20 386 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT1S2 22 345 sblock10494 AACACACCCAGCTAACCTTTTTT #rat_gr25585_libT1S1 23 24 sblock10494 ACACACCCAGCTAACCTTTT #rat_gr72329_libT1S1 20 23 sblock10494 AACACACCCAGCTAACCTTTTTT #rat_gr25585_libT1S2 23 18 sblock10494 AAACACACCCAGCTAACCTT #rat_gr11463_libT1S1 20 15 sblock10494 ACACACCCAGCTAACCTTTT #rat_gr72329_libT1S2 20 15 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT5S2 19 13 sblock10494 ACACACCCAGCTAACCTTT #rat_gr72328_libT1S2 19 13 sblock10494 ACACACCCAGCTAACCTT #rat_gr72327_libT1S1 18 12 sblock10494 ACACACCCAGCTAACCTT #rat_gr72327_libT1S2 18 12 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT3S2 21 11 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT4S2 21 11 sblock10494 ACACACCCAGCTAACCTTTTT #rat_gr72330_libT1S1 21 11 sblock10494 AAACACACCCAGCTAACCT #rat_gr11462_libT1S1 19 10 sblock10494 AAACACACCCAGCTAACCTT #rat_gr11463_libT1S2 20 10 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT3S1 21 10 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT3S2 18 9 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT3S1 20 9 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT5S2 21 9 sblock10494 ACACACCCAGCTAACCTTT #rat_gr72328_libT1S1 19 9 sblock10494 AAACACACCCAGCTAACC #rat_gr11461_libT1S2 18 8 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT4S1 18 7 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT3S1 19 7 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT3S2 19 7 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT3S2 20 7 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT2S1 21 7 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT3S2 22 7 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT5S2 22 7 sblock10494 AACACACCCAGCTAACCTTTTTTT #rat_gr25586_libT1S2 24 7 sblock10494 AAACACACCCAGCTAACC #rat_gr11461_libT1S1 18 6 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT3S1 18 6 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT5S2 18 6 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT4S2 19 5 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT4S1 20 5 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT4S1 21 5 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT3S1 22 5 sblock10494 ACACACCCAGCTAACCTTTTT #rat_gr72330_libT1S2 21 5 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT2S1 18 4 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT5S1 18 4 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT5S1 19 4 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT2S2 21 4 sblock10494 AAACACACCCAGCTAACCT #rat_gr11462_libT1S2 19 3 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT2S1 19 3 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT2S2 19 3 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT4S2 20 3 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT5S1 20 3 sblock10494 AACACACCCAGCTAACCTTTT #rat_gr25583_libT5S1 21 3 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT4S1 22 3 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT4S2 22 3 sblock10494 AACACACCCAGCTAACCTTTTTTT #rat_gr25586_libT1S1 24 3 sblock10494 CACACCCAGCTAACCTTTT #rat_gr277051_libT1S1 19 3 sblock10494 AAACACACCCAGCTAACCTTT #rat_gr11464_libT1S1 21 2 sblock10494 AAACACACCCAGCTAACCTTTT #rat_gr11465_libT1S1 22 2 sblock10494 AACACACCCAGCTAACCT #rat_gr25580_libT4S2 18 2 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT2S2 20 2 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT5S1 22 2 sblock10494 AACACACCCAGCTAACCTTTTTT #rat_gr25585_libT5S1 23 2 sblock10494 TGAAACACACCCAGCTAAC #rat_gr921762_libT1S1 19 1 sblock10494 TGAAACACACCCAGCTAACCT #rat_gr921763_libT1S2 21 1 sblock10494 GAAACACACCCAGCTAACCTT #rat_gr478364_libT1S1 21 1 sblock10494 AAACACACCCAGCTAACCTT #rat_gr11463_libT3S2 20 1 sblock10494 AAACACACCCAGCTAACCTTTT #rat_gr11465_libT1S2 22 1 sblock10494 AACACACCCAGCTAACCTT #rat_gr25581_libT4S1 19 1 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT2S1 20 1 sblock10494 AACACACCCAGCTAACCTTT #rat_gr25582_libT5S2 20 1 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libMirbase_rno-miR-329 22 1 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT2S1 22 1 sblock10494 AACACACCCAGCTAACCTTTTT #rat_gr25584_libT2S2 22 1 sblock10494 AACACACCCAGCTAACCTTTTTT #rat_gr25585_libT3S1 23 1 sblock10494 AACACACCCAGCTAACCTTTTTT #rat_gr25585_libT4S2 23 1 sblock10494 AACACACCCAGCTAACCTTTTTTTC #rat_gr25587_libT1S2 25 1 sblock10494 ACACACCCAGCTAACCTT #rat_gr72327_libT3S1 18 1 sblock10494 ACACACCCAGCTAACCTTT #rat_gr72328_libT5S2 19 1 sblock10494 ACACACCCAGCTAACCTTTTTT #rat_gr72331_libT1S1 22 1 sblock10494 CACACCCAGCTAACCTTT #rat_gr277050_libT1S2 18 1 sblock10494 ACACCCAGCTAACCTTTT #rat_gr74090_libT2S1 18 1 sblock10494 TGTTCGCTTCTGGTACCGGAAGAGAGGTTTTCTGGGTCTCTGTTTCTTTGATGAGAATGAAACACACCCAGCTAACCTTTTTTTCAGTATCAAATCC humanZ41p82 --------------------AGAGAGGTTTTCTGGGTTTCTGTTTCTTTAATGAGGACGAAACACACCTGGTTAACCTCTTT--------------- mouseZ58p82 --------------------AGAGAGGTTTTCTGGGTCTCTGTTTCTTTGATGAGAATGAAACACACCCAGCTAACCTTTTT--------------- ***************** *********** ***** * ********** * ****** *** sblock10494 .....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>..... #ENSRNOT00000053610 ENSRNOG00000035487 rno-mir-329 sblock10494 ..........((((((.((((((((((((..((((((...(((((((((.....))).)))))).))))))..)))))))))))).))))))..... 1.000 -36.50 # humanZ41p82 (((((((((..((((((...((((((.((......)).)))))).))))))..))))))))) 1.000 -23.30 # mouseZ58p82 (((((((((..((((((...(((((((((.....))).)))))).))))))..))))))))) 1.000 -23.80 # #sblock10494 chromosome:6:134392666:134392762:1 Same_strand|Exonic_non-coding|ENSRNOT00000053610|ENSRNOG00000035487 ## ENSRNOG00000035487|miRNA|rno-mir-329|rno-mir-329 [Source:miRBase;Acc:MI0000604] ## {MIR: rno-mir-329} #humanZ41p82 chromosome:14:100562844:100562980:1 Same_strand|Boundary_non-coding|ENST00000385028|ENSG00000207761|miRNA|hsa-mir-329-1 [Source:miRBase;Acc:MI0001725] ## {MIR: hsa-mir-329-1} #mouseZ58p82 chromosome:12:110951671:110951807:1 Same_strand|Boundary_non-coding|ENSMUST00000083643|ENSMUSG00000065577|miRNA|mmu-mir-329 [Source:miRBase;Acc:MI0000605] ## {MIR: mmu-mir-329} ========== sblock10499 (miRBase rno-mir-543) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10499: 0.001 randfold humanZ2p83_sblock10499: 0.009 randfold mouseZ3p83_sblock10499: 0.001 #forester humanZ2p83_sblock10499: 0.883158 forester mouseZ3p83_sblock10499: 1 #identity: 94.78 sblock10499 AAGTTGCCCGCGTGTTTTTC #rat_gr57424_libT1S1 20 27 sblock10499 GAAGTTGCCCGCGTGTTTT #rat_gr488609_libT1S2 19 17 sblock10499 AAGTTGCCCGCGTGTTTTTCGC #rat_gr57426_libT1S1 22 15 sblock10499 AAGTTGCCCGCGTGTTTTTC #rat_gr57424_libT1S2 20 14 sblock10499 AGTTGCCCGCGTGTTTTTC #rat_gr203737_libT1S1 19 10 sblock10499 GAAGTTGCCCGCGTGTTTT #rat_gr488609_libT1S1 19 9 sblock10499 AGTTGCCCGCGTGTTTTTC #rat_gr203737_libT1S2 19 9 sblock10499 GAAGTTGCCCGCGTGTTTTTC #rat_gr488610_libT1S2 21 6 sblock10499 AAGTTGCCCGCGTGTTTT #rat_gr57422_libT1S1 18 6 sblock10499 AAGTTGCCCGCGTGTTTTTCGC #rat_gr57426_libT1S2 22 6 sblock10499 AGTTGCCCGCGTGTTTTTCGCT #rat_gr203740_libT1S1 22 6 sblock10499 AGTTGCCCGCGTGTTTTTCGCT #rat_gr203740_libT1S2 22 6 sblock10499 GAAGTTGCCCGCGTGTTT #rat_gr488608_libT1S1 18 5 sblock10499 AGTTGCCCGCGTGTTTTT #rat_gr203736_libT1S2 18 5 sblock10499 AGTTGCCCGCGTGTTTTTCGC #rat_gr203739_libT1S1 21 5 sblock10499 AGTTGCCCGCGTGTTTTTCGC #rat_gr203739_libT1S2 21 5 sblock10499 GAAGTTGCCCGCGTGTTTTTC #rat_gr488610_libT1S1 21 4 sblock10499 AAGTTGCCCGCGTGTTTT #rat_gr57422_libT1S2 18 4 sblock10499 TGAGAAGTTGCCCGCGTGTTT #rat_gr940119_libT1S1 21 3 sblock10499 GAAGTTGCCCGCGTGTTTTTCG #rat_gr488611_libT1S1 22 3 sblock10499 GAAGTTGCCCGCGTGTTT #rat_gr488608_libT1S2 18 2 sblock10499 AAGTTGCCCGCGTGTTTTTCG #rat_gr57425_libT1S1 21 2 sblock10499 AGTTGCCCGCGTGTTTTTCG #rat_gr203738_libT1S2 20 2 sblock10499 TGAGAAGTTGCCCGCGTGTTTT #rat_gr940120_libT1S1 22 1 sblock10499 TGAGAAGTTGCCCGCGTGTTTTTC #rat_gr940121_libT1S1 24 1 sblock10499 GAAGTTGCCCGCGTGTTTTTCGC #rat_gr488612_libT1S1 23 1 sblock10499 AAGTTGCCCGCGTGTTTT #rat_gr57422_libT4S1 18 1 sblock10499 AAGTTGCCCGCGTGTTTTT #rat_gr57423_libT1S2 19 1 sblock10499 AAGTTGCCCGCGTGTTTTTCGC #rat_gr57426_libMirbase_rno-miR-543 22 1 sblock10499 AGTTGCCCGCGTGTTTTT #rat_gr203736_libT1S1 18 1 sblock10499 TTGCCCGCGTGTTTTTCGC #rat_gr1136418_libT1S2 19 1 sblock10499 AAACATTCGCGGTGCACTTCTT #rat_gr12464_libT1S1 22 856 sblock10499 AAACATTCGCGGTGCACTTCTT #rat_gr12464_libT1S2 22 555 sblock10499 AAACATTCGCGGTGCACT #rat_gr12460_libT1S1 18 424 sblock10499 AAACATTCGCGGTGCACTTCT #rat_gr12463_libT1S1 21 399 sblock10499 AAACATTCGCGGTGCACTTC #rat_gr12462_libT1S1 20 395 sblock10499 AAACATTCGCGGTGCACT #rat_gr12460_libT1S2 18 334 sblock10499 AAACATTCGCGGTGCACTTCT #rat_gr12463_libT1S2 21 294 sblock10499 AAACATTCGCGGTGCACTTC #rat_gr12462_libT1S2 20 286 sblock10499 AAACATTCGCGGTGCACTTCTTT #rat_gr12465_libT1S1 23 108 sblock10499 AAACATTCGCGGTGCACTTCTTT #rat_gr12465_libT1S2 23 80 sblock10499 AAACATTCGCGGTGCACTT #rat_gr12461_libT1S1 19 76 sblock10499 AAACATTCGCGGTGCACTT #rat_gr12461_libT1S2 19 56 sblock10499 AACATTCGCGGTGCACTTCTT #rat_gr30449_libT1S1 21 10 sblock10499 CGAAACATTCGCGGTGCACTTC #rat_gr387621_libT1S1 22 8 sblock10499 AACATTCGCGGTGCACTTC #rat_gr30447_libT1S2 19 8 sblock10499 AACATTCGCGGTGCACTTCT #rat_gr30448_libT1S1 20 8 sblock10499 CGAAACATTCGCGGTGCACTTC #rat_gr387621_libT1S2 22 7 sblock10499 AACATTCGCGGTGCACTTC #rat_gr30447_libT1S1 19 7 sblock10499 AAACATTCGCGGTGCACTTCTTTT #rat_gr12466_libT1S2 24 6 sblock10499 AACATTCGCGGTGCACTTCTTT #rat_gr30450_libT1S1 22 6 sblock10499 CGAAACATTCGCGGTGCA #rat_gr387617_libT1S1 18 5 sblock10499 CGAAACATTCGCGGTGCACT #rat_gr387619_libT1S1 20 5 sblock10499 CGAAACATTCGCGGTGCACT #rat_gr387619_libT1S2 20 5 sblock10499 GAAACATTCGCGGTGCACT #rat_gr478635_libT1S1 19 5 sblock10499 AAACATTCGCGGTGCACTTCTTTT #rat_gr12466_libT1S1 24 5 sblock10499 ACATTCGCGGTGCACTTC #rat_gr85389_libT1S2 18 5 sblock10499 ACATTCGCGGTGCACTTCTTT #rat_gr85392_libT1S1 21 5 sblock10499 CGAAACATTCGCGGTGCA #rat_gr387617_libT1S2 18 4 sblock10499 CGAAACATTCGCGGTGCAC #rat_gr387618_libT1S1 19 4 sblock10499 CGAAACATTCGCGGTGCAC #rat_gr387618_libT1S2 19 4 sblock10499 CGAAACATTCGCGGTGCACTTCT #rat_gr387622_libT1S2 23 4 sblock10499 AACATTCGCGGTGCACTTCTT #rat_gr30449_libT1S2 21 4 sblock10499 GAAACATTCGCGGTGCAC #rat_gr478634_libT1S2 18 3 sblock10499 GAAACATTCGCGGTGCACT #rat_gr478635_libT1S2 19 3 sblock10499 AAACATTCGCGGTGCACTTCTT #rat_gr12464_libT5S2 22 3 sblock10499 AACATTCGCGGTGCACTTCTTT #rat_gr30450_libT1S2 22 3 sblock10499 GAAACATTCGCGGTGCACTTCT #rat_gr478637_libT1S1 22 2 sblock10499 AAACATTCGCGGTGCACT #rat_gr12460_libT5S2 18 2 sblock10499 AAACATTCGCGGTGCACTTC #rat_gr12462_libT3S2 20 2 sblock10499 AAACATTCGCGGTGCACTTCT #rat_gr12463_libT3S2 21 2 sblock10499 AAACATTCGCGGTGCACTTCTTTTT #rat_gr12467_libT1S2 25 2 sblock10499 AAACATTCGCGGTGCACTTCTTTTTC #rat_gr12468_libT1S1 26 2 sblock10499 AACATTCGCGGTGCACTTCT #rat_gr30448_libT1S2 20 2 sblock10499 ACATTCGCGGTGCACTTCT #rat_gr85390_libT1S2 19 2 sblock10499 CGAAACATTCGCGGTGCACTT #rat_gr387620_libT1S1 21 1 sblock10499 CGAAACATTCGCGGTGCACTTCT #rat_gr387622_libT1S1 23 1 sblock10499 GAAACATTCGCGGTGCAC #rat_gr478634_libT1S1 18 1 sblock10499 GAAACATTCGCGGTGCACTT #rat_gr478636_libT1S1 20 1 sblock10499 GAAACATTCGCGGTGCACTT #rat_gr478636_libT1S2 20 1 sblock10499 GAAACATTCGCGGTGCACTTCT #rat_gr478637_libT1S2 22 1 sblock10499 GAAACATTCGCGGTGCACTTCTT #rat_gr478638_libT1S2 23 1 sblock10499 AAACATTCGCGGTGCACT #rat_gr12460_libT5S1 18 1 sblock10499 AAACATTCGCGGTGCACTTC #rat_gr12462_libT2S1 20 1 sblock10499 AAACATTCGCGGTGCACTTC #rat_gr12462_libT4S1 20 1 sblock10499 AAACATTCGCGGTGCACTTCT #rat_gr12463_libMirbase_rno-miR-543* 21 1 sblock10499 AAACATTCGCGGTGCACTTCT #rat_gr12463_libT5S2 21 1 sblock10499 AAACATTCGCGGTGCACTTCTT #rat_gr12464_libT3S1 22 1 sblock10499 AAACATTCGCGGTGCACTTCTT #rat_gr12464_libT3S2 22 1 sblock10499 AAACATTCGCGGTGCACTTCTT #rat_gr12464_libT4S2 22 1 sblock10499 AAACATTCGCGGTGCACTTCTTT #rat_gr12465_libT4S1 23 1 sblock10499 AAACATTCGCGGTGCACTTCTTT #rat_gr12465_libT5S1 23 1 sblock10499 AAACATTCGCGGTGCACTTCTTTTT #rat_gr12467_libT1S1 25 1 sblock10499 AAACATTCGCGGTGCACTTCTTTTTC #rat_gr12468_libT1S2 26 1 sblock10499 AACATTCGCGGTGCACTT #rat_gr30446_libT1S1 18 1 sblock10499 AACATTCGCGGTGCACTTCTT #rat_gr30449_libT5S1 21 1 sblock10499 ACATTCGCGGTGCACTTC #rat_gr85389_libT1S1 18 1 sblock10499 ACATTCGCGGTGCACTTCT #rat_gr85390_libT1S1 19 1 sblock10499 ACATTCGCGGTGCACTTCTT #rat_gr85391_libT1S2 20 1 sblock10499 ACATTCGCGGTGCACTTCTTT #rat_gr85392_libT1S2 21 1 sblock10499 -------------------GGTGCTTAATGAGAAGTTGCCCGCGTGTTTTTCGCTTTATATGTGACGAAACATTCGCGGTGCACTTCTTTTTCAGCATC------------------ humanZ2p83 GTCAACGGTGCTGACGTGCGGTACTTAATGAGAAGTTGCCCGTGTTTTTTTCGCTTTATTTGTGACGAAACATTCGCGGTGCACTTCTTTTTCAGTATCCTATTCTGCCTTGAAGAC mouseZ3p83 -------CTGCTGACGTACGGTGCTTAATGAGAAGTTGCCCGCGTGTTTTTCGCTTTATATGTGACGAAACATTCGCGGTGCACTTCTTTTTCAGCATCCTATTCTACGTTGAAG-- *** ******************* ** ************* *********************************** *** sblock10499 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000054599 ENSRNOG00000036491 rno-mir-543 sblock10499 ((((((.((.(((((((.(((((((((((((((((.......)))).))))))..))))).))))))))).)).)))))) 1.000 -35.00 # humanZ2p83 (((..(((.((.((.(((.((((((.((.((((((.((((((((.((((.((((.......)))).))))....))))).))))))))).)).)))))).))))).)).)))..))) 0.980 -36.70 # mouseZ3p83 .....((((((.((((((.((.((((((.((((((((((((((((((.......)))).))))))..))))).))))))))).)).))))))......)))))).... 0.992 -39.40 # #sblock10499 chromosome:6:134397158:134397237:1 Same_strand|Boundary_non-coding|ENSRNOT00000054599|ENSRNOG00000036491 ## Same_strand|Exonic_non-coding|ENSRNOT00000054599|ENSRNOG00000036491 ## ENSRNOG00000036491|miRNA|rno-mir-543|rno-mir-543 [Source:miRBase;Acc:MI0003525] ## {MIR: rno-mir-543} #humanZ2p83 chromosome:14:100568056:100568172:1 Same_strand|Boundary_non-coding|ENST00000390751|ENSG00000212040|miRNA|hsa-mir-543 [Source:miRBase;Acc:MI0005565] ## {MIR: hsa-mir-543} #mouseZ3p83 chromosome:12:110955454:110955561:1 Same_strand|Boundary_non-coding|ENSMUST00000102286|ENSMUSG00000076241|miRNA|mmu-mir-543 [Source:miRBase;Acc:MI0003519] ## {MIR: mmu-mir-543} ========== sblock10500 (miRBase rno-mir-495) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10500: 0.001 randfold humanZ3p83_sblock10500: 0.001 randfold mouseZ4p83_sblock10500: 0.001 #forester humanZ3p83_sblock10500: 0.754876 forester mouseZ4p83_sblock10500: 1 #identity: 98.50 sblock10500 GAAGTTGCCCATGTTATT #rat_gr488605_libT1S1 18 2 sblock10500 GAAGTTGCCCATGTTATTT #rat_gr488606_libT1S2 19 2 sblock10500 GAAGTTGCCCATGTTATTT #rat_gr488606_libT1S1 19 1 sblock10500 GAAGTTGCCCATGTTATTTTTC #rat_gr488607_libT1S1 22 1 sblock10500 GAAGTTGCCCATGTTATTTTTC #rat_gr488607_libT1S2 22 1 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT1S1 22 3020 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT1S2 22 1578 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT1S1 21 1423 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT1S1 18 1196 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT1S1 20 1151 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT1S2 21 1079 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT1S2 18 791 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT1S2 20 774 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT1S1 21 294 sblock10500 AAACAAACATGGTGCACTTCTTT #rat_gr10937_libT1S1 23 212 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT1S2 21 201 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT1S1 19 144 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT1S1 20 140 sblock10500 AAACAAACATGGTGCACTT #rat_gr10933_libT1S1 19 138 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT1S1 22 136 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT1S2 19 128 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT1S2 20 105 sblock10500 AAACAAACATGGTGCACTTCTTT #rat_gr10937_libT1S2 23 101 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT1S2 22 98 sblock10500 AAACAAACATGGTGCACTT #rat_gr10933_libT1S2 19 86 sblock10500 AACAAACATGGTGCACTT #rat_gr23919_libT1S1 18 29 sblock10500 AACAAACATGGTGCACTT #rat_gr23919_libT1S2 18 25 sblock10500 ACAAACATGGTGCACTTCTT #rat_gr67436_libT1S1 20 20 sblock10500 ACAAACATGGTGCACTTCTT #rat_gr67436_libT1S2 20 19 sblock10500 ACAAACATGGTGCACTTC #rat_gr67434_libT1S1 18 16 sblock10500 ACAAACATGGTGCACTTCT #rat_gr67435_libT1S1 19 15 sblock10500 ACAAACATGGTGCACTTCT #rat_gr67435_libT1S2 19 12 sblock10500 ACAAACATGGTGCACTTCTTT #rat_gr67437_libT1S1 21 12 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT5S2 22 10 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT3S2 22 9 sblock10500 AAACAAACATGGTGCACTTCTTTT #rat_gr10938_libT1S1 24 9 sblock10500 ACAAACATGGTGCACTTCTTT #rat_gr67437_libT1S2 21 9 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT4S1 22 8 sblock10500 AACAAACATGGTGCACTTCTTTT #rat_gr23924_libT1S1 23 7 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT5S1 22 6 sblock10500 AAACAAACATGGTGCACTTCTTTT #rat_gr10938_libT1S2 24 6 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT3S2 20 5 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT5S1 20 5 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT5S1 21 5 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT5S2 19 5 sblock10500 AACAAACATGGTGCACTTCTTTT #rat_gr23924_libT1S2 23 5 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT3S1 18 4 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT3S2 18 4 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT5S2 18 4 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT2S2 21 4 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT3S2 21 4 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT3S1 22 4 sblock10500 ACAAACATGGTGCACTTC #rat_gr67434_libT1S2 18 4 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT4S2 18 3 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT5S2 20 3 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT2S2 20 3 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT5S2 21 3 sblock10500 ACAAACATGGTGCACTTCTT #rat_gr67436_libT5S2 20 3 sblock10500 ACAAACATGGTGCACTTCTTTT #rat_gr67438_libT1S2 22 3 sblock10500 CGAAACAAACATGGTGCA #rat_gr387591_libT1S2 18 2 sblock10500 CGAAACAAACATGGTGCACTTCT #rat_gr387593_libT1S2 23 2 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT2S1 21 2 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT4S2 21 2 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT5S2 21 2 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT3S1 22 2 sblock10500 AAACAAACATGGTGCACTTCTTTTT #rat_gr10939_libT1S2 25 2 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT3S1 19 2 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT5S1 20 2 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT2S1 21 2 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT5S1 22 2 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT5S2 22 2 sblock10500 AACAAACATGGTGCACTTCTTTTT #rat_gr23925_libT1S2 24 2 sblock10500 ACAAACATGGTGCACTTCTTTT #rat_gr67438_libT1S1 22 2 sblock10500 CAAACATGGTGCACTTCTT #rat_gr255320_libT1S1 19 2 sblock10500 CGAAACAAACATGGTGCAC #rat_gr387592_libT1S1 19 1 sblock10500 GAAACAAACATGGTGCAC #rat_gr478246_libT1S1 18 1 sblock10500 GAAACAAACATGGTGCACTTCTT #rat_gr478247_libT1S1 23 1 sblock10500 AAACAAACATGGTGCACT #rat_gr10932_libT2S2 18 1 sblock10500 AAACAAACATGGTGCACTT #rat_gr10933_libT5S1 19 1 sblock10500 AAACAAACATGGTGCACTT #rat_gr10933_libT5S2 19 1 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT3S1 20 1 sblock10500 AAACAAACATGGTGCACTTC #rat_gr10934_libT4S1 20 1 sblock10500 AAACAAACATGGTGCACTTCT #rat_gr10935_libT3S1 21 1 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libMirbase_rno-miR-495 22 1 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT2S1 22 1 sblock10500 AAACAAACATGGTGCACTTCTT #rat_gr10936_libT4S2 22 1 sblock10500 AAACAAACATGGTGCACTTCTTT #rat_gr10937_libT3S2 23 1 sblock10500 AAACAAACATGGTGCACTTCTTTT #rat_gr10938_libT3S1 24 1 sblock10500 AAACAAACATGGTGCACTTCTTTTT #rat_gr10939_libT1S1 25 1 sblock10500 AAACAAACATGGTGCACTTCTTTTTC #rat_gr10940_libT1S2 26 1 sblock10500 AACAAACATGGTGCACTT #rat_gr23919_libT5S2 18 1 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT2S2 19 1 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT3S2 19 1 sblock10500 AACAAACATGGTGCACTTC #rat_gr23920_libT5S1 19 1 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT2S1 20 1 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT3S2 20 1 sblock10500 AACAAACATGGTGCACTTCT #rat_gr23921_libT5S2 20 1 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT3S1 21 1 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT3S2 21 1 sblock10500 AACAAACATGGTGCACTTCTT #rat_gr23922_libT5S1 21 1 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT3S2 22 1 sblock10500 AACAAACATGGTGCACTTCTTT #rat_gr23923_libT4S2 22 1 sblock10500 AACAAACATGGTGCACTTCTTTT #rat_gr23924_libT5S2 23 1 sblock10500 ACAAACATGGTGCACTTCT #rat_gr67435_libT3S1 19 1 sblock10500 ACAAACATGGTGCACTTCTT #rat_gr67436_libT3S1 20 1 sblock10500 ACAAACATGGTGCACTTCTT #rat_gr67436_libT3S2 20 1 sblock10500 ACAAACATGGTGCACTTCTTT #rat_gr67437_libT5S2 21 1 sblock10500 ACAAACATGGTGCACTTCTTTT #rat_gr67438_libT5S1 22 1 sblock10500 CAAACATGGTGCACTTCTT #rat_gr255320_libT1S2 19 1 sblock10500 CAAACATGGTGCACTTCTTT #rat_gr255321_libT1S2 20 1 sblock10500 AACATGGTGCACTTCTTT #rat_gr28707_libT1S1 18 1 sblock10500 ---TACCTGAAAAGAAGTTGCCCATGTTATTTTTCGCTTTTATTTGTGACGAAACAAACATGGTGCACTTCTTTTTCGATATC----------- humanZ3p83 TGGTACCTGAAAAGAAGTTGCCCATGTTA-TTTTCGC-TTTATATGTGACGAAACAAACATGGTGCACTTCTTTTTCGGTATCAAATATCTCCT mouseZ4p83 -----------AAGAAGTTGCCCATGTTATTTTTCGCTTTTATTTGTGACGAAACAAACATGGTGCACTTCTT--------------------- ****************** ******* ***** ***************************** sblock10500 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000054386 ENSRNOG00000036263 rno-mir-495 sblock10500 ...(.((((((((((.(((((((((.(((.((((........)))).)))...))))))).)))))))))))).)..... 1.000 -26.00 # humanZ3p83 (((((((.(((((((((.((((((((((. .(((((. ((.......)))))))..))))))).)))))))))))).))))))).......... 1.000 -35.70 # mouseZ4p83 ((((((.((((((((((.(((.((((........)))).)))...))))))).))))))))) 1.000 -22.10 # #sblock10500 chromosome:6:134399218:134399297:1 Same_strand|Boundary_non-coding|ENSRNOT00000054386|ENSRNOG00000036263 ## Same_strand|Exonic_non-coding|ENSRNOT00000054386|ENSRNOG00000036263 ## ENSRNOG00000036263|miRNA|rno-mir-495|rno-mir-495 [Source:miRBase;Acc:MI0006152] ## {MIR: rno-mir-495} #humanZ3p83 chromosome:14:100569845:100569936:1 Same_strand|Boundary_non-coding|ENST00000385010|ENSG00000207743|miRNA|hsa-mir-495 [Source:miRBase;Acc:MI0003135] ## {MIR: hsa-mir-495} #mouseZ4p83 chromosome:12:110956937:110957056:1 Same_strand|Boundary_non-coding|ENSMUST00000093597|ENSMUSG00000070105|miRNA|mmu-mir-495 [Source:miRBase;Acc:MI0004639] ## {MIR: mmu-mir-495} ========== sblock1051 (miRBase rno-mir-107) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock1051: 0.001 randfold humanZ20p83_sblock1051: 0.001 randfold mouseZ23p83_sblock1051: 0.001 #forester humanZ20p83_sblock1051: 0.972487 forester mouseZ23p83_sblock1051: 0.972487 #identity: 98.43 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT1S1 18 35841 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT1S1 19 31371 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT1S2 19 26773 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT1S2 18 25971 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT1S1 20 19397 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT5S1 19 17137 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT5S2 18 16355 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT1S2 20 15036 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT5S2 19 15017 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT5S1 18 14561 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT5S1 20 11717 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT3S1 19 11036 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT3S1 18 9819 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT5S2 20 9574 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT4S2 18 8900 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT3S2 19 8166 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT4S2 19 8117 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT5S1 23 7633 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT2S1 19 7626 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT4S1 19 7387 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT3S2 18 7152 sblock1051 AGCAGCATTGTACAGGGCT #rat_gr153828_libT2S2 19 6706 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT2S2 18 6667 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT5S2 23 6570 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT3S1 20 6234 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT1S1 22 6227 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT1S1 23 6113 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT2S1 18 6106 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT5S1 22 6077 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT5S2 22 5945 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT4S2 20 5870 sblock1051 AGCAGCATTGTACAGGGC #rat_gr153827_libT4S1 18 5564 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT1S2 22 4864 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT3S2 20 4459 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT2S1 20 4396 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT1S2 23 4217 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT2S2 20 4141 sblock1051 AGCAGCATTGTACAGGGCTA #rat_gr153829_libT4S1 20 3960 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT1S1 21 3469 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT4S2 22 3340 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT4S2 23 3177 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT1S2 21 2977 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT2S1 22 2259 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT2S2 22 2231 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT5S1 21 2125 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT5S2 21 1927 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT4S1 22 1870 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT4S1 23 1795 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT2S2 23 1717 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT4S2 21 1669 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT2S2 21 1664 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT3S1 21 1535 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT3S1 22 1491 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT3S2 21 1372 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT2S1 21 1313 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT3S1 23 1262 sblock1051 AGCAGCATTGTACAGGGCTATC #rat_gr153831_libT3S2 22 1245 sblock1051 AGCAGCATTGTACAGGGCTAT #rat_gr153830_libT4S1 21 1148 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT3S2 23 985 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libT2S1 23 690 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT1S1 18 117 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT1S2 18 116 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT5S2 18 72 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT5S1 18 63 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT3S1 18 48 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT1S1 19 46 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT5S1 19 37 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT5S2 19 34 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT3S2 18 31 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT1S2 19 31 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT4S2 18 28 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT3S1 19 27 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT1S1 20 27 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT1S2 19 17 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT4S1 18 17 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT2S2 19 15 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT1S2 20 15 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT5S1 20 15 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT2S1 18 13 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT4S2 19 13 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT3S1 20 13 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT5S2 20 13 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT1S1 19 12 sblock1051 CAGCATTGTACAGGGCTA #rat_gr293185_libT2S2 18 12 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT2S1 19 12 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT1S1 18 11 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT3S2 20 11 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT1S1 21 10 sblock1051 CAGCATTGTACAGGGCTATCA #rat_gr293188_libT5S2 21 9 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT5S2 19 9 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT3S1 18 9 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT5S1 22 8 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT5S1 19 8 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT3S2 19 8 sblock1051 GCAGCATTGTACAGGGCTA #rat_gr533748_libT4S1 19 8 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT1S1 18 8 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT4S1 19 7 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT5S1 21 7 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT5S2 19 7 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT4S2 22 6 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT5S2 22 6 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT1S2 21 6 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT4S2 20 6 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT1S1 19 6 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT1S1 22 5 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT1S2 22 5 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT5S1 21 5 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT3S2 19 5 sblock1051 GCAGCATTGTACAGGGCTAT #rat_gr533749_libT5S1 20 5 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT1S2 18 5 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT1S2 19 5 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT3S1 19 5 sblock1051 AGCAGCATTGTACAGGGCTATCAA #rat_gr153833_libT5S2 24 4 sblock1051 CAGCATTGTACAGGGCTATCA #rat_gr293188_libT1S2 21 4 sblock1051 CAGCATTGTACAGGGCTATCA #rat_gr293188_libT5S1 21 4 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT3S2 22 4 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT5S2 21 4 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT4S2 19 4 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT2S2 18 4 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT5S1 18 4 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT2S1 20 4 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT2S2 19 4 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT4S1 22 3 sblock1051 GCATTGTACAGGGCTATC #rat_gr538994_libT1S1 18 3 sblock1051 GCATTGTACAGGGCTATC #rat_gr538994_libT2S2 18 3 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT1S1 20 3 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT1S2 20 3 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT2S1 20 3 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT3S2 20 3 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT5S1 20 3 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT2S2 21 3 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT4S2 21 3 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT2S1 19 3 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT2S2 19 3 sblock1051 CAGCATTGTACAGGGCTAT #rat_gr293186_libT3S1 19 3 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT1S1 21 3 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT1S2 21 3 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT5S2 21 3 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT2S2 18 3 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT5S1 18 3 sblock1051 AGCAGCATTGTACAGGGCTATCAA #rat_gr153833_libT1S2 24 2 sblock1051 AGCAGCATTGTACAGGGCTATCAA #rat_gr153833_libT2S2 24 2 sblock1051 GCATTGTACAGGGCTATCA #rat_gr538995_libT1S2 19 2 sblock1051 CAGCATTGTACAGGGCTATCA #rat_gr293188_libT2S2 21 2 sblock1051 CAGCATTGTACAGGGCTATCA #rat_gr293188_libT3S1 21 2 sblock1051 GCAGCATTGTACAGGGCTATCA #rat_gr533751_libT2S2 22 2 sblock1051 GCATTGTACAGGGCTATC #rat_gr538994_libT5S2 18 2 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT3S1 20 2 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT5S2 20 2 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT2S1 21 2 sblock1051 AAGCAGCATTGTACAGGGCTATC #rat_gr45162_libT1S2 23 2 sblock1051 GCAGCATTGTACAGGGCTAT #rat_gr533749_libT1S1 20 2 sblock1051 GCAGCATTGTACAGGGCTAT #rat_gr533749_libT2S1 20 2 sblock1051 GCAGCATTGTACAGGGCTAT #rat_gr533749_libT5S2 20 2 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT2S2 21 2 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT3S2 21 2 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT4S2 21 2 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT2S1 18 2 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT2S1 19 2 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT3S2 19 2 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT5S1 19 2 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT4S1 18 2 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT5S2 18 2 sblock1051 AGCAGCATTGTACAGGGCTATCAA #rat_gr153833_libT1S1 24 1 sblock1051 AGCAGCATTGTACAGGGCTATCAA #rat_gr153833_libT3S1 24 1 sblock1051 AGCAGCATTGTACAGGGCTATCAA #rat_gr153833_libT5S1 24 1 sblock1051 GCATTGTACAGGGCTATCA #rat_gr538995_libT5S1 19 1 sblock1051 GCATTGTACAGGGCTATCA #rat_gr538995_libT5S2 19 1 sblock1051 CAGCATTGTACAGGGCTATCA #rat_gr293188_libT1S1 21 1 sblock1051 AGCAGCATTGTACAGGGCTATCA #rat_gr153832_libMirbase_rno-miR-107 23 1 sblock1051 GCATTGTACAGGGCTATC #rat_gr538994_libT3S2 18 1 sblock1051 CAGCATTGTACAGGGCTATC #rat_gr293187_libT4S1 20 1 sblock1051 GCAGCATTGTACAGGGCTATC #rat_gr533750_libT3S1 21 1 sblock1051 AAGCAGCATTGTACAGGGCTATC #rat_gr45162_libT1S1 23 1 sblock1051 AAGCAGCATTGTACAGGGCTATC #rat_gr45162_libT4S1 23 1 sblock1051 AAGCAGCATTGTACAGGGCTATC #rat_gr45162_libT4S2 23 1 sblock1051 AAGCAGCATTGTACAGGGCTATC #rat_gr45162_libT5S1 23 1 sblock1051 AAGCAGCATTGTACAGGGCTATC #rat_gr45162_libT5S2 23 1 sblock1051 GCAGCATTGTACAGGGCTAT #rat_gr533749_libT3S2 20 1 sblock1051 GCAGCATTGTACAGGGCTAT #rat_gr533749_libT4S2 20 1 sblock1051 AAGCAGCATTGTACAGGGCTAT #rat_gr45161_libT1S1 22 1 sblock1051 AAGCAGCATTGTACAGGGCTAT #rat_gr45161_libT1S2 22 1 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT3S1 21 1 sblock1051 AAGCAGCATTGTACAGGGCTA #rat_gr45160_libT4S1 21 1 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT3S2 18 1 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT4S1 18 1 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT4S2 18 1 sblock1051 GCAGCATTGTACAGGGCT #rat_gr533747_libT5S2 18 1 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT2S2 20 1 sblock1051 AAGCAGCATTGTACAGGGCT #rat_gr45159_libT4S1 20 1 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT4S1 19 1 sblock1051 AAGCAGCATTGTACAGGGC #rat_gr45158_libT4S2 19 1 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT1S2 18 1 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT2S1 18 1 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT3S2 18 1 sblock1051 AAGCAGCATTGTACAGGG #rat_gr45157_libT4S2 18 1 sblock1051 CAAGCAGCATTGTACAGGG #rat_gr269156_libT2S2 19 1 sblock1051 TGGCATGGAGTTCAAGCAGC #rat_gr1009472_libT1S1 20 2 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT1S1 19 73 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT5S1 19 58 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT1S2 19 54 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT5S2 19 43 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT2S2 19 39 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT4S2 19 37 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT3S1 19 33 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT1S1 22 23 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT1S2 21 23 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT4S1 19 22 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT5S2 21 21 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT1S1 23 19 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT5S1 21 19 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT1S1 21 18 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT1S1 20 18 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT5S2 20 16 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT2S1 19 16 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT5S1 18 13 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT5S2 23 12 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT5S2 22 11 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT1S2 20 11 sblock1051 AGCTTCTTTACAGTGTTGC #rat_gr167976_libT3S2 19 11 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT1S1 18 10 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT1S2 18 9 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT5S1 22 8 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT5S1 23 7 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT4S2 22 7 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT3S2 21 7 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT4S2 21 7 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT3S1 23 6 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT1S2 22 6 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT5S2 18 6 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT4S2 23 5 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT3S2 22 5 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT3S1 20 5 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT4S2 18 5 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT1S2 23 4 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT2S1 21 4 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT2S2 20 4 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT5S1 19 4 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT5S2 19 4 sblock1051 AAGCTTCTTTACAGTGTT #rat_gr48914_libT5S2 18 4 sblock1051 AAGCTTCTTTACAGTGTTGCCTT #rat_gr48919_libT5S2 23 3 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT3S1 21 3 sblock1051 AAGCTTCTTTACAGTGTTGCCT #rat_gr48918_libT2S2 22 3 sblock1051 AAGCTTCTTTACAGTGTTGCCT #rat_gr48918_libT5S1 22 3 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT2S1 20 3 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT3S2 20 3 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT4S2 20 3 sblock1051 AGCTTCTTTACAGTGTTGCC #rat_gr167977_libT5S1 20 3 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT2S2 18 3 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT2S2 19 3 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT4S1 19 3 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT2S2 23 2 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT3S1 22 2 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT4S1 22 2 sblock1051 AGCTTCTTTACAGTGTTGCCT #rat_gr167978_libT2S2 21 2 sblock1051 AAGCTTCTTTACAGTGTTGCCT #rat_gr48918_libT1S1 22 2 sblock1051 AAGCTTCTTTACAGTGTTGCC #rat_gr48917_libT3S1 21 2 sblock1051 AAGCTTCTTTACAGTGTTGCC #rat_gr48917_libT5S2 21 2 sblock1051 AAGCTTCTTTACAGTGTTGC #rat_gr48916_libT5S2 20 2 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT1S2 19 2 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT2S1 19 2 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT3S2 19 2 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT4S2 19 2 sblock1051 AAGCTTCTTTACAGTGTT #rat_gr48914_libT1S2 18 2 sblock1051 AAGCTTCTTTACAGTGTT #rat_gr48914_libT5S1 18 2 sblock1051 AGCTTCTTTACAGTGTTGCCTTG #rat_gr167980_libT2S1 23 1 sblock1051 AGCTTCTTTACAGTGTTGCCTT #rat_gr167979_libT2S2 22 1 sblock1051 AAGCTTCTTTACAGTGTTGCCTT #rat_gr48919_libT1S1 23 1 sblock1051 AAGCTTCTTTACAGTGTTGCCTT #rat_gr48919_libT3S2 23 1 sblock1051 AAGCTTCTTTACAGTGTTGCCTT #rat_gr48919_libT5S1 23 1 sblock1051 AAGCTTCTTTACAGTGTTGCCT #rat_gr48918_libT2S1 22 1 sblock1051 AAGCTTCTTTACAGTGTTGCCT #rat_gr48918_libT3S1 22 1 sblock1051 AAGCTTCTTTACAGTGTTGCCT #rat_gr48918_libT4S1 22 1 sblock1051 AAGCTTCTTTACAGTGTTGCC #rat_gr48917_libT1S2 21 1 sblock1051 AAGCTTCTTTACAGTGTTGCC #rat_gr48917_libT2S1 21 1 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT2S1 18 1 sblock1051 AGCTTCTTTACAGTGTTG #rat_gr167975_libT3S1 18 1 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT1S1 19 1 sblock1051 AAGCTTCTTTACAGTGTTG #rat_gr48915_libT3S1 19 1 sblock1051 AAGCTTCTTTACAGTGTT #rat_gr48914_libT2S2 18 1 sblock1051 ----------------TTCTCTCTGCTTTAAGCTTCTTTACAGTGTTGCCTTGTGGCATGGAGTTCAAGCAGCATTGTACAGGGCTATCAAAGCACAGAGAGC------ humanZ20p83 -----------------TCTCTCTGCTTTCAGCTTCTTTACAGTGTTGCCTTGTGGCATGGAGTTCAAGCAGCATTGTACAGGGCTATCAAAGCACAGAGA-------- mouseZ23p83 GCAATACTCGATATTTTTCTCTGTGCTTTCAGCTTCTTTACAGTGTTGCCTTGTGGCATGGAGTTCAAGCAGCATTGTACAGGGCTATCAAAGCACAGAGAGCTCGCGA ***** ****** *********************************************************************** sblock1051 +++++ +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +++++ #ENSRNOT00000025736 ENSRNOG00000018944 NP_001099843.1 sblock1051 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053762 ENSRNOG00000035639 rno-mir-107 sblock1051 ((((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))))). 1.000 -35.10 # humanZ20p83 (((((.((((((.(((.(((.((((((((((.((((.(((.....))))))))))))))))).))))))...)))))).))))) 0.999 -34.00 # mouseZ23p83 .......(((......(((((((((((((.(((.(((.((((((((((.((((.(((.....))))))))))))))))).))))))...)))))))))))))....))) 0.931 -42.40 # #sblock1051 chromosome:1:238806835:238806921:-1 Same_strand|Exonic_non-coding|ENSRNOT00000053762|ENSRNOG00000035639 ## Same_strand|Intronic_coding|ENSRNOT00000025736|ENSRNOG00000018944 ## Same_strand|Boundary_non-coding|ENSRNOT00000053762|ENSRNOG00000035639 ## ENSRNOG00000035639|miRNA|rno-mir-107|rno-mir-107 [Source:miRBase;Acc:MI0000890] ## ENSRNOG00000018944|protein_coding|NP_001099843.1|pantothenate kinase 1 [Source:RefSeq_peptide;Acc:NP_001099843] ## {MIR: rno-mir-107} #humanZ20p83 chromosome:10:91342482:91342565:-1 Same_strand|Intronic_coding|ENST00000371774|ENSG00000152782|protein_coding|Pantothenate kinase 1 (EC 2.7.1.33)(Pantothenic acid kinase 1)(hPanK1)(hPanK) [Source:UniProtKB/Swiss-Prot;Acc:Q8TE04] ## Same_strand|Exonic_non-coding|ENST00000362127|ENSG00000198997|miRNA|hsa-mir-107 [Source:miRBase;Acc:MI0000114] ## {MIR: hsa-mir-107} #mouseZ23p83 chromosome:19:34895171:34895279:-1 Same_strand|Intronic_coding|ENSMUST00000112460|ENSMUSG00000033610|protein_coding|pantothenate kinase 1 Gene [Source:MGI Symbol;Acc:MGI:1922985] ## Same_strand|Boundary_non-coding|ENSMUST00000083660|ENSMUSG00000065594|miRNA|mmu-mir-107 [Source:miRBase;Acc:MI0000684] ## {MIR: mmu-mir-107} ========== sblock10512 (miRBase rno-mir-382) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10512: 0.001 randfold humanZ24p83_sblock10512: 0.001 randfold mouseZ26p83_sblock10512: 0.002 #forester humanZ24p83_sblock10512: 0.920078 forester mouseZ26p83_sblock10512: 1 #identity: 98.97 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT1S1 19 1902 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT1S2 19 1354 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT1S1 18 1326 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT1S2 18 1132 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT1S2 23 943 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT1S1 23 890 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT1S1 21 810 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT1S2 21 608 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT1S1 22 205 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT1S2 20 190 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT1S1 20 187 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT1S2 22 176 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT1S1 19 53 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT1S2 19 48 sblock10512 AAGTTGTTCGTGGTGGATTCGC #rat_gr57524_libT1S2 22 41 sblock10512 AAGTTGTTCGTGGTGGATTCGC #rat_gr57524_libT1S1 22 32 sblock10512 AAGTTGTTCGTGGTGGAT #rat_gr57520_libT1S1 18 31 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT5S2 18 30 sblock10512 AAGTTGTTCGTGGTGGAT #rat_gr57520_libT1S2 18 27 sblock10512 AAGTTGTTCGTGGTGGATTC #rat_gr57522_libT1S1 20 26 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT5S2 19 23 sblock10512 AAGTTGTTCGTGGTGGATTC #rat_gr57522_libT1S2 20 21 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT3S1 19 20 sblock10512 AGTTGTTCGTGGTGGATTCGC #rat_gr203970_libT1S1 21 20 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT5S2 23 19 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT3S2 23 15 sblock10512 AGTTGTTCGTGGTGGATTCGC #rat_gr203970_libT1S2 21 15 sblock10512 AGTTGTTCGTGGTGGATTCGCT #rat_gr203971_libT1S1 22 14 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT3S2 19 13 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT5S1 19 13 sblock10512 AAGTTGTTCGTGGTGGATTCG #rat_gr57523_libT1S1 21 13 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT3S2 18 12 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT5S2 21 12 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT4S2 19 11 sblock10512 AAGTTGTTCGTGGTGGATTCG #rat_gr57523_libT1S2 21 11 sblock10512 AGTTGTTCGTGGTGGATTCGCT #rat_gr203971_libT1S2 22 11 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT3S1 18 10 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT3S2 21 9 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT5S1 21 9 sblock10512 AGTTGTTCGTGGTGGATT #rat_gr203967_libT1S1 18 9 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT5S1 18 8 sblock10512 AAGTTGTTCGTGGTGGATT #rat_gr57521_libT1S1 19 8 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT2S1 18 7 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT3S1 23 7 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT4S1 18 5 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT4S2 18 5 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT3S1 21 5 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT4S1 21 5 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT2S1 19 4 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT3S2 20 4 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT5S2 22 4 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT5S1 23 4 sblock10512 AAGTTGTTCGTGGTGGATT #rat_gr57521_libT1S2 19 4 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT3S1 22 3 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT3S2 22 3 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT4S1 23 3 sblock10512 AGTTGTTCGTGGTGGATTCG #rat_gr203969_libT1S2 20 3 sblock10512 GAAGTTGTTCGTGGTGGA #rat_gr488679_libT2S2 18 2 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT2S2 19 2 sblock10512 GAAGTTGTTCGTGGTGGAT #rat_gr488680_libT4S1 19 2 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT2S2 20 2 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT4S2 20 2 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT2S2 22 2 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT2S1 23 2 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT4S2 23 2 sblock10512 AGTTGTTCGTGGTGGATT #rat_gr203967_libT1S2 18 2 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT3S1 19 2 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT5S2 19 2 sblock10512 AGTTGTTCGTGGTGGATTCG #rat_gr203969_libT1S1 20 2 sblock10512 AGTTGTTCGTGGTGGATTCGCT #rat_gr203971_libT5S1 22 2 sblock10512 AGAAGTTGTTCGTGGTGGA #rat_gr135025_libT1S2 19 1 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT3S1 20 1 sblock10512 GAAGTTGTTCGTGGTGGATT #rat_gr488681_libT5S2 20 1 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT2S2 21 1 sblock10512 GAAGTTGTTCGTGGTGGATTC #rat_gr488682_libT4S2 21 1 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libMirbase_rno-miR-382 22 1 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT2S1 22 1 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT4S1 22 1 sblock10512 GAAGTTGTTCGTGGTGGATTCG #rat_gr488683_libT5S1 22 1 sblock10512 GAAGTTGTTCGTGGTGGATTCGC #rat_gr488684_libT2S2 23 1 sblock10512 GAAGTTGTTCGTGGTGGATTCGCT #rat_gr488685_libT1S2 24 1 sblock10512 AAGTTGTTCGTGGTGGAT #rat_gr57520_libT2S2 18 1 sblock10512 AAGTTGTTCGTGGTGGAT #rat_gr57520_libT3S2 18 1 sblock10512 AAGTTGTTCGTGGTGGAT #rat_gr57520_libT5S1 18 1 sblock10512 AAGTTGTTCGTGGTGGATT #rat_gr57521_libT3S1 19 1 sblock10512 AAGTTGTTCGTGGTGGATT #rat_gr57521_libT5S2 19 1 sblock10512 AAGTTGTTCGTGGTGGATTCG #rat_gr57523_libT5S1 21 1 sblock10512 AAGTTGTTCGTGGTGGATTCG #rat_gr57523_libT5S2 21 1 sblock10512 AGTTGTTCGTGGTGGATT #rat_gr203967_libT4S1 18 1 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT2S1 19 1 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT2S2 19 1 sblock10512 AGTTGTTCGTGGTGGATTC #rat_gr203968_libT4S2 19 1 sblock10512 AGTTGTTCGTGGTGGATTCG #rat_gr203969_libT5S2 20 1 sblock10512 AGTTGTTCGTGGTGGATTCGCTT #rat_gr203972_libT1S2 23 1 sblock10512 TCGTGGTGGATTCGCTTTAC #rat_gr891598_libT1S1 20 1 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT1S1 22 474 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT1S2 22 343 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT1S1 19 220 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT1S1 20 206 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libT1S1 21 180 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT1S2 20 130 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libT1S2 21 126 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT1S2 19 119 sblock10512 ATCATTCACGGACAACACTTT #rat_gr217677_libT1S1 21 24 sblock10512 AATCATTCACGGACAACA #rat_gr60420_libT1S1 18 22 sblock10512 ATCATTCACGGACAACACTTT #rat_gr217677_libT1S2 21 21 sblock10512 AATCATTCACGGACAACA #rat_gr60420_libT1S2 18 15 sblock10512 AATCATTCACGGACAACACTTTT #rat_gr60425_libT1S1 23 13 sblock10512 ATCATTCACGGACAACACT #rat_gr217675_libT1S1 19 11 sblock10512 ATCATTCACGGACAACAC #rat_gr217674_libT1S1 18 9 sblock10512 ATCATTCACGGACAACAC #rat_gr217674_libT1S2 18 6 sblock10512 ATCATTCACGGACAACACTT #rat_gr217676_libT1S1 20 6 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT5S1 20 5 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT4S1 22 5 sblock10512 AATCATTCACGGACAACACTTTT #rat_gr60425_libT1S2 23 5 sblock10512 ATCATTCACGGACAACACT #rat_gr217675_libT1S2 19 5 sblock10512 ATCATTCACGGACAACACTTTT #rat_gr217678_libT1S2 22 5 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT4S1 19 4 sblock10512 CGAATCATTCACGGACAACAC #rat_gr388483_libT1S2 21 3 sblock10512 CGAATCATTCACGGACAACACT #rat_gr388484_libT1S1 22 3 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT3S1 19 3 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT3S2 19 3 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT5S2 19 3 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT4S1 20 3 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT5S2 20 3 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libT4S2 21 3 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT3S2 22 3 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT5S2 22 3 sblock10512 ATCATTCACGGACAACACTTTT #rat_gr217678_libT1S1 22 3 sblock10512 CGAATCATTCACGGACAAC #rat_gr388482_libT1S2 19 2 sblock10512 CGAATCATTCACGGACAACACT #rat_gr388484_libT1S2 22 2 sblock10512 GAATCATTCACGGACAAC #rat_gr489397_libT1S1 18 2 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT4S2 20 2 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libT3S2 21 2 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libT4S1 21 2 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT4S2 22 2 sblock10512 ATCATTCACGGACAACACTT #rat_gr217676_libT1S2 20 2 sblock10512 CGAATCATTCACGGACAA #rat_gr388481_libT4S2 18 1 sblock10512 CGAATCATTCACGGACAACAC #rat_gr388483_libT1S1 21 1 sblock10512 CGAATCATTCACGGACAACACTT #rat_gr388485_libT1S1 23 1 sblock10512 CGAATCATTCACGGACAACACTT #rat_gr388485_libT1S2 23 1 sblock10512 AATCATTCACGGACAACA #rat_gr60420_libT3S2 18 1 sblock10512 AATCATTCACGGACAACAC #rat_gr60421_libT2S1 19 1 sblock10512 AATCATTCACGGACAACACT #rat_gr60422_libT2S2 20 1 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libMirbase_rno-miR-382* 21 1 sblock10512 AATCATTCACGGACAACACTT #rat_gr60423_libT5S1 21 1 sblock10512 AATCATTCACGGACAACACTTT #rat_gr60424_libT2S1 22 1 sblock10512 AATCATTCACGGACAACACTTTT #rat_gr60425_libT5S2 23 1 sblock10512 AATCATTCACGGACAACACTTTTT #rat_gr60426_libT1S1 24 1 sblock10512 ATCATTCACGGACAACACTTTT #rat_gr217678_libT4S1 22 1 sblock10512 TCATTCACGGACAACACTTT #rat_gr824824_libT1S2 20 1 sblock10512 CATTCACGGACAACACTTT #rat_gr315179_libT1S1 19 1 sblock10512 --------------------GGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACC----------------- humanZ24p83 --------------------------------GAAGTTGTTCGTGGTGGATTCGCTTTACTTATGACGAATCATTCACGGACAACACTT---------------------------- mouseZ26p83 TCTTGTCTCTGCTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTACCTCTAAGG ****************************** ************************** sblock10512 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053748 ENSRNOG00000035625 rno-mir-382 sblock10512 ((((((.(((((((.(((((((((((..(((((((.........).))))))..)))))))))))..))))))))))))) 1.000 -34.50 # humanZ24p83 ...(((((((((((..((((((.((.......))))))))..))))))))))).... 1.000 -22.30 # mouseZ26p83 .((((.....((.......((((((.((((((((.(((((((((((..((((((..(((....)))))))))..)))))))))))..))))))))))))))...))......)))). 0.855 -38.60 # #sblock10512 chromosome:6:134415263:134415342:1 Same_strand|Exonic_non-coding|ENSRNOT00000053748|ENSRNOG00000035625 ## ENSRNOG00000035625|miRNA|rno-mir-382|rno-mir-382 [Source:miRBase;Acc:MI0003548] ## {MIR: rno-mir-382} #humanZ24p83 chromosome:14:100590374:100590493:1 Same_strand|Boundary_non-coding|ENST00000385009|ENSG00000207742|miRNA|hsa-mir-382 [Source:miRBase;Acc:MI0000790] ## {MIR: hsa-mir-382} #mouseZ26p83 chromosome:12:110971959:110972075:1 Same_strand|Boundary_non-coding|ENSMUST00000083494|ENSMUSG00000065428|miRNA|mmu-mir-382 [Source:miRBase;Acc:MI0000799] ## {MIR: mmu-mir-382} ========== sblock10513 (miRBase rno-mir-134) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10513: 0.001 randfold humanZ26p83_sblock10513: 0.003 randfold mouseZ27p83_sblock10513: 0.003 #forester humanZ26p83_sblock10513: 0.791881 forester mouseZ27p83_sblock10513: 0.980543 #identity: 97.74 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT1S1 19 385 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT1S1 20 273 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT1S1 21 254 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT1S1 18 179 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT1S2 19 166 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT1S2 20 84 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT1S1 22 75 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT1S2 21 63 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT1S2 18 53 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT1S2 22 34 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT5S1 20 20 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT5S2 22 17 sblock10513 TGTGACTGGTTGACCAGAGGGGC #rat_gr1083601_libT1S1 23 17 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT5S2 21 16 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT3S1 19 15 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT4S1 20 15 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT5S1 19 14 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT3S2 20 14 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT5S2 20 12 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT5S1 21 12 sblock10513 GTGACTGGTTGACCAGAGG #rat_gr644415_libT1S1 19 11 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT3S1 20 10 sblock10513 GTGACTGGTTGACCAGAGGG #rat_gr644416_libT1S1 20 10 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT5S1 18 8 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT5S2 19 8 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT3S2 21 8 sblock10513 TGTGACTGGTTGACCAGAGGGGC #rat_gr1083601_libT1S2 23 8 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT3S2 18 7 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT4S1 19 7 sblock10513 GTGTGACTGGTTGACCAGAG #rat_gr654166_libT1S1 20 6 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT3S1 18 6 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT5S2 18 6 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT3S2 19 6 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT3S1 21 6 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT5S1 22 6 sblock10513 GTGACTGGTTGACCAGAG #rat_gr644414_libT1S1 18 6 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT2S1 19 5 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT4S2 19 5 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT4S2 20 5 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT4S1 21 5 sblock10513 GTGACTGGTTGACCAGAGGG #rat_gr644416_libT1S2 20 5 sblock10513 GTGACTGGTTGACCAGAG #rat_gr644414_libT1S2 18 4 sblock10513 GTGACTGGTTGACCAGAGG #rat_gr644415_libT1S2 19 4 sblock10513 GTGTGACTGGTTGACCAGA #rat_gr654165_libT1S2 19 3 sblock10513 GTGTGACTGGTTGACCAGAG #rat_gr654166_libT1S2 20 3 sblock10513 GTGTGACTGGTTGACCAGAGG #rat_gr654167_libT1S2 21 3 sblock10513 GTGTGACTGGTTGACCAGAGGG #rat_gr654168_libT1S2 22 3 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT3S1 22 3 sblock10513 GTGTGACTGGTTGACCAG #rat_gr654164_libT1S2 18 2 sblock10513 GTGTGACTGGTTGACCAGAGG #rat_gr654167_libT1S1 21 2 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT4S1 18 2 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT4S2 18 2 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT2S2 21 2 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT4S2 21 2 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT3S2 22 2 sblock10513 TGTGACTGGTTGACCAGAGGGGC #rat_gr1083601_libT5S2 23 2 sblock10513 GTGACTGGTTGACCAGAGG #rat_gr644415_libT4S1 19 2 sblock10513 GTGTGACTGGTTGACCAG #rat_gr654164_libT1S1 18 1 sblock10513 GTGTGACTGGTTGACCAGA #rat_gr654165_libT1S1 19 1 sblock10513 GTGTGACTGGTTGACCAGAGGG #rat_gr654168_libT5S2 22 1 sblock10513 GTGTGACTGGTTGACCAGAGGGG #rat_gr654169_libT1S2 23 1 sblock10513 TGTGACTGGTTGACCAGA #rat_gr1083596_libT2S1 18 1 sblock10513 TGTGACTGGTTGACCAGAG #rat_gr1083597_libT2S2 19 1 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT2S1 20 1 sblock10513 TGTGACTGGTTGACCAGAGG #rat_gr1083598_libT2S2 20 1 sblock10513 TGTGACTGGTTGACCAGAGGG #rat_gr1083599_libT2S1 21 1 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libMirbase_rno-miR-134 22 1 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT2S2 22 1 sblock10513 TGTGACTGGTTGACCAGAGGGG #rat_gr1083600_libT4S2 22 1 sblock10513 GTGACTGGTTGACCAGAGG #rat_gr644415_libT5S2 19 1 sblock10513 GTGACTGGTTGACCAGAGGGG #rat_gr644417_libT1S2 21 1 sblock10513 GTGACTGGTTGACCAGAGGGGC #rat_gr644418_libT1S2 22 1 sblock10513 CTGTGGGCCACCTAGTCACC #rat_gr456234_libT1S1 20 31 sblock10513 CTGTGGGCCACCTAGTCACCAAC #rat_gr456237_libT1S1 23 20 sblock10513 CTGTGGGCCACCTAGTCACCA #rat_gr456235_libT1S1 21 17 sblock10513 CTGTGGGCCACCTAGTCAC #rat_gr456233_libT1S1 19 12 sblock10513 CTGTGGGCCACCTAGTCACCA #rat_gr456235_libT1S2 21 11 sblock10513 CTGTGGGCCACCTAGTCA #rat_gr456232_libT1S1 18 10 sblock10513 CTGTGGGCCACCTAGTCACC #rat_gr456234_libT1S2 20 10 sblock10513 CTGTGGGCCACCTAGTCACCAAC #rat_gr456237_libT1S2 23 8 sblock10513 TGTGGGCCACCTAGTCACC #rat_gr1087056_libT1S1 19 7 sblock10513 CTGTGGGCCACCTAGTCAC #rat_gr456233_libT1S2 19 4 sblock10513 CCTGTGGGCCACCTAGTCACCAA #rat_gr381945_libT1S2 23 2 sblock10513 CCTGTGGGCCACCTAGTCACCAAC #rat_gr381946_libT1S1 24 2 sblock10513 CTGTGGGCCACCTAGTCA #rat_gr456232_libT1S2 18 2 sblock10513 CTGTGGGCCACCTAGTCACCAA #rat_gr456236_libT1S2 22 2 sblock10513 CTGTGGGCCACCTAGTCACCAACC #rat_gr456238_libT1S1 24 2 sblock10513 TGTGGGCCACCTAGTCACCA #rat_gr1087057_libT1S2 20 2 sblock10513 TGTGGGCCACCTAGTCACCAAC #rat_gr1087058_libT1S1 22 2 sblock10513 TGTGGGCCACCTAGTCACCAACC #rat_gr1087059_libT1S1 23 2 sblock10513 CCTGTGGGCCACCTAGTC #rat_gr381941_libT1S1 18 1 sblock10513 CCTGTGGGCCACCTAGTCAC #rat_gr381942_libT1S2 20 1 sblock10513 CCTGTGGGCCACCTAGTCACC #rat_gr381943_libT1S1 21 1 sblock10513 CCTGTGGGCCACCTAGTCACCA #rat_gr381944_libT1S1 22 1 sblock10513 CTGTGGGCCACCTAGTCA #rat_gr456232_libT4S1 18 1 sblock10513 CTGTGGGCCACCTAGTCACCA #rat_gr456235_libT3S1 21 1 sblock10513 CTGTGGGCCACCTAGTCACCA #rat_gr456235_libT4S1 21 1 sblock10513 TGTGGGCCACCTAGTCAC #rat_gr1087055_libT1S1 18 1 sblock10513 TGTGGGCCACCTAGTCACC #rat_gr1087056_libT1S2 19 1 sblock10513 TGTGGGCCACCTAGTCACCA #rat_gr1087057_libT1S1 20 1 sblock10513 TGTGGGCCACCTAGTCACCAAC #rat_gr1087058_libT1S2 22 1 sblock10513 TGTGGGCCACCTAGTCACCAACC #rat_gr1087059_libT1S2 23 1 sblock10513 GTGGGCCACCTAGTCACCA #rat_gr651361_libT1S2 19 1 sblock10513 GTGGGCCACCTAGTCACCAAC #rat_gr651362_libT1S1 21 1 sblock10513 GCCACCTAGTCACCAACC #rat_gr542299_libT1S1 18 1 sblock10513 CAGGGTGTGTGACTGGTTGACCAGAGGGGCGTGCACTTTGTTCACCCTGTGGGCCACCTAGTCACCAACCCTC----- humanZ26p83 -AGGGTGTGTGACTGGTTGACCAGAGGGGCATGCACTGTGTTCACCCTGTGGGCCACCTAGTCACCAACCCTCAGCAT mouseZ27p83 -AGGGTGTGTGACTGGTTGACCAGAGGGGCGTGCACTCTGTTCACCCTGTGGGCCACCTAGTCACCAACCCTCAGCAT ***************************** ****** *********************************** sblock10513 .....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053749 ENSRNOG00000035626 rno-mir-134 sblock10513 .(((((..((((((((.((.(((.((((....((.....))...)))).)))..)).))))))))..))))). 1.000 -34.90 # humanZ26p83 (((((..((((((((.((.(((.((((((((.....))))...)))).)))..)).))))))))..)))))...... 1.000 -34.90 # mouseZ27p83 (((((..((((((((.((.(((.((((....((.....))...)))).)))..)).))))))))..)))))...... 1.000 -34.60 # #sblock10513 chromosome:6:134415632:134415704:1 Same_strand|Exonic_non-coding|ENSRNOT00000053749|ENSRNOG00000035626 ## ENSRNOG00000035626|miRNA|rno-mir-134|rno-mir-134 [Source:miRBase;Acc:MI0000907] ## {MIR: rno-mir-134} #humanZ26p83 chromosome:14:100590778:100590854:1 Same_strand|Boundary_non-coding|ENST00000385258|ENSG00000207993|miRNA|hsa-mir-134 [Source:miRBase;Acc:MI0000474] ## {MIR: hsa-mir-134} #mouseZ27p83 chromosome:12:110972349:110972425:1 Same_strand|Boundary_non-coding|ENSMUST00000083492|ENSMUSG00000065426|miRNA|mmu-mir-134 [Source:miRBase;Acc:MI0000160] ## {MIR: mmu-mir-134} ========== sblock10520 (miRBase rno-mir-412) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10520: 0.009 randfold humanZ41p83_sblock10520: 0.025 randfold mouseZ48p83_sblock10520: 0.083 #forester humanZ41p83_sblock10520: 0.8371 forester mouseZ48p83_sblock10520: 1 #identity: 95.00 sblock10520 TGGTCGACCAGCTGGAAAGT #rat_gr1064435_libT1S1 20 52 sblock10520 TGGTCGACCAGCTGGAAAG #rat_gr1064434_libT1S1 19 42 sblock10520 TGGTCGACCAGCTGGAAAGT #rat_gr1064435_libT1S2 20 42 sblock10520 TGGTCGACCAGCTGGAAAGTAA #rat_gr1064437_libT1S2 22 29 sblock10520 TGGTCGACCAGCTGGAAAG #rat_gr1064434_libT1S2 19 24 sblock10520 TGGTCGACCAGCTGGAAA #rat_gr1064433_libT1S1 18 16 sblock10520 TGGTCGACCAGCTGGAAAGTAA #rat_gr1064437_libT1S1 22 16 sblock10520 TGGTCGACCAGCTGGAAA #rat_gr1064433_libT1S2 18 13 sblock10520 ATGGTCGACCAGCTGGAAAGT #rat_gr235276_libT1S1 21 11 sblock10520 TGGTCGACCAGCTGGAAAGTAAT #rat_gr1064438_libT1S2 23 9 sblock10520 TGGTCGACCAGCTGGAAAGTAAT #rat_gr1064438_libT1S1 23 8 sblock10520 ATGGTCGACCAGCTGGAAAG #rat_gr235275_libT1S1 20 4 sblock10520 ATGGTCGACCAGCTGGAAAGT #rat_gr235276_libT1S2 21 4 sblock10520 TGGTCGACCAGCTGGAAAGTA #rat_gr1064436_libT1S2 21 4 sblock10520 TGGTCGACCAGCTGGAAAGTA #rat_gr1064436_libT1S1 21 3 sblock10520 ATGGTCGACCAGCTGGAA #rat_gr235274_libT1S1 18 2 sblock10520 GATGGTCGACCAGCTGGAAAGT #rat_gr523016_libT1S1 22 1 sblock10520 ATGGTCGACCAGCTGGAAAGTAA #rat_gr235277_libT1S1 23 1 sblock10520 ATGGTCGACCAGCTGGAAAGTAAT #rat_gr235278_libT1S2 24 1 sblock10520 TGGTCGACCAGCTGGAAA #rat_gr1064433_libT3S2 18 1 sblock10520 TGGTCGACCAGCTGGAAA #rat_gr1064433_libT5S2 18 1 sblock10520 TGGTCGACCAGCTGGAAAG #rat_gr1064434_libT2S1 19 1 sblock10520 TGGTCGACCAGCTGGAAAGT #rat_gr1064435_libT2S1 20 1 sblock10520 TGGTCGACCAGCTGGAAAGT #rat_gr1064435_libT3S1 20 1 sblock10520 TGGTCGACCAGCTGGAAAGT #rat_gr1064435_libT5S2 20 1 sblock10520 TGGTCGACCAGCTGGAAAGTA #rat_gr1064436_libT2S1 21 1 sblock10520 GGTCGACCAGCTGGAAAGTAA #rat_gr619961_libT1S1 21 1 sblock10520 CTTCACCTGGTCCACTAGCC #rat_gr460145_libT1S1 20 28 sblock10520 CTTCACCTGGTCCACTAGCC #rat_gr460145_libT1S2 20 19 sblock10520 CTTCACCTGGTCCACTAGCCG #rat_gr460146_libT1S1 21 17 sblock10520 TACTTCACCTGGTCCACTAGCC #rat_gr756302_libT1S2 22 8 sblock10520 CTTCACCTGGTCCACTAGCCG #rat_gr460146_libT1S2 21 7 sblock10520 CTTCACCTGGTCCACTAGC #rat_gr460144_libT1S1 19 6 sblock10520 CTTCACCTGGTCCACTAGCCGTC #rat_gr460148_libT1S2 23 6 sblock10520 CTTCACCTGGTCCACTAGC #rat_gr460144_libT1S2 19 5 sblock10520 TACTTCACCTGGTCCACTAG #rat_gr756300_libT1S1 20 4 sblock10520 TACTTCACCTGGTCCACTAGC #rat_gr756301_libT1S1 21 4 sblock10520 ACTTCACCTGGTCCACTAGCC #rat_gr128528_libT1S2 21 4 sblock10520 CTTCACCTGGTCCACTAG #rat_gr460143_libT1S1 18 4 sblock10520 GTACTTCACCTGGTCCACTAGCC #rat_gr629197_libT1S2 23 3 sblock10520 TACTTCACCTGGTCCACTA #rat_gr756299_libT1S1 19 3 sblock10520 TACTTCACCTGGTCCACTAGC #rat_gr756301_libT1S2 21 3 sblock10520 TACTTCACCTGGTCCACTAGCC #rat_gr756302_libT1S1 22 3 sblock10520 TTCACCTGGTCCACTAGCCG #rat_gr1111005_libT1S2 20 3 sblock10520 GTACTTCACCTGGTCCACT #rat_gr629195_libT1S1 19 2 sblock10520 TACTTCACCTGGTCCACT #rat_gr756298_libT1S1 18 2 sblock10520 TACTTCACCTGGTCCACTA #rat_gr756299_libT1S2 19 2 sblock10520 TACTTCACCTGGTCCACTAG #rat_gr756300_libT1S2 20 2 sblock10520 ACTTCACCTGGTCCACTAG #rat_gr128526_libT1S1 19 2 sblock10520 ACTTCACCTGGTCCACTAGCC #rat_gr128528_libT1S1 21 2 sblock10520 CTTCACCTGGTCCACTAGCC #rat_gr460145_libT5S2 20 2 sblock10520 CTTCACCTGGTCCACTAGCCGTC #rat_gr460148_libT1S1 23 2 sblock10520 CTTCACCTGGTCCACTAGCCGTC #rat_gr460148_libT5S2 23 2 sblock10520 TTCACCTGGTCCACTAGCC #rat_gr1111004_libT1S1 19 2 sblock10520 TGTTTCTAATGTACTTCACCT #rat_gr1094308_libT2S2 21 1 sblock10520 ATGTACTTCACCTGGTCCACTA #rat_gr236314_libT1S2 22 1 sblock10520 TGTACTTCACCTGGTCCACTAGCC #rat_gr1075773_libT1S1 24 1 sblock10520 GTACTTCACCTGGTCCAC #rat_gr629194_libT1S1 18 1 sblock10520 GTACTTCACCTGGTCCACTAGC #rat_gr629196_libT1S2 22 1 sblock10520 GTACTTCACCTGGTCCACTAGCC #rat_gr629197_libT1S1 23 1 sblock10520 TACTTCACCTGGTCCACT #rat_gr756298_libT1S2 18 1 sblock10520 TACTTCACCTGGTCCACTAGCC #rat_gr756302_libT2S1 22 1 sblock10520 ACTTCACCTGGTCCACTAGC #rat_gr128527_libT1S1 20 1 sblock10520 ACTTCACCTGGTCCACTAGCC #rat_gr128528_libT5S2 21 1 sblock10520 ACTTCACCTGGTCCACTAGCCGT #rat_gr128529_libMirbase_rno-miR-412 23 1 sblock10520 CTTCACCTGGTCCACTAG #rat_gr460143_libT1S2 18 1 sblock10520 CTTCACCTGGTCCACTAGCCGT #rat_gr460147_libT1S2 22 1 sblock10520 TTCACCTGGTCCACTAGC #rat_gr1111003_libT1S2 18 1 sblock10520 TTCACCTGGTCCACTAGCC #rat_gr1111004_libT1S2 19 1 sblock10520 ---------------GGGACGGATGGTCGACCAGCTGGAAAGTAATTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCGGT------------------ humanZ41p83 CCATTCTGGGGTACGGGGATGGATGGTCGACCAGTTGGAAAGTAATTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCCGTATCCGCTGCAGCCTGTGG mouseZ48p83 -CGCTCTGGGGTAT-GGGACGGATGGTCGACCAGCTGGAAAGTAATTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCGGTGCCCGCTGCAGCCTGCG- **** ************** *********************************************** ** sblock10520 >>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>. #ENSRNOT00000053613 ENSRNOG00000035490 rno-mir-412 sblock10520 ..(((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))... 1.000 -26.30 # humanZ41p83 ((((...((.((((((..(((((((((.((((((.(((..((((((((....)))).))))))).)))))).....)))))))))..))).)))..)).)))) 0.988 -38.40 # mouseZ48p83 (((.((((((((( ..(((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).))))).))))))....)))...))) 0.847 -37.50 # #sblock10520 chromosome:6:134424656:134424725:1 Same_strand|Exonic_non-coding|ENSRNOT00000053613|ENSRNOG00000035490 ## Same_strand|Boundary_non-coding|ENSRNOT00000053613|ENSRNOG00000035490 ## ENSRNOG00000035490|miRNA|rno-mir-412|rno-mir-412 [Source:miRBase;Acc:MI0003488] ## {MIR: rno-mir-412} #humanZ41p83 chromosome:14:100601532:100601634:1 Same_strand|Boundary_non-coding|ENST00000362142|ENSG00000199012|miRNA|hsa-mir-412 [Source:miRBase;Acc:MI0002464] ## {SimpF: oe = 0.96 0 CpG} ## {MIR: hsa-mir-412} #mouseZ48p83 chromosome:12:110981492:110981591:1 Same_strand|Boundary_non-coding|ENSMUST00000083636|ENSMUSG00000065570|miRNA|mmu-mir-412 [Source:miRBase;Acc:MI0001164] ## {MIR: mmu-mir-412} ========== sblock10521 (miRBase rno-mir-369) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10521: 0.001 randfold humanZ44p83_sblock10521: 0.001 randfold mouseZ52p83_sblock10521: 0.001 #forester humanZ44p83_sblock10521: 0.902772 forester mouseZ52p83_sblock10521: 0.972333 #identity: 97.07 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT1S1 18 985 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT1S1 22 852 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT1S2 18 850 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT1S2 22 810 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT1S1 20 804 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT1S2 20 656 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT1S1 19 153 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT1S2 19 128 sblock10521 AGATCGACCGTGTTATATTCG #rat_gr147358_libT1S2 21 33 sblock10521 AGATCGACCGTGTTATATTCG #rat_gr147358_libT1S1 21 30 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT5S2 18 12 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT5S2 20 12 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT3S2 18 9 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT3S1 18 8 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT5S1 20 8 sblock10521 AGATCGACCGTGTTATATTCGCT #rat_gr147360_libT1S2 23 8 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT3S2 22 6 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT5S2 22 6 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT3S1 20 5 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT4S2 18 4 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT4S2 20 4 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT4S2 22 4 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT5S1 22 4 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT5S1 18 3 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT5S2 19 3 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT2S2 20 3 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT3S2 20 3 sblock10521 AGATCGACCGTGTTATATTCGCT #rat_gr147360_libT1S1 23 3 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT2S2 22 2 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT4S1 22 2 sblock10521 GGAGATCGACCGTGTTAT #rat_gr587544_libT1S2 18 1 sblock10521 GAGATCGACCGTGTTATA #rat_gr506233_libT1S1 18 1 sblock10521 GAGATCGACCGTGTTATAT #rat_gr506234_libT1S1 19 1 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT2S1 18 1 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT2S2 18 1 sblock10521 AGATCGACCGTGTTATAT #rat_gr147355_libT4S1 18 1 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT3S1 19 1 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT3S2 19 1 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT4S2 19 1 sblock10521 AGATCGACCGTGTTATATT #rat_gr147356_libT5S1 19 1 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT2S1 20 1 sblock10521 AGATCGACCGTGTTATATTC #rat_gr147357_libT4S1 20 1 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libMirbase_rno-miR-369-5p 22 1 sblock10521 AGATCGACCGTGTTATATTCGC #rat_gr147359_libT2S1 22 1 sblock10521 AGATCGACCGTGTTATATTCGCTT #rat_gr147361_libT1S2 24 1 sblock10521 CGACCGTGTTATATTCGC #rat_gr389078_libT1S1 18 1 sblock10521 CGACCGTGTTATATTCGC #rat_gr389078_libT1S2 18 1 sblock10521 GTGTTATATTCGCTTAGC #rat_gr655419_libT1S2 18 1 sblock10521 AATAATACATGGTTGATCT #rat_gr58539_libT1S1 19 27 sblock10521 AATAATACATGGTTGATCTTT #rat_gr58541_libT1S1 21 26 sblock10521 GAATAATACATGGTTGATCT #rat_gr488888_libT1S1 20 25 sblock10521 AATAATACATGGTTGATC #rat_gr58538_libT1S1 18 22 sblock10521 AATAATACATGGTTGATCTT #rat_gr58540_libT1S1 20 21 sblock10521 AATAATACATGGTTGATC #rat_gr58538_libT1S2 18 20 sblock10521 AATAATACATGGTTGATCT #rat_gr58539_libT1S2 19 19 sblock10521 AATAATACATGGTTGATCTTTT #rat_gr58542_libT1S1 22 17 sblock10521 GAATAATACATGGTTGATC #rat_gr488887_libT1S1 19 14 sblock10521 GAATAATACATGGTTGATCTT #rat_gr488889_libT1S1 21 13 sblock10521 GAATAATACATGGTTGATCTTT #rat_gr488890_libT1S1 22 12 sblock10521 AATAATACATGGTTGATCTTT #rat_gr58541_libT1S2 21 10 sblock10521 AATAATACATGGTTGATCTT #rat_gr58540_libT1S2 20 9 sblock10521 GAATAATACATGGTTGATCTT #rat_gr488889_libT1S2 21 8 sblock10521 GAATAATACATGGTTGATCTTT #rat_gr488890_libT1S2 22 7 sblock10521 GAATAATACATGGTTGATC #rat_gr488887_libT1S2 19 6 sblock10521 GAATAATACATGGTTGATCT #rat_gr488888_libT1S2 20 6 sblock10521 GAATAATACATGGTTGAT #rat_gr488886_libT1S2 18 4 sblock10521 GAATAATACATGGTTGATCTTTT #rat_gr488891_libT1S1 23 3 sblock10521 GAATAATACATGGTTGATCTTTT #rat_gr488891_libT1S2 23 3 sblock10521 AATAATACATGGTTGATCTTTT #rat_gr58542_libT1S2 22 3 sblock10521 GAATAATACATGGTTGAT #rat_gr488886_libT1S1 18 2 sblock10521 AATAATACATGGTTGATCTTTTC #rat_gr58543_libT1S1 23 2 sblock10521 CGAATAATACATGGTTGA #rat_gr388401_libT1S1 18 1 sblock10521 CGAATAATACATGGTTGATC #rat_gr388402_libT1S1 20 1 sblock10521 CGAATAATACATGGTTGATC #rat_gr388402_libT1S2 20 1 sblock10521 GAATAATACATGGTTGATCT #rat_gr488888_libT5S2 20 1 sblock10521 GAATAATACATGGTTGATCTTTTC #rat_gr488892_libT1S1 24 1 sblock10521 GAATAATACATGGTTGATCTTTTCT #rat_gr488893_libT1S1 25 1 sblock10521 AATAATACATGGTTGATCTTT #rat_gr58541_libMirbase_rno-miR-369-3p 21 1 sblock10521 AATAATACATGGTTGATCTTTT #rat_gr58542_libT4S1 22 1 sblock10521 AATAATACATGGTTGATCTTTT #rat_gr58542_libT5S1 22 1 sblock10521 ATAATACATGGTTGATCT #rat_gr206201_libT1S1 18 1 sblock10521 ATAATACATGGTTGATCT #rat_gr206201_libT1S2 18 1 sblock10521 ATAATACATGGTTGATCTT #rat_gr206202_libT1S1 19 1 sblock10521 ATAATACATGGTTGATCTTT #rat_gr206203_libT1S1 20 1 sblock10521 TAATACATGGTTGATCTTT #rat_gr730909_libT1S1 19 1 sblock10521 ---------------GGTACTTGAAGGGAGATCGACCGTGTTATATTCGCTTAGCTGACTTCGAATAATACATGGTTGATCTTTTCTCAGTATC---------------- humanZ44p83 --------------TGGTACTTGAAGGGAGATCGACCGTGTTATATTCGCTTTATTGACTTCGAATAATACATGGTTGATCTTTTCTCAGTATCA--------------- mouseZ52p83 CTCAACACCTCTGCTGGTACTTGAAGGGAGATCGACCGTGTTATATTCGCTTGGCTGACTTCGAATAATACATGGTTGATCTTTTCTCAGTATCAACGCTCAGCTTGGAG ************************************* *************************************** sblock10521 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053620 ENSRNOG00000035497 rno-mir-369 sblock10521 ((((((.((..(((((((((((((((..((((((...((....)).))))))..)))))))))))))))..)))))))) 1.000 -34.60 # humanZ44p83 .(((((.(((..(((((((((((((((..((((((............))))))..)))))))))))))))..)))))))). 1.000 -35.20 # mouseZ52p83 (((.....((..((((((((.(((..(((((((((((((((..((((((...((....)).))))))..)))))))))))))))..)))))))))..))..))....))) 0.929 -40.40 # #sblock10521 chromosome:6:134424778:134424856:1 Same_strand|Exonic_non-coding|ENSRNOT00000053620|ENSRNOG00000035497 ## ENSRNOG00000035497|miRNA|rno-mir-369|rno-mir-369 [Source:miRBase;Acc:MI0003551] ## {MIR: rno-mir-369} #humanZ44p83 chromosome:14:100601682:100601762:1 Same_strand|Boundary_non-coding|ENST00000362155|ENSG00000199025|miRNA|hsa-mir-369 [Source:miRBase;Acc:MI0000777] ## {SimpF: oe = 0.96 0 CpG,rank = 1 1 FirstEF} ## {MIR: hsa-mir-369} #mouseZ52p83 chromosome:12:110981613:110981722:1 Same_strand|Boundary_non-coding|ENSMUST00000083627|ENSMUSG00000065561|miRNA|mmu-mir-369 [Source:miRBase;Acc:MI0003535] ## {MIR: mmu-mir-369} ========== sblock10522 (miRBase rno-mir-410) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10522: 0.001 randfold humanZ1p84_sblock10522: 0.001 randfold mouseZ1p84_sblock10522: 0.001 #forester humanZ1p84_sblock10522: 0.977787 forester mouseZ1p84_sblock10522: 1 #identity: 97.07 sblock10522 AGGTTGTCTGTGATGAGTTCGC #rat_gr193910_libT1S2 22 4 sblock10522 AGGTTGTCTGTGATGAGTT #rat_gr193908_libT1S1 19 1 sblock10522 AGGTTGTCTGTGATGAGTTC #rat_gr193909_libT1S1 20 1 sblock10522 AGGTTGTCTGTGATGAGTTC #rat_gr193909_libT1S2 20 1 sblock10522 AGGTTGTCTGTGATGAGTTC #rat_gr193909_libT5S2 20 1 sblock10522 AATATAACACAGATGGCCTG #rat_gr59136_libT1S1 20 124 sblock10522 AATATAACACAGATGGCC #rat_gr59133_libT1S1 18 91 sblock10522 AATATAACACAGATGGCCTG #rat_gr59136_libT1S2 20 74 sblock10522 AATATAACACAGATGGCC #rat_gr59133_libT1S2 18 69 sblock10522 AATATAACACAGATGGCCTGT #rat_gr59137_libT1S1 21 48 sblock10522 AATATAACACAGATGGCCT #rat_gr59134_libT1S1 19 35 sblock10522 AATATAACACAGATGGCCTGT #rat_gr59137_libT1S2 21 27 sblock10522 AATATAACACAGATGGCCT #rat_gr59134_libT1S2 19 19 sblock10522 AATATAACACAGATGGCCTGTT #rat_gr59138_libT1S1 22 3 sblock10522 AATATAACACAGATGGCCTGTTT #rat_gr59139_libT1S1 23 3 sblock10522 ATATAACACAGATGGCCTGTTT #rat_gr210941_libT1S1 22 2 sblock10522 TGACGAATATAACACAGAT #rat_gr936448_libT1S1 19 1 sblock10522 TGACGAATATAACACAGATG #rat_gr936449_libT1S1 20 1 sblock10522 CGAATATAACACAGATGGCCT #rat_gr388429_libT1S2 21 1 sblock10522 CGAATATAACACAGATGGCCTG #rat_gr388430_libT1S1 22 1 sblock10522 GAATATAACACAGATGGC #rat_gr489094_libT1S1 18 1 sblock10522 AATATAACACAGATGGCC #rat_gr59133_libT3S2 18 1 sblock10522 AATATAACACAGATGGCC #rat_gr59133_libT5S1 18 1 sblock10522 AATATAACACAGATGGCCT #rat_gr59134_libT3S2 19 1 sblock10522 AATATAACACAGATGGCCTGT #rat_gr59137_libMirbase_rno-miR-410 21 1 sblock10522 AATATAACACAGATGGCCTGT #rat_gr59137_libT5S2 21 1 sblock10522 ATATAACACAGATGGCCTG #rat_gr210939_libT1S1 19 1 sblock10522 ATATAACACAGATGGCCTG #rat_gr210939_libT1S2 19 1 sblock10522 ATATAACACAGATGGCCTGT #rat_gr210940_libT1S1 20 1 sblock10522 TATAACACAGATGGCCTG #rat_gr790520_libT1S1 18 1 sblock10522 -------------------ACTTGAGGAGAGGTTGTCTGTGATGAGTTCGC-TTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACC--------------- humanZ1p84 GC--------ACTCTGGGTACCTGAGAAGAGGTTGTCTGTGATGAGTTCGCTTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACC--------------- mouseZ1p84 GCTGCGGTCAACACTGGGTACTTGAGGAGAGGTTGTCTGTGATGAGTTCGC-TTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACCACCTGCCACTCCGGT ** **** ************************ *************************************** **** sblock10522 .>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >.... #ENSRNOT00000053680 ENSRNOG00000035557 rno-mir-410 sblock10522 ..(((((((.((((..((((((.((.(((((( .........).))))).)).))))))..)))).))))))).... 1.000 -30.20 # humanZ1p84 .. ......((((.(((((((.((((..((((((.((.(((((.((........))))))).)).))))))..)))).))))))))))) 0.998 -36.50 # mouseZ1p84 ((((.(((...((...((((.(((((((.((((..((((((.((.(((((. ((.......))))))).)).))))))..)))).)))))))))))...))..))).)))) 0.974 -39.70 # #sblock10522 chromosome:6:134425082:134425157:1 Same_strand|Exonic_non-coding|ENSRNOT00000053680|ENSRNOG00000035557 ## Same_strand|Boundary_non-coding|ENSRNOT00000053680|ENSRNOG00000035557 ## ENSRNOG00000035557|miRNA|rno-mir-410|rno-mir-410 [Source:miRBase;Acc:MI0006143] ## {MIR: rno-mir-410} #humanZ1p84 chromosome:14:100601994:100602081:1 Same_strand|Boundary_non-coding|ENST00000362222|ENSG00000199092|miRNA|hsa-mir-410 [Source:miRBase;Acc:MI0002465] ## {SimpF: oe = 0.96 0 CpG} ## {MIR: hsa-mir-410} #mouseZ1p84 chromosome:12:110981910:110982019:1 Same_strand|Boundary_non-coding|ENSMUST00000083563|ENSMUSG00000065497|miRNA|mmu-mir-410 [Source:miRBase;Acc:MI0001161] ## {MIR: mmu-mir-410} ========== sblock10529 (miRBase rno-mir-203) [miRNAknown_cloningHIGH_shortStem_randfoldOK] ========== #randfold sblock10529: 0.001 randfold humanZ3p84_sblock10529: 0.001 randfold mouseZ3p84_sblock10529: 0.001 #forester humanZ3p84_sblock10529: 1 forester mouseZ3p84_sblock10529: 0.885516 #identity: 94.72 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT5S1 21 17 sblock10529 AGTGGTTCTTAACAGTTCA #rat_gr201244_libT5S1 19 7 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT5S2 21 7 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT2S1 21 6 sblock10529 AGTGGTTCTTAACAGTTCAACA #rat_gr201247_libT5S1 22 5 sblock10529 AGTGGTTCTTAACAGTTCA #rat_gr201244_libT2S2 19 4 sblock10529 AGTGGTTCTTAACAGTTCAA #rat_gr201245_libT2S2 20 4 sblock10529 AGTGGTTCTTAACAGTTCAACA #rat_gr201247_libT5S2 22 4 sblock10529 AGTGGTTCTTAACAGTTCAACAG #rat_gr201248_libT5S2 23 4 sblock10529 AGTGGTTCTTAACAGTTC #rat_gr201243_libT5S1 18 3 sblock10529 AGTGGTTCTTAACAGTTCAA #rat_gr201245_libT5S2 20 3 sblock10529 AGTGGTTCTTAACAGTTCAACA #rat_gr201247_libT2S2 22 3 sblock10529 AGTGGTTCTTAACAGTTC #rat_gr201243_libT2S1 18 2 sblock10529 AGTGGTTCTTAACAGTTC #rat_gr201243_libT2S2 18 2 sblock10529 AGTGGTTCTTAACAGTTC #rat_gr201243_libT3S1 18 2 sblock10529 AGTGGTTCTTAACAGTTCA #rat_gr201244_libT2S1 19 2 sblock10529 AGTGGTTCTTAACAGTTCA #rat_gr201244_libT3S1 19 2 sblock10529 AGTGGTTCTTAACAGTTCA #rat_gr201244_libT4S1 19 2 sblock10529 AGTGGTTCTTAACAGTTCAA #rat_gr201245_libT1S2 20 2 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT1S1 21 2 sblock10529 AGTGGTTCTTAACAGTTCAACA #rat_gr201247_libT1S1 22 2 sblock10529 AGTGGTTCTTAACAGTTCAACAG #rat_gr201248_libT2S1 23 2 sblock10529 AGTGGTTCTTAACAGTTCAACAGT #rat_gr201249_libT2S1 24 2 sblock10529 AGTGGTTCTTAACAGTTC #rat_gr201243_libT1S2 18 1 sblock10529 AGTGGTTCTTAACAGTTC #rat_gr201243_libT5S2 18 1 sblock10529 AGTGGTTCTTAACAGTTCA #rat_gr201244_libT1S2 19 1 sblock10529 AGTGGTTCTTAACAGTTCAA #rat_gr201245_libT2S1 20 1 sblock10529 AGTGGTTCTTAACAGTTCAA #rat_gr201245_libT3S2 20 1 sblock10529 AGTGGTTCTTAACAGTTCAA #rat_gr201245_libT5S1 20 1 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT1S2 21 1 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT2S2 21 1 sblock10529 AGTGGTTCTTAACAGTTCAAC #rat_gr201246_libT4S1 21 1 sblock10529 AGTGGTTCTTAACAGTTCAACA #rat_gr201247_libT2S1 22 1 sblock10529 AGTGGTTCTTAACAGTTCAACA #rat_gr201247_libT3S1 22 1 sblock10529 AGTGGTTCTTAACAGTTCAACAG #rat_gr201248_libT5S1 23 1 sblock10529 AGTGGTTCTTAACAGTTCAACAGTTC #rat_gr201250_libT5S1 26 1 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT5S1 22 817 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT5S1 20 703 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT5S2 20 465 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT5S2 22 392 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT5S1 21 341 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT5S1 18 330 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT2S1 22 286 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT5S2 18 274 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT5S1 19 240 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT5S2 19 224 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT2S2 20 218 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT2S2 22 208 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT2S1 20 204 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT2S1 18 171 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT2S2 18 167 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT2S1 21 148 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT5S1 24 142 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT2S2 21 140 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT5S2 21 129 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT2S1 19 104 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT2S2 19 100 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT5S2 24 73 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT2S1 21 72 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT3S1 20 64 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT1S1 22 63 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT3S1 18 62 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT1S1 20 60 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT2S2 21 59 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT5S1 21 46 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT1S2 20 45 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT1S2 22 42 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT3S1 22 42 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT4S2 20 38 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT1S1 18 37 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT5S1 19 35 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT5S2 19 35 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT2S1 24 34 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT3S2 20 33 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT2S2 24 32 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT2S2 18 31 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT3S1 21 29 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT3S2 18 27 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT1S2 18 26 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT1S1 21 26 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT2S1 19 26 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT5S2 18 24 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT2S1 18 22 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT5S2 21 22 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT3S2 19 21 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT2S2 19 21 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT1S1 19 20 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT3S1 19 19 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT5S1 18 19 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT4S2 18 18 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT3S2 22 18 sblock10529 GTGAAATGTTTAGGACCACT #rat_gr643036_libT4S1 20 17 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT4S2 22 17 sblock10529 GTGAAATGTTTAGGACCA #rat_gr643034_libT4S1 18 16 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT1S2 19 16 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT3S2 21 16 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT5S1 23 16 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT5S2 19 15 sblock10529 TGAAATGTTTAGGACCACTAGAC #rat_gr924196_libT5S2 23 15 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT5S1 19 14 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libT4S1 22 14 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT1S2 21 13 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT5S2 23 13 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT1S1 24 13 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT4S2 21 12 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT3S2 21 11 sblock10529 TGTGAAATGTTTAGGACCACT #rat_gr1082795_libT5S1 21 10 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT3S1 24 10 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT1S1 21 10 sblock10529 TGAAATGTTTAGGACCACTAGAC #rat_gr924196_libT2S1 23 10 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT4S2 19 9 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT2S1 23 9 sblock10529 TGAAATGTTTAGGACCACTAGAC #rat_gr924196_libT5S1 23 9 sblock10529 TGTGAAATGTTTAGGACCACT #rat_gr1082795_libT5S2 21 8 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT1S2 24 8 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT2S2 20 8 sblock10529 TGTGAAATGTTTAGGACC #rat_gr1082792_libT5S2 18 7 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT2S1 19 7 sblock10529 GTGAAATGTTTAGGACCACTA #rat_gr643037_libT4S1 21 7 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT5S1 20 7 sblock10529 TGAAATGTTTAGGACCACTAGAC #rat_gr924196_libT2S2 23 7 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT2S2 23 6 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT3S1 19 6 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT2S1 20 6 sblock10529 GAAATGTTTAGGACCACTAG #rat_gr481505_libT5S1 20 6 sblock10529 TGTGAAATGTTTAGGACCAC #rat_gr1082794_libT5S2 20 5 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT3S1 23 5 sblock10529 TGTGAAATGTTTAGGACCAC #rat_gr1082794_libT5S1 20 4 sblock10529 TGTGAAATGTTTAGGACCACTAG #rat_gr1082797_libT5S1 23 4 sblock10529 TGTGAAATGTTTAGGACCACTAG #rat_gr1082797_libT5S2 23 4 sblock10529 GTGAAATGTTTAGGACCAC #rat_gr643035_libT4S1 19 4 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT3S2 24 4 sblock10529 GTGAAATGTTTAGGACCACTAGACC #rat_gr643041_libT5S2 25 4 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT3S1 21 4 sblock10529 TGTGAAATGTTTAGGACC #rat_gr1082792_libT2S1 18 3 sblock10529 TGTGAAATGTTTAGGACC #rat_gr1082792_libT5S1 18 3 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT2S2 19 3 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT3S2 19 3 sblock10529 GTGAAATGTTTAGGACCACTAGACC #rat_gr643041_libT2S2 25 3 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT1S1 18 3 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT1S2 18 3 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT1S2 19 3 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT4S2 19 3 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT1S2 21 3 sblock10529 TTGTGAAATGTTTAGGACCA #rat_gr1149552_libT5S1 20 2 sblock10529 TTGTGAAATGTTTAGGACCACT #rat_gr1149554_libT2S1 22 2 sblock10529 TTGTGAAATGTTTAGGACCACT #rat_gr1149554_libT5S1 22 2 sblock10529 TTGTGAAATGTTTAGGACCACTA #rat_gr1149555_libT2S1 23 2 sblock10529 TGTGAAATGTTTAGGACC #rat_gr1082792_libT1S1 18 2 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT1S1 19 2 sblock10529 TGTGAAATGTTTAGGACCAC #rat_gr1082794_libT2S2 20 2 sblock10529 TGTGAAATGTTTAGGACCACTAG #rat_gr1082797_libT2S1 23 2 sblock10529 TGTGAAATGTTTAGGACCACTAG #rat_gr1082797_libT2S2 23 2 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT4S1 24 2 sblock10529 GTGAAATGTTTAGGACCACTAGACC #rat_gr643041_libT2S1 25 2 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT1S1 19 2 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT3S2 19 2 sblock10529 TGAAATGTTTAGGACCACT #rat_gr924192_libT4S1 19 2 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT1S2 20 2 sblock10529 TGAAATGTTTAGGACCACTAG #rat_gr924194_libT4S1 21 2 sblock10529 TGAAATGTTTAGGACCACTAGA #rat_gr924195_libT5S2 22 2 sblock10529 GAAATGTTTAGGACCACTAG #rat_gr481505_libT5S2 20 2 sblock10529 TTGTGAAATGTTTAGGACC #rat_gr1149551_libT5S1 19 1 sblock10529 TTGTGAAATGTTTAGGACCA #rat_gr1149552_libT2S2 20 1 sblock10529 TTGTGAAATGTTTAGGACCAC #rat_gr1149553_libT2S1 21 1 sblock10529 TTGTGAAATGTTTAGGACCAC #rat_gr1149553_libT5S1 21 1 sblock10529 TTGTGAAATGTTTAGGACCAC #rat_gr1149553_libT5S2 21 1 sblock10529 TTGTGAAATGTTTAGGACCACTA #rat_gr1149555_libT5S1 23 1 sblock10529 TGTGAAATGTTTAGGACC #rat_gr1082792_libT2S2 18 1 sblock10529 TGTGAAATGTTTAGGACCA #rat_gr1082793_libT1S2 19 1 sblock10529 TGTGAAATGTTTAGGACCAC #rat_gr1082794_libT2S1 20 1 sblock10529 TGTGAAATGTTTAGGACCACT #rat_gr1082795_libT2S2 21 1 sblock10529 TGTGAAATGTTTAGGACCACTA #rat_gr1082796_libT5S1 22 1 sblock10529 TGTGAAATGTTTAGGACCACTA #rat_gr1082796_libT5S2 22 1 sblock10529 TGTGAAATGTTTAGGACCACTAGAC #rat_gr1082798_libT5S2 25 1 sblock10529 GTGAAATGTTTAGGACCACTAG #rat_gr643038_libMirbase_rno-miR-203 22 1 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT1S1 23 1 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT4S1 23 1 sblock10529 GTGAAATGTTTAGGACCACTAGA #rat_gr643039_libT4S2 23 1 sblock10529 GTGAAATGTTTAGGACCACTAGAC #rat_gr643040_libT4S2 24 1 sblock10529 GTGAAATGTTTAGGACCACTAGACC #rat_gr643041_libT1S2 25 1 sblock10529 GTGAAATGTTTAGGACCACTAGACC #rat_gr643041_libT3S1 25 1 sblock10529 GTGAAATGTTTAGGACCACTAGACC #rat_gr643041_libT3S2 25 1 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT3S2 18 1 sblock10529 TGAAATGTTTAGGACCAC #rat_gr924191_libT4S1 18 1 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT1S1 20 1 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT3S1 20 1 sblock10529 TGAAATGTTTAGGACCACTA #rat_gr924193_libT5S2 20 1 sblock10529 TGAAATGTTTAGGACCACTAGA #rat_gr924195_libT2S1 22 1 sblock10529 TGAAATGTTTAGGACCACTAGA #rat_gr924195_libT3S1 22 1 sblock10529 TGAAATGTTTAGGACCACTAGA #rat_gr924195_libT5S1 22 1 sblock10529 TGAAATGTTTAGGACCACTAGAC #rat_gr924196_libT3S1 23 1 sblock10529 GAAATGTTTAGGACCACT #rat_gr481504_libT5S2 18 1 sblock10529 GAAATGTTTAGGACCACTAG #rat_gr481505_libT2S1 20 1 sblock10529 ACCCGGCGCGCACGGCAGC #rat_gr98445_libT5S1 19 1 sblock10529 -------------------GCGCGCCTGGTCCAGTGGTTCTTAACAGTTCAACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACCCGGCGCGCACGGCAGCGGCGA--- humanZ3p84 CCGACGGTGTTGGGGACTCGCGCGCTGGGTCCAGTGGTTCTTAACAGTTCAACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACCCGGCGGGCGCGGCGACAGCGACGG mouseZ3p84 -------------------GCGCGCCTGGTCCAGTGGTTCTTGACAGTTCAACAGTTCTGTAGCACAATTGTGAAATGTTTAGGACCACTAGACCCGGCGCGC---------------- ****** *************** ********************* *********************************** ** sblock10529 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053612 ENSRNOG00000035489 rno-mir-203 sblock10529 (((((((.((((.(((((((((.((((.((((.((((((......).))))))))).)))).))))))))).)))).)))))))...((....)).. 1.000 -49.20 # humanZ3p84 (((.((.(((((....(((((.(((((((((.(((((((((.((((.(((.(((((..((.....)))))))))).)))).))))))))).))))))))).))).))))))).)).))) 0.998 -59.70 # mouseZ3p84 (((((((.((((.(((((((((.((((.(((.((((((.((...)).))))))))).)))).))))))))).)))).))))))) 0.998 -47.20 # #sblock10529 chromosome:6:136932089:136932185:1 Same_strand|Exonic_non-coding|ENSRNOT00000053612|ENSRNOG00000035489 ## ENSRNOG00000035489|miRNA|rno-mir-203|rno-mir-203 [Source:miRBase;Acc:MI0000945] ## {MIR: rno-mir-203} #humanZ3p84 chromosome:14:103653489:103653607:1 Same_strand|Boundary_non-coding|ENST00000384836|ENSG00000207568|miRNA|hsa-mir-203 [Source:miRBase;Acc:MI0000283] ## {SimpF: oe = 0.84 0 CpG,rank = 1 1 FirstEF} ## {MIR: hsa-mir-203} #mouseZ3p84 chromosome:12:113369087:113369170:1 Same_strand|Boundary_non-coding|ENSMUST00000083640|ENSMUSG00000065574|miRNA|mmu-mir-203 [Source:miRBase;Acc:MI0000246] ## {SimpF: oe = 0.89 -1 CpG} ## {MIR: mmu-mir-203} ========== sblock10788 (miRBase rno-mir-135a) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10788: 0.001 randfold humanZ7p84_sblock10788: 0.002 randfold mouseZ16p84_sblock10788: 0.001 #forester humanZ7p84_sblock10788: 0.971657 forester mouseZ16p84_sblock10788: 1 #identity: 98.98 sblock10788 TGTAGGGATGGAAGCCATGAA #rat_gr1076311_libT1S1 21 46 sblock10788 TGTAGGGATGGAAGCCATGAA #rat_gr1076311_libT1S2 21 28 sblock10788 TGTAGGGATGGAAGCCATGA #rat_gr1076310_libT1S1 20 20 sblock10788 TGTAGGGATGGAAGCCATGA #rat_gr1076310_libT1S2 20 14 sblock10788 TGTAGGGATGGAAGCCATG #rat_gr1076309_libT1S1 19 13 sblock10788 TGTAGGGATGGAAGCCATGAAA #rat_gr1076312_libT1S2 22 7 sblock10788 ATGTAGGGATGGAAGCCATGAA #rat_gr236364_libT1S1 22 7 sblock10788 TGTAGGGATGGAAGCCAT #rat_gr1076308_libT1S1 18 7 sblock10788 TGTAGGGATGGAAGCCAT #rat_gr1076308_libT1S2 18 7 sblock10788 ATGTAGGGATGGAAGCCATGA #rat_gr236363_libT1S2 21 5 sblock10788 TGTAGGGATGGAAGCCATG #rat_gr1076309_libT1S2 19 5 sblock10788 ATGTAGGGATGGAAGCCA #rat_gr236360_libT1S2 18 5 sblock10788 TGTAGGGATGGAAGCCATGAAA #rat_gr1076312_libT1S1 22 4 sblock10788 ATGTAGGGATGGAAGCCATGAA #rat_gr236364_libT5S1 22 3 sblock10788 ATGTAGGGATGGAAGCCAT #rat_gr236361_libT1S2 19 3 sblock10788 ATGTAGGGATGGAAGCCATGA #rat_gr236363_libT1S1 21 2 sblock10788 GTAGGGATGGAAGCCATG #rat_gr630403_libT1S1 18 2 sblock10788 ATGTAGGGATGGAAGCCA #rat_gr236360_libT1S1 18 2 sblock10788 TGTAGGGATGGAAGCCATGAAA #rat_gr1076312_libMirbase_rno-miR-135a* 22 1 sblock10788 TGTAGGGATGGAAGCCATGAAA #rat_gr1076312_libT5S1 22 1 sblock10788 TGTAGGGATGGAAGCCATGAAA #rat_gr1076312_libT5S2 22 1 sblock10788 TGTAGGGATGGAAGCCATGAA #rat_gr1076311_libT4S2 21 1 sblock10788 ATGTAGGGATGGAAGCCATGAA #rat_gr236364_libT1S2 22 1 sblock10788 TGTAGGGATGGAAGCCATGA #rat_gr1076310_libT5S2 20 1 sblock10788 ATGTAGGGATGGAAGCCATGA #rat_gr236363_libT4S2 21 1 sblock10788 ATGTAGGGATGGAAGCCATG #rat_gr236362_libT1S1 20 1 sblock10788 ATGTAGGGATGGAAGCCATG #rat_gr236362_libT1S2 20 1 sblock10788 ATGTAGGGATGGAAGCCATG #rat_gr236362_libT5S1 20 1 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT1S1 23 3357 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT1S1 18 3169 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT1S2 18 2953 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT1S2 23 2865 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT1S1 21 2368 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT1S2 21 2333 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT1S1 19 1320 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT1S2 19 1275 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT1S1 22 1023 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT1S2 22 842 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT1S1 20 830 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT1S2 20 770 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT5S2 23 151 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT5S1 23 141 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT5S1 18 128 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT5S2 18 125 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT5S1 21 114 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT5S2 21 112 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT5S2 22 102 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT5S2 19 62 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT5S1 22 50 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT5S1 19 47 sblock10788 ATGGCTTTTTATTCCTATGTGA #rat_gr234280_libT1S1 22 39 sblock10788 ATGGCTTTTTATTCCTATGTGA #rat_gr234280_libT1S2 22 38 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT5S2 20 32 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT5S1 20 28 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT3S1 18 24 sblock10788 ATGGCTTTTTATTCCTATGT #rat_gr234278_libT1S2 20 20 sblock10788 ATGGCTTTTTATTCCTATGT #rat_gr234278_libT1S1 20 19 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT4S2 23 18 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT3S1 23 17 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT4S2 18 16 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT3S1 21 15 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT4S2 21 15 sblock10788 ATGGCTTTTTATTCCTATGTG #rat_gr234279_libT1S1 21 14 sblock10788 ATGGCTTTTTATTCCTATGTG #rat_gr234279_libT1S2 21 13 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT4S1 21 13 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT3S2 18 13 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT3S1 22 12 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT4S2 19 12 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT2S1 18 12 sblock10788 ATGGCTTTTTATTCCTATG #rat_gr234277_libT1S2 19 10 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT3S1 20 10 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT3S1 19 10 sblock10788 TATGGCTTTTTATTCCTATGTGAT #rat_gr797342_libT1S1 24 9 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT2S1 19 9 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT4S1 18 9 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT3S2 23 8 sblock10788 ATGGCTTTTTATTCCTATG #rat_gr234277_libT1S1 19 7 sblock10788 TATGGCTTTTTATTCCTA #rat_gr797336_libT2S2 18 7 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT4S1 23 6 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT2S2 21 6 sblock10788 ATGGCTTTTTATTCCTAT #rat_gr234274_libT1S1 18 6 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT2S2 19 6 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT4S1 22 5 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT4S1 20 5 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT4S2 20 5 sblock10788 ATGGCTTTTTATTCCTATGTGA #rat_gr234280_libT5S2 22 4 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT3S2 22 4 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT4S2 22 4 sblock10788 ATGGCTTTTTATTCCTATGT #rat_gr234278_libT5S1 20 4 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT2S1 21 4 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT3S2 20 4 sblock10788 TATGGCTTTTTATTCCTATGTGAT #rat_gr797342_libT1S2 24 3 sblock10788 TATGGCTTTTTATTCCTATGTG #rat_gr797340_libT2S2 22 3 sblock10788 TATGGCTTTTTATTCCTATGT #rat_gr797339_libT3S2 21 3 sblock10788 GGCTTTTTATTCCTATGTGA #rat_gr601607_libT1S1 20 2 sblock10788 ATGGCTTTTTATTCCTATGTGA #rat_gr234280_libT4S2 22 2 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT2S1 23 2 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libT2S2 23 2 sblock10788 ATGGCTTTTTATTCCTAT #rat_gr234274_libT1S2 18 2 sblock10788 TATGGCTTTTTATTCCTAT #rat_gr797337_libT3S2 19 2 sblock10788 TATGGCTTTTTATTCCTATGTGAT #rat_gr797342_libT5S1 24 1 sblock10788 CTTTTTATTCCTATGTGA #rat_gr475761_libT1S2 18 1 sblock10788 GCTTTTTATTCCTATGTGA #rat_gr579591_libT1S1 19 1 sblock10788 GGCTTTTTATTCCTATGTGA #rat_gr601607_libT1S2 20 1 sblock10788 ATGGCTTTTTATTCCTATGTGA #rat_gr234280_libT3S1 22 1 sblock10788 TATGGCTTTTTATTCCTATGTGA #rat_gr797341_libMirbase_rno-miR-135a 23 1 sblock10788 GGCTTTTTATTCCTATGTG #rat_gr601606_libT1S1 19 1 sblock10788 TGGCTTTTTATTCCTATGTG #rat_gr1020105_libT1S1 20 1 sblock10788 ATGGCTTTTTATTCCTATGTG #rat_gr234279_libT3S2 21 1 sblock10788 ATGGCTTTTTATTCCTATGTG #rat_gr234279_libT5S2 21 1 sblock10788 GGCTTTTTATTCCTATGT #rat_gr601605_libT1S1 18 1 sblock10788 TGGCTTTTTATTCCTATGT #rat_gr1020104_libT1S1 19 1 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT2S1 20 1 sblock10788 TATGGCTTTTTATTCCTATG #rat_gr797338_libT2S2 20 1 sblock10788 TTATGGCTTTTTATTCCTAT #rat_gr1105704_libT1S2 20 1 sblock10788 TTATGGCTTTTTATTCCTA #rat_gr1105703_libT1S1 19 1 sblock10788 -----------AGATAAATTCACTCTAGTGCTTTATGGCTTTTTATTCCTATGTGATCGTAATAAAGTCTCATGTAGGGATGGAAGCCATGAAATACATTGTGAAAATTCA humanZ7p84 GCATCCGACCAAGATAAATTCACTCTAGTGCTTTATGGCTTTTTATTCCTATGTGATAGTAATAAAGTCTCATGTAGGGATGGAAGCCATGAAATACATTGTGAAAAATC- mouseZ16p84 ---TCCGACCAAGATAAATTCACTCTAGTGCTTTATGGCTTTTTATTCCTATGTGATCGTAATAAAGTCTCATGTAGGGATGGAAGCCATGAAATACATTGTGAA------ ********************************************** *********************************************** sblock10788 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>..... #ENSRNOT00000053652 ENSRNOG00000035529 rno-mir-135a sblock10788 .((....(((((....(((.((((((((((((.((((((((((((.(........)..)))))))))))))))))))))))).)))...)))))...)). 1.000 -34.80 # humanZ7p84 ..................(((((....(((.((((((((.((((((((((((((((.............)))))))))))))))))))))))).)))...)))))..... 0.834 -33.92 # mouseZ16p84 ...............(((((....(((.((((((((.((((((((((((((((.............)))))))))))))))))))))))).)))...))))) 0.972 -33.12 # #sblock10788 chromosome:7:29077659:29077758:-1 Same_strand|Boundary_non-coding|ENSRNOT00000053652|ENSRNOG00000035529 ## Same_strand|Exonic_non-coding|ENSRNOT00000053652|ENSRNOG00000035529 ## ENSRNOG00000035529|miRNA|rno-mir-135a|rno-mir-135a [Source:miRBase;Acc:MI0000908] ## {MIR: rno-mir-135a} #humanZ7p84 chromosome:12:96481710:96481819:1 Same_strand|Boundary_non-coding|ENST00000384854|ENSG00000207586|miRNA|hsa-mir-135a-2 [Source:miRBase;Acc:MI0000453] ## {MIR: hsa-mir-135a-2} #mouseZ16p84 chromosome:10:91534837:91534938:-1 Same_strand|Boundary_non-coding|ENSMUST00000083590|ENSMUSG00000065524|miRNA|mmu-mir-135a-2 [Source:miRBase;Acc:MI0000715] ## {MIR: mmu-mir-135a-2} ========== sblock10793 (miRBase rno-mir-331) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10793: 0.001 randfold humanZ12p84_sblock10793: 0.001 randfold mouseZ26p84_sblock10793: 0.001 #forester humanZ12p84_sblock10793: 1 forester mouseZ26p84_sblock10793: 1 #identity: 96.08 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT1S1 20 3849 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT1S2 20 3254 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT1S1 22 1223 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT1S2 19 1190 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT1S2 22 814 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT1S1 19 756 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT1S1 18 693 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT1S2 18 675 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT5S1 20 668 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT5S2 20 629 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT4S2 20 557 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT3S1 20 401 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT4S1 20 368 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT1S1 19 338 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT2S1 20 323 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT3S2 20 322 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT1S2 19 241 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT4S2 22 227 sblock10793 GCCCCTGGGCCTATCCTAGA #rat_gr548626_libT2S2 20 220 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT1S1 21 205 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT5S2 19 189 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT4S1 22 182 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT5S2 22 177 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT3S1 22 163 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT1S2 21 160 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT5S1 22 142 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT5S1 18 141 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT4S2 19 135 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT1S1 21 131 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT4S2 19 130 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT5S1 19 129 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT1S1 20 126 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT4S2 18 121 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT1S2 20 117 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT3S2 22 115 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT1S2 18 111 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT1S1 18 101 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT5S2 21 97 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT5S2 18 94 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT2S1 19 90 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT4S1 19 89 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT2S2 22 86 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT4S1 18 84 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT4S2 21 79 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT3S2 19 73 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT4S1 19 71 sblock10793 GCCCCTGGGCCTATCCTAGAAC #rat_gr548628_libT2S1 22 69 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT3S1 19 68 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT2S1 18 67 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT1S2 21 66 sblock10793 GCCCCTGGGCCTATCCTAG #rat_gr548625_libT2S2 19 64 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT3S1 18 61 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT4S2 20 60 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT3S2 18 58 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT5S2 19 56 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT1S1 23 54 sblock10793 GCCCCTGGGCCTATCCTA #rat_gr548624_libT2S2 18 52 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT5S1 19 49 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT5S1 21 48 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT1S2 23 45 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT4S2 21 45 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT3S1 21 38 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT3S1 19 38 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT2S2 21 36 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT4S1 21 33 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT3S2 21 32 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT3S2 19 30 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT2S2 19 29 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT2S1 21 26 sblock10793 CCCCTGGGCCTATCCTAGA #rat_gr353836_libT2S1 19 26 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT4S2 23 25 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libT4S1 21 25 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT5S1 20 24 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT5S2 20 24 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT5S2 18 24 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT4S2 18 23 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT2S1 20 22 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT4S1 20 22 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT3S1 20 18 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT4S1 18 17 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT1S1 22 15 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT4S1 23 15 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT2S2 20 15 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT5S1 18 15 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT1S2 22 14 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT2S2 21 14 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT5S1 21 14 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT5S2 21 14 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT3S1 21 13 sblock10793 CCCCTGGGCCTATCCTAGAA #rat_gr353837_libT3S2 20 13 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT4S2 22 12 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT3S1 18 12 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT5S2 23 11 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT2S1 21 11 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT5S1 23 10 sblock10793 CCCCTGGGCCTATCCTAGAAC #rat_gr353838_libT3S2 21 10 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT2S1 18 10 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT3S2 18 10 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT4S1 22 7 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT3S1 23 6 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT3S2 23 6 sblock10793 CCCCTGGGCCTATCCTAGAACCA #rat_gr353840_libT1S1 23 5 sblock10793 CCCCTGGGCCTATCCTAGAACCA #rat_gr353840_libT4S2 23 5 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT5S2 22 5 sblock10793 GCCCCTGGGCCTATCCTAGAACCA #rat_gr548630_libT1S1 24 3 sblock10793 GCCCCTGGGCCTATCCTAGAACCA #rat_gr548630_libT1S2 24 3 sblock10793 GCCCCTGGGCCTATCCTAGAACCA #rat_gr548630_libT4S2 24 3 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT3S1 22 3 sblock10793 CCCCTGGGCCTATCCTAG #rat_gr353835_libT2S2 18 3 sblock10793 CCCCTGGGCCTATCCTAGAACCA #rat_gr353840_libT5S1 23 2 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT2S1 22 2 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT3S2 22 2 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT2S1 23 2 sblock10793 CCCTGGGCCTATCCTAGA #rat_gr362573_libT1S1 18 2 sblock10793 CCCTGGGCCTATCCTAGA #rat_gr362573_libT4S2 18 2 sblock10793 CCCCTGGGCCTATCCTAGAACCA #rat_gr353840_libT1S2 23 1 sblock10793 CCCCTGGGCCTATCCTAGAACCA #rat_gr353840_libT4S1 23 1 sblock10793 GCCCCTGGGCCTATCCTAGAACCA #rat_gr548630_libT5S1 24 1 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT2S2 22 1 sblock10793 CCCCTGGGCCTATCCTAGAACC #rat_gr353839_libT5S1 22 1 sblock10793 GCCCCTGGGCCTATCCTAGAACC #rat_gr548629_libT2S2 23 1 sblock10793 CCTGGGCCTATCCTAGAAC #rat_gr380606_libT1S1 19 1 sblock10793 CCCTGGGCCTATCCTAGAAC #rat_gr362575_libT4S1 20 1 sblock10793 CCCTGGGCCTATCCTAGAA #rat_gr362574_libT1S2 19 1 sblock10793 GCCCCTGGGCCTATCCTAGAA #rat_gr548627_libMirbase_rno-miR-331 21 1 sblock10793 CCCTGGGCCTATCCTAGA #rat_gr362573_libT3S2 18 1 sblock10793 CCCTGGGCCTATCCTAGA #rat_gr362573_libT5S1 18 1 sblock10793 CAGATCAAACCAGGCCCCTG #rat_gr289932_libT4S1 20 1 sblock10793 CTAGGTATGGTCCCAGGGA #rat_gr413556_libT1S1 19 9 sblock10793 CTAGGTATGGTCCCAGGGA #rat_gr413556_libT1S2 19 8 sblock10793 TCTAGGTATGGTCCCAGGGA #rat_gr894047_libT1S2 20 4 sblock10793 CTAGGTATGGTCCCAGGGA #rat_gr413556_libT5S2 19 2 sblock10793 TCTAGGTATGGTCCCAGGGA #rat_gr894047_libT5S2 20 2 sblock10793 CTAGGTATGGTCCCAGGG #rat_gr413555_libT5S2 18 2 sblock10793 TTGTTCTAGGTATGGTCCC #rat_gr1151445_libT1S1 19 2 sblock10793 CTAGGTATGGTCCCAGGGATCCC #rat_gr413558_libT1S1 23 1 sblock10793 CTAGGTATGGTCCCAGGGATCCC #rat_gr413558_libT1S2 23 1 sblock10793 CTAGGTATGGTCCCAGGGATC #rat_gr413557_libT1S2 21 1 sblock10793 CTAGGTATGGTCCCAGGGATC #rat_gr413557_libT3S1 21 1 sblock10793 CTAGGTATGGTCCCAGGGATC #rat_gr413557_libT4S1 21 1 sblock10793 TAGGTATGGTCCCAGGGA #rat_gr782236_libT4S2 18 1 sblock10793 CTAGGTATGGTCCCAGGGA #rat_gr413556_libT2S2 19 1 sblock10793 CTAGGTATGGTCCCAGGGA #rat_gr413556_libT3S1 19 1 sblock10793 CTAGGTATGGTCCCAGGGA #rat_gr413556_libT4S2 19 1 sblock10793 TCTAGGTATGGTCCCAGGGA #rat_gr894047_libT1S1 20 1 sblock10793 TCTAGGTATGGTCCCAGGG #rat_gr894046_libT1S1 19 1 sblock10793 TCTAGGTATGGTCCCAGG #rat_gr894045_libT3S2 18 1 sblock10793 TGTTCTAGGTATGGTCCC #rat_gr1092312_libT1S1 18 1 sblock10793 TTGTTCTAGGTATGGTCCC #rat_gr1151445_libT3S2 19 1 sblock10793 TTGTTCTAGGTATGGTCC #rat_gr1151444_libT2S1 18 1 sblock10793 GGTCTTGTTTGGGTTTGTTC #rat_gr620581_libT1S1 20 2 sblock10793 GTCTTGTTTGGGTTTGTTC #rat_gr642649_libT3S1 19 1 sblock10793 GGTCTTGTTTGGGTTTGTTC #rat_gr620581_libT3S1 20 1 sblock10793 TGGTCTTGTTTGGGTTTGTTC #rat_gr1065686_libT1S1 21 1 sblock10793 TGGTCTTGTTTGGGTTTGT #rat_gr1065685_libT1S1 19 1 sblock10793 CTGGTCTTGTTTGGGTTTGT #rat_gr452209_libT1S1 20 1 sblock10793 CTGGTCTTGTTTGGGTTTG #rat_gr452208_libT1S1 19 1 sblock10793 TCTGGTCTTGTTTGGGTTTG #rat_gr908716_libT1S1 20 1 sblock10793 -----GAGTCTGGTCTTGTTTGGGTTTGTTCTAGGTATGGTCCCAGGGATCCCAGATCAAACCAGGCCCCTGGGCCTATCCTAGAACCAACCTAAACCCAT------------- humanZ12p84 CCAAGGAGTTTGGTTTTGTTTGGGTTTGTTCTAGGTATGGTCCCAGGGATCCCAGATCAAACCAGGCCCCTGGGCCTATCCTAGAACCAACCTAAGCTCGCGCATCATTCCTGG mouseZ26p84 CCAAGGAGTCTGGTTTTGTTTGGGTTTGTTCTAGGTATGGTCCCAGGGATCCCAGATCAAACCAGGCCCCTGGGCCTATCCTAGAACCAACCTAAACCCGTGCATCATTCCTGG **** **** ******************************************************************************** * * sblock10793 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053666 ENSRNOG00000035543 rno-mir-331 sblock10793 .....(((....(((((((((.((((((((.((((.(((((((..(.............)..))))))).)))))))))))).)))))))))))). 1.000 -44.32 # humanZ12p84 ((.((((((.((((...(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))..)).))..)))))))) 0.998 -52.00 # mouseZ26p84 ((.((((((...((...(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))....))...)))))))) 0.998 -51.60 # #sblock10793 chromosome:7:31089764:31089859:-1 Same_strand|Exonic_non-coding|ENSRNOT00000053666|ENSRNOG00000035543 ## Same_strand|Boundary_non-coding|ENSRNOT00000053666|ENSRNOG00000035543 ## ENSRNOG00000035543|miRNA|rno-mir-331|rno-mir-331 [Source:miRBase;Acc:MI0000608] ## {MIR: rno-mir-331} #humanZ12p84 chromosome:12:94226322:94226435:1 Same_strand|Boundary_non-coding|ENST00000362302|ENSG00000199172|miRNA|hsa-mir-331 [Source:miRBase;Acc:MI0000812] ## {MIR: hsa-mir-331} #mouseZ26p84 chromosome:10:93426500:93426613:-1 Same_strand|Boundary_non-coding|ENSMUST00000092214|ENSMUSG00000036099|protein_coding|vezatin, adherens junctions transmembrane protein Gene [Source:MGI (curated);Acc:Vezt-001] ## Same_strand|Exonic_non-coding|ENSMUST00000119818|ENSMUSG00000036099|protein_coding|vezatin, adherens junctions transmembrane protein Gene [Source:MGI (curated);Acc:Vezt-001] ## {MIR: mmu-mir-331} ========== sblock10932 (miRBase rno-mir-30b) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock10932: 0.001 randfold humanZ15p84_sblock10932: 0.001 randfold mouseZ29p84_sblock10932: 0.001 #forester humanZ15p84_sblock10932: 0.822558 forester mouseZ29p84_sblock10932: 0.918986 #identity: 94.21 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT2S1 22 29 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT1S1 22 25 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT2S1 19 22 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT5S2 22 18 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT4S2 22 17 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT2S2 19 14 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT1S1 19 13 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT2S1 23 10 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT2S2 22 10 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT1S2 22 9 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT3S2 22 9 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT4S2 19 9 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT3S1 22 8 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT5S1 22 8 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT1S2 19 8 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT3S1 19 7 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT1S2 20 6 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT2S1 20 6 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT2S2 20 6 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT3S2 19 6 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT5S1 19 6 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT5S2 19 6 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT1S1 18 6 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT2S2 18 6 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT5S2 18 6 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT3S1 21 5 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT1S1 20 5 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT3S2 20 5 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT5S1 20 5 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT2S1 18 5 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT3S1 18 5 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT4S2 18 5 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT5S1 18 5 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT3S2 23 4 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libT4S1 22 4 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT3S1 20 4 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT2S2 23 3 sblock10932 TGGGATGTGGATGTTTACGTC #rat_gr1034133_libT5S1 21 3 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT1S1 21 3 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT2S1 21 3 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT4S2 20 3 sblock10932 CTGGGATGTGGATGTTTACG #rat_gr450469_libT5S2 20 3 sblock10932 CTGGGATGTGGATGTTTAC #rat_gr450468_libT4S1 19 3 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT3S2 18 3 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT1S1 23 2 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT1S2 23 2 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT3S1 23 2 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT5S2 23 2 sblock10932 TGGGATGTGGATGTTTACGTC #rat_gr1034133_libT1S1 21 2 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT2S2 21 2 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT4S2 21 2 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT5S2 21 2 sblock10932 GCTGGGATGTGGATGTTTACG #rat_gr574335_libT3S1 21 2 sblock10932 TGGGATGTGGATGTTTACGTCA #rat_gr1034134_libT1S1 22 1 sblock10932 TGGGATGTGGATGTTTACGTCA #rat_gr1034134_libT1S2 22 1 sblock10932 TGGGATGTGGATGTTTACGTCA #rat_gr1034134_libT2S2 22 1 sblock10932 TGGGATGTGGATGTTTACGTCA #rat_gr1034134_libT3S1 22 1 sblock10932 TGGGATGTGGATGTTTACGTCA #rat_gr1034134_libT5S1 22 1 sblock10932 TGGGATGTGGATGTTTACGTCA #rat_gr1034134_libT5S2 22 1 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT4S1 23 1 sblock10932 CTGGGATGTGGATGTTTACGTCA #rat_gr450472_libT5S1 23 1 sblock10932 GCTGGGATGTGGATGTTTACGTCA #rat_gr574336_libT1S1 24 1 sblock10932 TGGGATGTGGATGTTTACGTC #rat_gr1034133_libT1S2 21 1 sblock10932 TGGGATGTGGATGTTTACGTC #rat_gr1034133_libT2S1 21 1 sblock10932 TGGGATGTGGATGTTTACGTC #rat_gr1034133_libT4S2 21 1 sblock10932 CTGGGATGTGGATGTTTACGTC #rat_gr450471_libMirbase_rno-miR-30b-3p 22 1 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT1S2 21 1 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT3S2 21 1 sblock10932 CTGGGATGTGGATGTTTACGT #rat_gr450470_libT5S1 21 1 sblock10932 GGGATGTGGATGTTTACG #rat_gr605519_libT2S1 18 1 sblock10932 TGGGATGTGGATGTTTACG #rat_gr1034132_libT2S1 19 1 sblock10932 TGGGATGTGGATGTTTACG #rat_gr1034132_libT2S2 19 1 sblock10932 TGGGATGTGGATGTTTACG #rat_gr1034132_libT5S2 19 1 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT1S2 18 1 sblock10932 CTGGGATGTGGATGTTTA #rat_gr450467_libT4S1 18 1 sblock10932 GGCTGGGATGTGGATGTTTA #rat_gr600384_libT2S2 20 1 sblock10932 TGGCTGGGATGTGGATGTTTA #rat_gr1017934_libT5S1 21 1 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT5S2 18 13770 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT5S2 19 12588 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT5S2 22 11700 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT4S2 18 8468 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT1S1 18 7644 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT4S2 19 7642 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT5S1 18 7466 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT1S1 19 6965 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT3S1 22 6950 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT4S2 22 6931 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT5S1 19 6836 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT2S2 22 6561 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT3S2 22 6391 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT2S1 22 6339 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT1S1 22 6222 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT5S1 22 6145 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT4S1 18 5941 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT3S1 19 5731 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT4S1 19 5581 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT3S1 18 5204 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT3S2 19 5147 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT2S2 19 4648 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT3S2 18 4612 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT4S1 22 4549 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT1S2 18 4497 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT5S2 21 4302 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT1S2 19 4291 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libT1S2 22 4092 sblock10932 TGTAAACATCCTACACTCA #rat_gr1073473_libT2S1 19 3673 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT2S2 18 3184 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT5S2 20 3104 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT3S1 21 2403 sblock10932 TGTAAACATCCTACACTC #rat_gr1073472_libT2S1 18 2338 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT2S2 21 2229 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT3S2 21 2204 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT2S1 21 2075 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT2S2 20 2019 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT2S1 20 2008 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT5S1 21 1958 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT4S2 21 1955 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT1S1 21 1906 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT3S1 20 1839 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT5S1 20 1571 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT3S2 20 1531 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT4S1 21 1464 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT1S1 20 1421 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT4S2 20 1394 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT4S1 20 1168 sblock10932 TGTAAACATCCTACACTCAGC #rat_gr1073475_libT1S2 21 1110 sblock10932 TGTAAACATCCTACACTCAG #rat_gr1073474_libT1S2 20 866 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT5S2 18 282 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT5S2 21 205 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT4S2 18 155 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT1S1 18 133 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT5S1 18 131 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT2S1 21 125 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT3S2 18 119 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT3S1 18 116 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT1S1 21 115 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT2S2 21 113 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT5S1 21 111 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT4S2 21 105 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT3S2 21 102 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT4S1 18 91 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT3S1 21 87 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT2S1 18 86 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT4S1 21 84 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT1S2 18 82 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT5S2 20 75 sblock10932 GTAAACATCCTACACTCA #rat_gr626783_libT2S2 18 72 sblock10932 GTAAACATCCTACACTCAGCT #rat_gr626786_libT1S2 21 70 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT5S2 19 66 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT3S2 20 47 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT5S2 23 45 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT2S2 20 44 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT1S1 20 42 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT3S1 19 39 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT3S1 20 36 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT2S1 20 35 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT2S1 19 34 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT5S1 23 32 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT5S1 20 31 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT5S1 19 31 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT2S2 23 28 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT4S2 20 28 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT2S2 19 24 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT1S1 19 22 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT4S2 19 22 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT3S2 23 20 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT3S2 19 20 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT3S1 23 18 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT1S1 23 17 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT2S1 23 17 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT2S1 24 15 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT4S2 23 15 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT1S2 20 15 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT4S1 19 15 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT5S2 24 14 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT1S2 23 14 sblock10932 GTAAACATCCTACACTCAGC #rat_gr626785_libT4S1 20 14 sblock10932 GTAAACATCCTACACTCAG #rat_gr626784_libT1S2 19 12 sblock10932 TGTAAACATCCTACACTCAGCTG #rat_gr1073477_libT4S1 23 7 sblock10932 ATGTAAACATCCTACACTCA #rat_gr235827_libT1S1 20 4 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT2S1 25 3 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT1S1 24 3 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT5S1 24 3 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT3S2 18 3 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT4S1 19 3 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT4S2 19 3 sblock10932 TAAACATCCTACACTCAGCT #rat_gr694365_libT1S1 20 3 sblock10932 TAAACATCCTACACTCAGCT #rat_gr694365_libT2S2 20 3 sblock10932 ATGTAAACATCCTACACTCAG #rat_gr235828_libT5S2 21 3 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT1S1 25 2 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT2S2 25 2 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT3S1 24 2 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT4S1 24 2 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT4S2 24 2 sblock10932 GTAAACATCCTACACTCAGCTG #rat_gr626787_libT1S1 22 2 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT2S1 18 2 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT3S1 18 2 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT4S2 18 2 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT5S1 18 2 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT1S2 19 2 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT2S1 19 2 sblock10932 ATGTAAACATCCTACACTCAGCT #rat_gr235829_libT5S1 23 2 sblock10932 TAAACATCCTACACTCAG #rat_gr694363_libT3S1 18 2 sblock10932 ATGTAAACATCCTACACTCA #rat_gr235827_libT4S2 20 2 sblock10932 ATCCTACACTCAGCTGTC #rat_gr221101_libT2S2 18 1 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT1S2 25 1 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT3S1 25 1 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT4S2 25 1 sblock10932 TGTAAACATCCTACACTCAGCTGTC #rat_gr1073479_libT5S2 25 1 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT1S2 24 1 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT2S2 24 1 sblock10932 TGTAAACATCCTACACTCAGCTGT #rat_gr1073478_libT3S2 24 1 sblock10932 AAACATCCTACACTCAGCTG #rat_gr12168_libT1S2 20 1 sblock10932 AAACATCCTACACTCAGCTG #rat_gr12168_libT2S1 20 1 sblock10932 GTAAACATCCTACACTCAGCTG #rat_gr626787_libT1S2 22 1 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT1S1 18 1 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT1S2 18 1 sblock10932 AACATCCTACACTCAGCT #rat_gr28405_libT2S2 18 1 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT1S1 19 1 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT2S2 19 1 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT3S2 19 1 sblock10932 AAACATCCTACACTCAGCT #rat_gr12167_libT5S1 19 1 sblock10932 TAAACATCCTACACTCAGCT #rat_gr694365_libT3S2 20 1 sblock10932 TAAACATCCTACACTCAGCT #rat_gr694365_libT4S1 20 1 sblock10932 TGTAAACATCCTACACTCAGCT #rat_gr1073476_libMirbase_rno-miR-30b-5p 22 1 sblock10932 ATGTAAACATCCTACACTCAGCT #rat_gr235829_libT2S1 23 1 sblock10932 AAACATCCTACACTCAGC #rat_gr12166_libT2S2 18 1 sblock10932 AAACATCCTACACTCAGC #rat_gr12166_libT3S1 18 1 sblock10932 AAACATCCTACACTCAGC #rat_gr12166_libT4S2 18 1 sblock10932 TAAACATCCTACACTCAGC #rat_gr694364_libT1S1 19 1 sblock10932 TAAACATCCTACACTCAG #rat_gr694363_libT5S2 18 1 sblock10932 ATGTAAACATCCTACACTCAG #rat_gr235828_libT3S1 21 1 sblock10932 ATGTAAACATCCTACACTC #rat_gr235826_libT2S1 19 1 sblock10932 ATGTAAACATCCTACACTC #rat_gr235826_libT4S1 19 1 sblock10932 ATGTAAACATCCTACACTC #rat_gr235826_libT4S2 19 1 sblock10932 ATGTAAACATCCTACACTC #rat_gr235826_libT5S1 19 1 sblock10932 ----CCGAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTCATACATGAGTTGGCTGGGATGTGGATGTTTACGTCAGCTGTCTTGGA--- humanZ15p84 ----CCAAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTAATACATGGATTGGCTGGGAGGTGGATGTTTACTTCAGCTGACTTGG---- mouseZ29p84 TAAGCCAAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTCATACATGCGTTGGCTGGGATGTGGATGTTTACGTCAGCTGTCTTGGAGTA ** ************************************ ******* ********** ************ ******* ***** sblock10932 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053698 ENSRNOG00000035575 rno-mir-30b sblock10932 (((((...(((((.((((((((((((.((((((((((((((....)))..)))))))).))))))))))))))).))))).))))). 1.000 -42.10 # humanZ15p84 (((((..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))))))) 1.000 -36.00 # mouseZ29p84 ....(((((...(((((.((((((((((((.(((((((((((............)))))))).))))))))))))))).))))).))))).... 1.000 -41.60 # #sblock10932 chromosome:7:105815917:105816003:-1 Same_strand|Exonic_non-coding|ENSRNOT00000053698|ENSRNOG00000035575 ## ENSRNOG00000035575|miRNA|rno-mir-30b|rno-mir-30b [Source:miRBase;Acc:MI0000868] ## {MIR: rno-mir-30b} #humanZ15p84 chromosome:8:135881946:135882031:-1 Same_strand|Exonic_non-coding|ENST00000384850|ENSG00000207582|miRNA|hsa-mir-30b [Source:miRBase;Acc:MI0000441] ## {MIR: hsa-mir-30b} #mouseZ29p84 chromosome:15:68168978:68169071:-1 Same_strand|Exonic_non-coding|ENSMUST00000083542|ENSMUSG00000065476|miRNA|mmu-mir-30b [Source:miRBase;Acc:MI0000145] ## {MIR: mmu-mir-30b} ========== sblock10933 (miRBase rno-mir-30d) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock10933: 0.002 randfold humanZ17p84_sblock10933: 0.001 randfold mouseZ31p84_sblock10933: 0.005 #forester humanZ17p84_sblock10933: 0.926026 forester mouseZ31p84_sblock10933: 1 #identity: 98.02 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT2S1 19 9 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT1S1 19 8 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT3S1 19 8 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT2S1 18 8 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT3S1 18 6 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT3S2 20 5 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT4S2 19 5 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT1S1 18 5 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT4S2 18 5 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT1S1 20 4 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT5S1 19 4 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT5S2 19 4 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT3S2 19 3 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT5S2 18 3 sblock10933 CTTTCAGTCAGATGTTTGCTG #rat_gr470179_libT1S1 21 2 sblock10933 CTTTCAGTCAGATGTTTGCTG #rat_gr470179_libT2S1 21 2 sblock10933 TTTCAGTCAGATGTTTGCT #rat_gr1158435_libT5S2 19 2 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT1S2 20 2 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT5S1 20 2 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT5S2 20 2 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT3S2 18 2 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT4S1 18 2 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT5S1 18 2 sblock10933 TTTCAGTCAGATGTTTGCTGCT #rat_gr1158436_libT3S1 22 1 sblock10933 CTTTCAGTCAGATGTTTGCTGCT #rat_gr470181_libT2S1 23 1 sblock10933 CTTTCAGTCAGATGTTTGCTGC #rat_gr470180_libMirbase_rno-miR-30d* 22 1 sblock10933 CTTTCAGTCAGATGTTTGCTG #rat_gr470179_libT3S1 21 1 sblock10933 CTTTCAGTCAGATGTTTGCTG #rat_gr470179_libT5S1 21 1 sblock10933 CTTTCAGTCAGATGTTTGCTG #rat_gr470179_libT5S2 21 1 sblock10933 TTTCAGTCAGATGTTTGCT #rat_gr1158435_libT2S2 19 1 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT2S2 20 1 sblock10933 CTTTCAGTCAGATGTTTGCT #rat_gr470178_libT3S1 20 1 sblock10933 TTTCAGTCAGATGTTTGC #rat_gr1158434_libT2S1 18 1 sblock10933 TTTCAGTCAGATGTTTGC #rat_gr1158434_libT3S2 18 1 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT1S2 19 1 sblock10933 CTTTCAGTCAGATGTTTGC #rat_gr470177_libT4S1 19 1 sblock10933 CTTTCAGTCAGATGTTTG #rat_gr470176_libT1S2 18 1 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT4S2 23 6146 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT4S2 18 5216 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT4S2 24 5001 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT4S2 20 4673 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT5S2 23 4585 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT1S1 18 4553 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT1S1 24 4323 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT5S1 23 4268 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT5S2 20 4263 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT1S1 20 4083 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT4S1 23 3917 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT4S2 21 3841 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT5S1 24 3758 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT5S2 18 3616 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT5S2 21 3571 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT5S1 18 3537 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT4S1 18 3447 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT4S1 24 3444 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT1S1 21 3324 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT1S1 23 3231 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT5S2 24 3219 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT1S2 24 3121 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT4S1 20 3076 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT5S1 20 3038 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT5S1 21 3028 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT2S1 24 2961 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT1S2 23 2921 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT1S1 19 2808 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT1S2 18 2767 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT2S2 24 2676 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT2S2 18 2659 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT4S2 19 2635 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT2S2 23 2622 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT5S2 19 2564 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT4S1 21 2412 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT1S2 20 2298 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT1S2 21 2277 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT3S1 19 2185 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT3S2 18 2137 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT2S1 18 2090 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT2S1 23 2082 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT3S2 23 2070 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT2S2 20 2024 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT2S1 20 2013 sblock10933 TGTAAACATCCCCGACTG #rat_gr1073390_libT3S1 18 1980 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT3S2 20 1967 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT3S2 24 1830 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT3S2 21 1816 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT5S1 19 1599 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT2S2 21 1589 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT1S2 19 1579 sblock10933 TGTAAACATCCCCGACTGGA #rat_gr1073392_libT3S1 20 1518 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT4S1 19 1513 sblock10933 TGTAAACATCCCCGACTGGAAGCT #rat_gr1073396_libT3S1 24 1501 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT2S1 19 1494 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT2S1 21 1306 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT3S2 19 1159 sblock10933 TGTAAACATCCCCGACTGG #rat_gr1073391_libT2S2 19 1067 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT4S2 22 884 sblock10933 TGTAAACATCCCCGACTGGAAGC #rat_gr1073395_libT3S1 23 879 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT5S2 22 813 sblock10933 TGTAAACATCCCCGACTGGAA #rat_gr1073393_libT3S1 21 783 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT1S1 22 716 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT5S1 22 694 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT4S1 22 560 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT2S1 22 484 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT1S2 22 438 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT2S2 22 411 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT3S2 22 318 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libT3S1 22 231 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT4S2 22 112 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT4S2 23 107 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT1S1 23 96 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT1S1 19 79 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT5S2 22 77 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT4S1 22 71 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT4S2 19 71 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT1S1 20 69 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT1S2 23 65 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT4S1 23 65 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT1S1 22 64 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT5S2 19 64 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT5S1 23 63 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT5S2 23 63 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT2S1 23 60 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT5S1 22 57 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT1S2 22 54 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT2S2 23 53 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT2S2 22 52 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT5S2 20 50 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT4S1 20 48 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT1S1 18 47 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT3S1 23 43 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT4S2 20 43 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT3S2 20 42 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT4S1 19 42 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT3S2 22 41 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT5S1 20 41 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT2S2 19 37 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT3S1 18 37 sblock10933 GTAAACATCCCCGACTGGAAGCT #rat_gr626767_libT3S2 23 36 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT5S1 19 36 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT4S2 18 36 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT2S1 18 35 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT5S2 18 35 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT2S1 22 34 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT1S2 19 33 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT1S2 20 31 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT2S2 20 31 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT5S1 18 30 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT3S2 19 29 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT2S1 19 27 sblock10933 GTAAACATCCCCGACTGGA #rat_gr626763_libT3S1 19 26 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT1S2 18 25 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT2S2 18 21 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT2S1 20 19 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT4S1 18 19 sblock10933 GTAAACATCCCCGACTGGAA #rat_gr626764_libT3S1 20 18 sblock10933 GTAAACATCCCCGACTGGAAGC #rat_gr626766_libT3S1 22 16 sblock10933 GTAAACATCCCCGACTGG #rat_gr626762_libT3S2 18 16 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT5S2 21 15 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT4S2 25 14 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT1S1 21 11 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT2S1 21 10 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT4S2 21 10 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT1S2 21 9 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT2S2 21 9 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT3S1 21 8 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT5S1 21 7 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT3S2 21 6 sblock10933 TGTAAACATCCCCGACTGGAAGCTGT #rat_gr1073398_libT5S1 26 5 sblock10933 GTAAACATCCCCGACTGGAAG #rat_gr626765_libT4S1 21 5 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT5S1 25 4 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT1S1 25 3 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT2S1 25 3 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT4S2 19 3 sblock10933 TGTAAACATCCCCGACTGGAAGCTGT #rat_gr1073398_libT4S2 26 2 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT1S2 25 2 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT3S1 25 2 sblock10933 ACATCCCCGACTGGAAGCT #rat_gr83756_libT4S1 19 2 sblock10933 ACATCCCCGACTGGAAGCT #rat_gr83756_libT4S2 19 2 sblock10933 AAACATCCCCGACTGGAAGCT #rat_gr12152_libT4S1 21 2 sblock10933 ACATCCCCGACTGGAAGC #rat_gr83755_libT2S1 18 2 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT2S2 19 2 sblock10933 AAACATCCCCGACTGGAAGC #rat_gr12151_libT4S2 20 2 sblock10933 TAAACATCCCCGACTGGAAGC #rat_gr694360_libT1S1 21 2 sblock10933 TAAACATCCCCGACTGGA #rat_gr694357_libT4S2 18 2 sblock10933 GTAAACATCCCCGACTGGAAGCTGT #rat_gr626769_libT4S2 25 1 sblock10933 TGTAAACATCCCCGACTGGAAGCTGT #rat_gr1073398_libT1S1 26 1 sblock10933 TGTAAACATCCCCGACTGGAAGCTGT #rat_gr1073398_libT2S1 26 1 sblock10933 TGTAAACATCCCCGACTGGAAGCTGT #rat_gr1073398_libT4S1 26 1 sblock10933 TGTAAACATCCCCGACTGGAAGCTGT #rat_gr1073398_libT5S2 26 1 sblock10933 GTAAACATCCCCGACTGGAAGCTG #rat_gr626768_libT5S2 24 1 sblock10933 TGTAAACATCCCCGACTGGAAGCTG #rat_gr1073397_libT4S1 25 1 sblock10933 ACATCCCCGACTGGAAGCT #rat_gr83756_libT1S1 19 1 sblock10933 AAACATCCCCGACTGGAAGCT #rat_gr12152_libT4S2 21 1 sblock10933 TAAACATCCCCGACTGGAAGCT #rat_gr694361_libT1S2 22 1 sblock10933 TAAACATCCCCGACTGGAAGCT #rat_gr694361_libT2S1 22 1 sblock10933 TAAACATCCCCGACTGGAAGCT #rat_gr694361_libT4S2 22 1 sblock10933 TAAACATCCCCGACTGGAAGCT #rat_gr694361_libT5S2 22 1 sblock10933 ACATCCCCGACTGGAAGC #rat_gr83755_libT1S1 18 1 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT1S1 19 1 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT1S2 19 1 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT3S1 19 1 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT5S1 19 1 sblock10933 AACATCCCCGACTGGAAGC #rat_gr28386_libT5S2 19 1 sblock10933 AAACATCCCCGACTGGAAGC #rat_gr12151_libT2S2 20 1 sblock10933 TAAACATCCCCGACTGGAAGC #rat_gr694360_libT5S2 21 1 sblock10933 CTGTAAACATCCCCGACTGGAAGC #rat_gr453098_libT5S1 24 1 sblock10933 AACATCCCCGACTGGAAG #rat_gr28385_libT1S1 18 1 sblock10933 AAACATCCCCGACTGGAAG #rat_gr12150_libT4S1 19 1 sblock10933 AAACATCCCCGACTGGAAG #rat_gr12150_libT4S2 19 1 sblock10933 TAAACATCCCCGACTGGAAG #rat_gr694359_libT5S1 20 1 sblock10933 TGTAAACATCCCCGACTGGAAG #rat_gr1073394_libMirbase_rno-miR-30d 22 1 sblock10933 CTGTAAACATCCCCGACTGGAAG #rat_gr453097_libT4S2 23 1 sblock10933 AAACATCCCCGACTGGAA #rat_gr12149_libT1S2 18 1 sblock10933 TAAACATCCCCGACTGGAA #rat_gr694358_libT1S1 19 1 sblock10933 CTGTAAACATCCCCGACT #rat_gr453096_libT2S2 18 1 sblock10933 --------------------AAGTCTGTGTCTGTAAACATCCCCGACTGGAAGCTGTAAGCCACAGCCAAGCTTTCAGTCAGATGTTTGCTGCTACTGGCTC------------------ humanZ17p84 -------------------------------TGTAAACATCCCCGACTGGAAGCTGTAAGACACAGCTAAGCTTTCAGTCAGATGTTTGCT----------------------------- mouseZ31p84 CTTTGTAGCTTGCTGTCAGAAAGTCTGTGTCTGTAAACATCCCCGACTGGAAGCTGTAAGCCACAGCCAAGCTTTCAGTCAGATGTTTGCTGCTACTGGCTCTTCGAATGCATCTTTTGG ***************************** ****** *********************** sblock10933 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053734 ENSRNOG00000035611 rno-mir-30d sblock10933 .((((.(((.(.(((((((((...(((((((((((....((....))..))))))))))).))))))))).).))).)))). 1.000 -34.00 # humanZ17p84 .(((((((((...(((((((((((...((......)).))))))))))).))))))))). 1.000 -26.70 # mouseZ31p84 ..........(((..((.(((((((.(((...(((((((((...(((((((((((....((....))..))))))))))).)))))))))...))).)))).)))))..)))........ 0.943 -39.00 # #sblock10933 chromosome:7:105819720:105819801:-1 Same_strand|Exonic_non-coding|ENSRNOT00000053734|ENSRNOG00000035611 ## ENSRNOG00000035611|miRNA|rno-mir-30d|rno-mir-30d [Source:miRBase;Acc:MI0000869] ## {MIR: rno-mir-30d} #humanZ17p84 chromosome:8:135886275:135886396:-1 Same_strand|Boundary_non-coding|ENST00000362283|ENSG00000199153|miRNA|hsa-mir-30d [Source:miRBase;Acc:MI0000255] ## {MIR: hsa-mir-30d} #mouseZ31p84 chromosome:15:68172752:68172871:-1 Same_strand|Boundary_non-coding|ENSMUST00000083503|ENSMUSG00000065437|miRNA|mmu-mir-30d [Source:miRBase;Acc:MI0000549] ## {MIR: mmu-mir-30d} ========== sblock11469 (miRBase rno-let-7c-2) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock11469: 0.001 randfold humanZ31p84_sblock11469: 0.001 randfold mouse109p84_sblock11469: 0.001 #forester humanZ31p84_sblock11469: 0.724901 forester mouse109p84_sblock11469: 0.542784 #identity: 81.66 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT5S2 22 5115 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT1S1 22 4870 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT1S1 19 4131 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT1S2 22 3268 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT1S1 18 2887 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT5S2 19 2841 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT5S1 22 2382 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT1S2 19 2204 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT1S1 20 1922 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT1S1 21 1836 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT4S2 22 1512 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT1S2 18 1458 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT5S2 18 1446 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT5S1 19 1409 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT4S2 19 1386 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT5S2 21 1346 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT3S2 22 1344 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT5S2 20 1263 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT4S2 18 1181 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT3S1 18 1136 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT3S1 19 1104 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT3S1 22 1055 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT1S2 20 1033 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT1S2 21 1026 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT3S2 18 976 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT5S1 18 921 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT3S2 19 919 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT2S2 18 882 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT2S1 22 737 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT2S2 22 732 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT2S2 19 715 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libT4S1 22 714 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT4S1 18 677 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT4S1 19 677 sblock11469 TGAGGTAGTAGGTTGTAT #rat_gr949684_libT2S1 18 666 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT5S1 21 576 sblock11469 TGAGGTAGTAGGTTGTATG #rat_gr949694_libT2S1 19 575 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT4S2 20 540 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT5S1 20 487 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT4S2 21 433 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT3S2 20 336 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT5S2 23 335 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT3S1 20 329 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT3S2 21 294 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT3S1 21 289 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT2S2 20 277 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT4S1 20 258 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT4S1 21 256 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT1S1 23 246 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT5S1 23 206 sblock11469 TGAGGTAGTAGGTTGTATGG #rat_gr949695_libT2S1 20 197 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT2S1 21 184 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT1S2 23 182 sblock11469 TGAGGTAGTAGGTTGTATGGT #rat_gr949696_libT2S2 21 160 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT4S2 23 116 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT3S2 23 100 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT5S2 21 89 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT2S2 23 87 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT3S1 23 62 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT4S1 23 59 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT1S1 20 45 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT1S1 21 41 sblock11469 TGAGGTAGTAGGTTGTATGGTTT #rat_gr949698_libT2S1 23 39 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT1S1 19 39 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT5S2 18 38 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT5S2 20 36 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT1S1 24 34 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT1S1 18 33 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT1S2 21 33 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT5S2 19 32 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT5S2 24 31 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT5S1 21 25 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT1S2 24 23 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT1S2 18 22 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT1S2 20 20 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT1S2 19 18 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT4S2 18 17 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT3S2 21 17 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT3S1 20 16 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT4S2 24 15 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT5S1 18 15 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT5S1 24 14 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT2S1 18 14 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT2S2 18 14 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT4S2 19 14 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT2S1 24 13 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT3S2 18 13 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT4S2 20 13 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT4S2 21 13 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT2S2 24 11 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTG #rat_gr949701_libT5S2 25 11 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT3S1 18 11 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT3S2 20 11 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT4S1 21 11 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT3S1 24 10 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT5S1 20 9 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT4S1 24 8 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT3S1 19 8 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT5S1 19 8 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT4S1 20 8 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT2S1 19 7 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT2S2 21 7 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT3S2 19 6 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT4S1 19 6 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT5S2 22 6 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT2S2 20 5 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT2S1 21 5 sblock11469 TGAGGTAGTAGGTTGTATGGTTTT #rat_gr949700_libT3S2 24 4 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTG #rat_gr949701_libT1S1 25 4 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTG #rat_gr949701_libT5S1 25 4 sblock11469 GAGGTAGTAGGTTGTATG #rat_gr514540_libT4S1 18 4 sblock11469 GAGGTAGTAGGTTGTATGGT #rat_gr514542_libT2S1 20 4 sblock11469 GAGGTAGTAGGTTGTATGGTT #rat_gr514543_libT3S1 21 4 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT4S2 22 4 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTGG #rat_gr949702_libT5S2 26 3 sblock11469 GAGGTAGTAGGTTGTATGG #rat_gr514541_libT2S2 19 3 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT1S2 22 3 sblock11469 GAGGTAGTAGGTTGTATGGTTTT #rat_gr514546_libT5S2 23 3 sblock11469 GTAGTAGGTTGTATGGTT #rat_gr630586_libT1S2 18 3 sblock11469 GTGAGGTAGTAGGTTGTAT #rat_gr645042_libT2S1 19 2 sblock11469 GTGAGGTAGTAGGTTGTAT #rat_gr645042_libT5S2 19 2 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTG #rat_gr949701_libT3S1 25 2 sblock11469 AGGTAGTAGGTTGTATGGT #rat_gr190472_libT1S1 19 2 sblock11469 AGGTAGTAGGTTGTATGGT #rat_gr190472_libT3S1 19 2 sblock11469 AGGTAGTAGGTTGTATGGTT #rat_gr190473_libT1S1 20 2 sblock11469 GGGGTGAGGTAGTAGGTTGT #rat_gr613750_libT5S2 20 1 sblock11469 GGGTGAGGTAGTAGGTTGT #rat_gr615362_libT2S1 19 1 sblock11469 GTGAGGTAGTAGGTTGTA #rat_gr645041_libT5S1 18 1 sblock11469 GTGAGGTAGTAGGTTGTA #rat_gr645041_libT5S2 18 1 sblock11469 GTGAGGTAGTAGGTTGTAT #rat_gr645042_libT1S2 19 1 sblock11469 GTGAGGTAGTAGGTTGTAT #rat_gr645042_libT4S2 19 1 sblock11469 GTGAGGTAGTAGGTTGTATGG #rat_gr645043_libT5S2 21 1 sblock11469 GTGAGGTAGTAGGTTGTATGGT #rat_gr645044_libT5S1 22 1 sblock11469 GTGAGGTAGTAGGTTGTATGGTT #rat_gr645045_libT1S1 23 1 sblock11469 GTGAGGTAGTAGGTTGTATGGTT #rat_gr645045_libT5S2 23 1 sblock11469 TGAGGTAGTAGGTTGTATGGTT #rat_gr949697_libMirbase_rno-let-7c 22 1 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTG #rat_gr949701_libT2S1 25 1 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTG #rat_gr949701_libT2S2 25 1 sblock11469 TGAGGTAGTAGGTTGTATGGTTTTGG #rat_gr949702_libT1S1 26 1 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT1S1 22 1 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT2S1 22 1 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT2S2 22 1 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT3S2 22 1 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT4S1 22 1 sblock11469 GAGGTAGTAGGTTGTATGGTTT #rat_gr514544_libT5S1 22 1 sblock11469 GAGGTAGTAGGTTGTATGGTTTT #rat_gr514546_libT4S1 23 1 sblock11469 GAGGTAGTAGGTTGTATGGTTTTG #rat_gr514547_libT3S1 24 1 sblock11469 GAGGTAGTAGGTTGTATGGTTTTG #rat_gr514547_libT5S2 24 1 sblock11469 AGGTAGTAGGTTGTATGG #rat_gr190471_libT3S1 18 1 sblock11469 AGGTAGTAGGTTGTATGGT #rat_gr190472_libT1S2 19 1 sblock11469 AGGTAGTAGGTTGTATGGT #rat_gr190472_libT2S1 19 1 sblock11469 AGGTAGTAGGTTGTATGGT #rat_gr190472_libT4S2 19 1 sblock11469 AGGTAGTAGGTTGTATGGT #rat_gr190472_libT5S2 19 1 sblock11469 AGGTAGTAGGTTGTATGGTT #rat_gr190473_libT1S2 20 1 sblock11469 AGGTAGTAGGTTGTATGGTT #rat_gr190473_libT4S2 20 1 sblock11469 AGGTAGTAGGTTGTATGGTT #rat_gr190473_libT5S2 20 1 sblock11469 GGTAGTAGGTTGTATGGT #rat_gr618544_libT1S2 18 1 sblock11469 GGTAGTAGGTTGTATGGT #rat_gr618544_libT3S1 18 1 sblock11469 GGTAGTAGGTTGTATGGT #rat_gr618544_libT4S2 18 1 sblock11469 GGTAGTAGGTTGTATGGT #rat_gr618544_libT5S2 18 1 sblock11469 GTAGTAGGTTGTATGGTT #rat_gr630586_libT2S1 18 1 sblock11469 GTAGTAGGTTGTATGGTT #rat_gr630586_libT3S1 18 1 sblock11469 GTAGTAGGTTGTATGGTTT #rat_gr630587_libT2S1 19 1 sblock11469 GTAGTAGGTTGTATGGTTT #rat_gr630587_libT4S2 19 1 sblock11469 TTGGG-------CTCTGCCCCGCTCTG #rat_gr1144560_libT4S1 20 1 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT1S1 22 625 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT1S2 22 432 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT1S1 21 353 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT5S1 22 285 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT2S2 21 232 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT3S1 21 202 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT1S1 18 193 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT4S2 21 191 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT1S1 19 185 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT1S2 21 177 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT3S1 22 168 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT2S1 21 156 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT4S2 22 143 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT2S2 22 142 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT1S2 18 135 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT2S1 22 135 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT1S2 19 123 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT4S1 21 116 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT5S1 21 116 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT2S2 18 99 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT5S2 22 95 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT3S1 18 90 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT4S1 22 85 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT5S1 18 83 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT3S1 19 80 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT2S2 19 79 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT3S2 21 79 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT4S2 19 73 sblock11469 CTATACAATCTACTGTCTTTC #rat_gr414404_libT5S2 21 69 sblock11469 CTATACAATCTACTGTCTTTCC #rat_gr414405_libT3S2 22 64 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT2S1 18 63 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT5S2 18 62 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT4S2 18 60 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT5S1 19 58 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT4S1 19 54 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT3S2 18 50 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT5S2 19 47 sblock11469 CTATACAATCTACTGTCT #rat_gr414401_libT4S1 18 46 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT2S1 19 45 sblock11469 CTATACAATCTACTGTCTT #rat_gr414402_libT3S2 19 41 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT1S1 20 19 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT3S2 20 12 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT3S1 20 9 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT1S2 20 7 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT5S1 20 7 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT1S2 23 7 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT1S1 23 6 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT2S2 20 3 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT4S1 20 3 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT4S2 20 3 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT5S2 20 3 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT2S2 23 3 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT3S1 23 3 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT3S2 23 3 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT5S1 23 3 sblock11469 ATACAATCTACTGTCTTTCC #rat_gr206639_libT2S1 20 3 sblock11469 ATACAATCTACTGTCTTTCC #rat_gr206639_libT3S1 20 3 sblock11469 CTATACAATCTACTGTCTTT #rat_gr414403_libT2S1 20 2 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT5S2 23 2 sblock11469 CTATACAATCTACTGTCTTTCCTG #rat_gr414407_libT3S2 24 2 sblock11469 CTATACAATCTACTGTCTTTCCTG #rat_gr414407_libT5S2 24 2 sblock11469 ATACAATCTACTGTCTTTCC #rat_gr206639_libT1S1 20 2 sblock11469 GGTAACTATACAATCTAC #rat_gr617772_libT5S2 18 1 sblock11469 AACTATACAATCTACTGTCT #rat_gr37477_libT4S2 20 1 sblock11469 ACTATACAATCTACTGTCTTTCC #rat_gr115976_libT1S1 23 1 sblock11469 CTATACAATCTACTGTCTTTCCT #rat_gr414406_libT4S2 23 1 sblock11469 CTATACAATCTACTGTCTTTCCTG #rat_gr414407_libT5S1 24 1 sblock11469 TATACAATCTACTGTCTT #rat_gr791088_libT4S2 18 1 sblock11469 TATACAATCTACTGTCTTTC #rat_gr791089_libT3S1 20 1 sblock11469 TATACAATCTACTGTCTTTCC #rat_gr791090_libT1S1 21 1 sblock11469 TATACAATCTACTGTCTTTCC #rat_gr791090_libT1S2 21 1 sblock11469 TATACAATCTACTGTCTTTCC #rat_gr791090_libT4S1 21 1 sblock11469 ATACAATCTACTGTCTTTCC #rat_gr206639_libT3S2 20 1 sblock11469 ATACAATCTACTGTCTTTCC #rat_gr206639_libT5S1 20 1 sblock11469 -------------------ACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTTTTGGG-------CTCTGCCCCGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGCCGC-------------- humanZ31p84 CCATCGGCACCAAGACCGACTGCCCTTTGGGGTGAGGTAGTAGGTTGTATAGTTTGGGG-------CTCTGCCCTGCTATGGGATAACTATACAATCTACTGTCTTTCCTGAAGTGGCTGTAATATCTGCGGTGG mouse109p84 --------------------------------TGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCTCCG-AAGATAACTATACAACCTACTGCCTTC---------------------------- **************** * **** ** ***** * * *********** ****** *** sblock11469 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053584 ENSRNOG00000035461 rno-let-7c-2 sblock11469 .((((((((.(((.(((..((((((((((((((((..((( (...))))(((...)))..))))))))))))))))..))).))).))).))))). 1.000 -48.70 # humanZ31p84 .......((((.(((...((.((((((..(((.(((..((((((((((((((((((((( (...)))))).........))))))))))))))))..))))))..))).))).))....)))..)))). 0.900 -55.80 # mouse109p84 .(((((((((((((((((((((((.((((((.....))))))....) ))....)))))))))))))))))))). 0.866 -39.00 # #sblock11469 chromosome:7:123700790:123700884:1 Same_strand|Exonic_non-coding|ENSRNOT00000053584|ENSRNOG00000035461 ## ENSRNOG00000035461|miRNA|rno-let-7c-2|rno-let-7c-2 [Source:miRBase;Acc:MI0000831] ## {MIR: rno-let-7c-2} #humanZ31p84 chromosome:22:44887264:44887391:1 Same_strand|Boundary_non-coding|ENST00000362116|ENSG00000198986|miRNA|hsa-let-7a-3 [Source:miRBase;Acc:MI0000062] ## {MIR: hsa-let-7a-3} #mouse109p84 chromosome:15:85537722:85537856:1 Same_strand|Boundary_non-coding|ENSMUST00000083630|ENSMUSG00000065564|miRNA|mmu-let-7b [Source:miRBase;Acc:MI0000558] ## {MIR: mmu-let-7b} ========== sblock11470 (miRBase rno-let-7b) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock11470: 0.001 randfold human101p84_sblock11470: 0.001 randfold mouseZ45p84_sblock11470: 0.001 #forester human101p84_sblock11470: 0.546112 forester mouseZ45p84_sblock11470: 0.723178 #identity: 88.48 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT5S2 22 5675 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT1S1 22 4173 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT1S1 18 3587 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT5S1 22 3578 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT5S2 19 3154 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT1S1 19 3042 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT1S2 22 2726 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT5S2 18 2705 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT1S2 18 2159 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT1S1 20 2109 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT5S2 20 2084 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT5S2 21 2072 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT3S1 22 2019 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT3S1 18 1908 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT1S2 19 1819 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT1S1 21 1753 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT5S1 18 1719 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT5S1 19 1715 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT3S1 19 1519 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT4S2 18 1451 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT3S2 22 1404 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT3S2 18 1355 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT4S2 19 1233 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT2S2 18 1215 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT4S2 22 1208 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT1S2 20 1191 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT5S1 21 1136 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT3S2 19 1084 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT1S2 21 988 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT5S2 24 958 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT2S2 22 939 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT5S1 20 922 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT2S1 18 827 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT4S1 22 781 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libT2S1 22 759 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT4S1 19 655 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT4S2 20 614 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT3S1 20 603 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT3S1 21 582 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT2S2 19 581 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT5S2 23 528 sblock11470 TGAGGTAGTAGGTTGTGT #rat_gr949703_libT4S1 18 523 sblock11470 TGAGGTAGTAGGTTGTGTG #rat_gr949704_libT2S1 19 496 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT3S2 20 489 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT3S2 21 452 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT1S1 24 434 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT2S2 20 364 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT4S2 21 361 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT5S1 23 354 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT5S1 24 329 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT1S1 23 313 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT2S2 21 298 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT2S1 20 280 sblock11470 TGAGGTAGTAGGTTGTGTGG #rat_gr949705_libT4S1 20 275 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT4S1 21 244 sblock11470 TGAGGTAGTAGGTTGTGTGGT #rat_gr949706_libT2S1 21 242 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT1S2 24 228 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT3S2 24 200 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT3S1 24 182 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT1S2 23 160 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT4S2 24 158 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT4S2 23 156 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT3S1 23 140 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT4S1 23 127 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT2S2 23 124 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT3S2 23 121 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT2S2 24 119 sblock11470 TGAGGTAGTAGGTTGTGTGGTTT #rat_gr949708_libT2S1 23 89 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT4S1 24 71 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTC #rat_gr949709_libT2S1 24 49 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT5S2 21 44 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT1S1 18 40 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT5S2 20 40 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT1S1 19 33 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT1S1 20 29 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT5S2 19 27 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT1S1 21 27 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT5S1 18 25 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT5S1 21 22 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT5S2 18 20 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT1S2 21 20 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT5S1 20 19 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT5S1 19 15 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT3S1 21 12 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT1S2 19 11 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT3S1 19 11 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT5S2 23 11 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT1S2 18 10 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT1S2 20 10 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT2S2 20 10 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT3S2 21 10 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT2S2 18 9 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT3S1 18 9 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT3S2 20 7 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT4S1 20 7 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT4S2 20 7 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT4S2 18 6 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT2S1 19 6 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT3S2 19 6 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT4S1 19 6 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT2S2 21 6 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT4S2 21 6 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT3S2 18 5 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT4S2 19 5 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT4S1 21 5 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT1S1 23 5 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCA #rat_gr949710_libT5S2 25 4 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT4S1 18 4 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT3S1 20 4 sblock11470 GAGGTAGTAGGTTGTGTGGTTT #rat_gr514552_libT5S2 22 4 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT3S2 23 4 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCA #rat_gr949710_libT1S2 25 3 sblock11470 GAGGTAGTAGGTTGTGTGG #rat_gr514549_libT2S2 19 3 sblock11470 GAGGTAGTAGGTTGTGTGGTT #rat_gr514551_libT2S1 21 3 sblock11470 GAGGTAGTAGGTTGTGTGGTTT #rat_gr514552_libT1S2 22 3 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT1S2 23 3 sblock11470 GTAGTAGGTTGTGTGGTT #rat_gr630589_libT5S1 18 3 sblock11470 CGGGGTGAGGTAGTAGGTTG #rat_gr401879_libT3S2 20 2 sblock11470 CGGGGTGAGGTAGTAGGTTGT #rat_gr401880_libT3S2 21 2 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCA #rat_gr949710_libT1S1 25 2 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCA #rat_gr949710_libT5S1 25 2 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT3S1 23 2 sblock11470 GTAGTAGGTTGTGTGGTT #rat_gr630589_libT5S2 18 2 sblock11470 GGGGTGAGGTAGTAGGTTGT #rat_gr613750_libT5S2 20 1 sblock11470 GGGTGAGGTAGTAGGTTGT #rat_gr615362_libT2S1 19 1 sblock11470 GTGAGGTAGTAGGTTGTG #rat_gr645046_libT1S1 18 1 sblock11470 GTGAGGTAGTAGGTTGTG #rat_gr645046_libT5S2 18 1 sblock11470 GTGAGGTAGTAGGTTGTGT #rat_gr645047_libT2S1 19 1 sblock11470 GTGAGGTAGTAGGTTGTGT #rat_gr645047_libT3S2 19 1 sblock11470 GTGAGGTAGTAGGTTGTGT #rat_gr645047_libT5S2 19 1 sblock11470 GTGAGGTAGTAGGTTGTGTGGTT #rat_gr645048_libT3S1 23 1 sblock11470 TGAGGTAGTAGGTTGTGTGGTT #rat_gr949707_libMirbase_rno-let-7b 22 1 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCA #rat_gr949710_libT3S1 25 1 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCA #rat_gr949710_libT4S1 25 1 sblock11470 TGAGGTAGTAGGTTGTGTGGTTTCAG #rat_gr949711_libT3S2 26 1 sblock11470 GAGGTAGTAGGTTGTGTG #rat_gr514548_libT2S1 18 1 sblock11470 GAGGTAGTAGGTTGTGTGGT #rat_gr514550_libT2S1 20 1 sblock11470 GAGGTAGTAGGTTGTGTGGTTT #rat_gr514552_libT1S1 22 1 sblock11470 GAGGTAGTAGGTTGTGTGGTTT #rat_gr514552_libT2S1 22 1 sblock11470 GAGGTAGTAGGTTGTGTGGTTT #rat_gr514552_libT2S2 22 1 sblock11470 GAGGTAGTAGGTTGTGTGGTTT #rat_gr514552_libT4S2 22 1 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT4S2 23 1 sblock11470 GAGGTAGTAGGTTGTGTGGTTTC #rat_gr514553_libT5S1 23 1 sblock11470 AGGTAGTAGGTTGTGTGGT #rat_gr190477_libT1S1 19 1 sblock11470 AGGTAGTAGGTTGTGTGGTTT #rat_gr190478_libT2S2 21 1 sblock11470 AGGTAGTAGGTTGTGTGGTTTC #rat_gr190479_libT5S2 22 1 sblock11470 GGTAGTAGGTTGTGTGGTT #rat_gr618546_libT5S1 19 1 sblock11470 GGTAGTAGGTTGTGTGGTT #rat_gr618546_libT5S2 19 1 sblock11470 GTAGTAGGTTGTGTGGTT #rat_gr630589_libT1S1 18 1 sblock11470 TCAGGGCAGTGATGTCGCCCCTCC #rat_gr819639_libT1S1 24 26 sblock11470 TCAGGGCAGTGATGTCGC #rat_gr819633_libT1S1 18 11 sblock11470 TCAGGGCAGTGATGTCGCCCCT #rat_gr819637_libT1S1 22 10 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT1S1 21 9 sblock11470 TCAGGGCAGTGATGTCGC #rat_gr819633_libT1S2 18 8 sblock11470 TCAGGGCAGTGATGTCGCCCCTCC #rat_gr819639_libT1S2 24 6 sblock11470 TCAGGGCAGTGATGTCGCCCCTCC #rat_gr819639_libT3S1 24 6 sblock11470 TCAGGGCAGTGATGTCGC #rat_gr819633_libT3S1 18 5 sblock11470 TCAGGGCAGTGATGTCGCC #rat_gr819634_libT1S1 19 5 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT1S2 21 4 sblock11470 TCAGGGCAGTGATGTCGCC #rat_gr819634_libT1S2 19 3 sblock11470 TCAGGGCAGTGATGTCGCCC #rat_gr819635_libT1S1 20 3 sblock11470 TCAGGGCAGTGATGTCGCCC #rat_gr819635_libT1S2 20 3 sblock11470 TCAGGGCAGTGATGTCGCCCCTC #rat_gr819638_libT1S2 23 3 sblock11470 TCAGGGCAGTGATGTCGC #rat_gr819633_libT4S1 18 2 sblock11470 TCAGGGCAGTGATGTCGCC #rat_gr819634_libT5S2 19 2 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT3S1 21 2 sblock11470 TCAGGGCAGTGATGTCGCCCCT #rat_gr819637_libT3S1 22 2 sblock11470 TCAGGGCAGTGATGTCGCCCCTC #rat_gr819638_libT1S1 23 2 sblock11470 TCAGGGCAGTGATGTCGCCCCTCC #rat_gr819639_libT3S2 24 2 sblock11470 TCAGGGCAGTGATGTCGCCCCTCC #rat_gr819639_libT4S1 24 2 sblock11470 TGGTTTCAGGGCAGTGATG #rat_gr1070758_libT5S2 19 1 sblock11470 TCAGGGCAGTGATGTCGC #rat_gr819633_libT3S2 18 1 sblock11470 TCAGGGCAGTGATGTCGCC #rat_gr819634_libT2S1 19 1 sblock11470 TCAGGGCAGTGATGTCGCC #rat_gr819634_libT3S1 19 1 sblock11470 TCAGGGCAGTGATGTCGCC #rat_gr819634_libT3S2 19 1 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT2S1 21 1 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT4S1 21 1 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT5S1 21 1 sblock11470 TCAGGGCAGTGATGTCGCCCC #rat_gr819636_libT5S2 21 1 sblock11470 TCAGGGCAGTGATGTCGCCCCT #rat_gr819637_libT3S2 22 1 sblock11470 TCAGGGCAGTGATGTCGCCCCT #rat_gr819637_libT4S1 22 1 sblock11470 TCAGGGCAGTGATGTCGCCCCTC #rat_gr819638_libT3S1 23 1 sblock11470 TCAGGGCAGTGATGTCGCCCCTCC #rat_gr819639_libT5S2 24 1 sblock11470 CAGGGCAGTGATGTCGCC #rat_gr299696_libT5S2 18 1 sblock11470 CAGGGCAGTGATGTCGCCC #rat_gr299697_libT1S2 19 1 sblock11470 CAGGGCAGTGATGTCGCCCC #rat_gr299698_libT1S2 20 1 sblock11470 CAGGGCAGTGATGTCGCCCC #rat_gr299698_libT5S1 20 1 sblock11470 CAGGGCAGTGATGTCGCCCCTCC #rat_gr299699_libT1S2 23 1 sblock11470 CAGGGCAGTGATGTCGCCCCTCCG #rat_gr299700_libT5S2 24 1 sblock11470 AGTGATGTCGCCCCTCCGA--AGA #rat_gr199405_libT1S1 22 1 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT1S1 21 169 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT1S2 21 96 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT1S1 18 91 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT5S1 21 85 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT1S2 18 71 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT1S1 22 55 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT2S2 21 46 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT5S2 21 46 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT3S1 18 45 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT3S1 21 44 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT5S1 18 39 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT2S1 21 37 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT2S2 18 27 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT4S2 18 23 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT5S1 22 22 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT1S1 20 21 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT4S1 21 21 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT4S2 21 21 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT2S1 18 19 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT1S2 20 19 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT1S2 22 18 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT3S2 18 16 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT5S2 18 15 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT4S2 22 15 sblock11470 CTATACAACCTACTGCCT #rat_gr414366_libT4S1 18 14 sblock11470 CTATACAACCTACTGCCTTCC #rat_gr414369_libT3S2 21 14 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT4S1 22 14 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT1S2 19 13 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT5S1 20 13 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT5S2 20 12 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT1S1 19 11 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT2S2 22 10 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT5S2 19 9 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT3S1 22 9 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT4S2 20 7 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT1S2 23 6 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT3S1 20 5 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT2S1 22 5 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT3S2 22 5 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT4S2 19 4 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT2S2 20 4 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT3S2 20 4 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT4S1 20 4 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT3S1 19 3 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT4S1 19 3 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libT5S2 22 3 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT2S1 23 3 sblock11470 TATACAACCTACTGCCTTCC #rat_gr790984_libT1S1 20 3 sblock11470 TATACAACCTACTGCCTTCC #rat_gr790984_libT2S2 20 3 sblock11470 TAACTATACAACCTACTGCCTTCCC #rat_gr717552_libT1S2 25 2 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT2S2 19 2 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT3S2 19 2 sblock11470 CTATACAACCTACTGCCTT #rat_gr414367_libT5S1 19 2 sblock11470 CTATACAACCTACTGCCTTC #rat_gr414368_libT2S1 20 2 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT3S1 23 2 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT4S2 23 2 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT5S2 23 2 sblock11470 TCCGA--AGATAACTATACAACC #rat_gr866651_libT1S1 21 1 sblock11470 TCCGA--AGATAACTATACAACCT #rat_gr866652_libT1S1 22 1 sblock11470 CCGA--AGATAACTATACAACCT #rat_gr365676_libT3S1 21 1 sblock11470 GA--AGATAACTATACAACCT #rat_gr485635_libT1S1 19 1 sblock11470 ACTATACAACCTACTGCCTT #rat_gr115971_libT4S2 20 1 sblock11470 CTATACAACCTACTGCCTTCCC #rat_gr414370_libMirbase_rno-let-7b* 22 1 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT1S1 23 1 sblock11470 CTATACAACCTACTGCCTTCCCT #rat_gr414371_libT3S2 23 1 sblock11470 CTATACAACCTACTGCCTTCCCTG #rat_gr414372_libT1S2 24 1 sblock11470 TATACAACCTACTGCCTTC #rat_gr790983_libT5S2 19 1 sblock11470 TATACAACCTACTGCCTTCCC #rat_gr790985_libT4S2 21 1 sblock11470 TATACAACCTACTGCCTTCCC #rat_gr790985_libT5S1 21 1 sblock11470 ATACAACCTACTGCCTTCC #rat_gr206580_libT1S2 19 1 sblock11470 ATACAACCTACTGCCTTCC #rat_gr206580_libT5S1 19 1 sblock11470 -------------------GCGGGGTGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTCGCCCCTCCGA--AGATAACTATACAACCTACTGCCTTCCCTGA---------------------- human101p84 CACCAAGACCGACTGCCCTTTGGGGTGAGGTAGTAGGTTGTATAGTTT-GGGGCTCTG-------CCCTGCTATGGGATAACTATACAATCTACTGTCTTTCCTGAAGTGGCTGTAATATCTGCGGTG mouseZ45p84 -------------------------TGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCTCCGA--AGATAACTATACAACCTACTGCCTTC--------------------------- **************** * **** **** ** **** * * ************* ****** *** sblock11470 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053759 ENSRNOG00000035636 rno-let-7b sblock11470 .(((((.(((((((((((((((((((((((((((..(((....))))))).... .)).)))))))))))))))))))))))))). 1.000 -47.60 # human101p84 ((((.(((...((.((((((..(((.(((..((((((((((((((((( (((((...) ))))).........))))))))))))))))..))))))..))).))).))....)))..)))) 0.910 -54.30 # mouseZ45p84 .(((((((((((((((((((((((.((((((.....))))))....)) )....)))))))))))))))))))). 0.866 -39.00 # #sblock11470 chromosome:7:123701205:123701289:1 Same_strand|Exonic_non-coding|ENSRNOT00000053759|ENSRNOG00000035636 ## Same_strand|Boundary_non-coding|ENSRNOT00000053759|ENSRNOG00000035636 ## ENSRNOG00000035636|miRNA|rno-let-7b|rno-let-7b [Source:miRBase;Acc:MI0000829] ## {MIR: rno-let-7b} #human101p84 chromosome:22:44887271:44887390:1 Same_strand|Boundary_non-coding|ENST00000362116|ENSG00000198986|miRNA|hsa-let-7a-3 [Source:miRBase;Acc:MI0000062] ## {MIR: hsa-let-7a-3} #mouseZ45p84 chromosome:15:85537729:85537853:1 Same_strand|Boundary_non-coding|ENSMUST00000083630|ENSMUSG00000065564|miRNA|mmu-let-7b [Source:miRBase;Acc:MI0000558] ## {MIR: mmu-let-7b} ========== sblock11521 (miRBase rno-mir-196a) [miRNAknown_lenNOK_cloningHIGH_randfoldOK] ========== #randfold sblock11521: 0.001 randfold humanZ33p84_sblock11521: 0.001 randfold mouseZ47p84_sblock11521: 0.001 #forester humanZ33p84_sblock11521: 1 forester mouseZ47p84_sblock11521: 1 #identity: 98.80 sblock11521 TAGGTAGTTTCATGTTGT #rat_gr782138_libT5S2 18 309 sblock11521 TAGGTAGTTTCATGTTGTT #rat_gr782139_libT5S1 19 304 sblock11521 TAGGTAGTTTCATGTTGT #rat_gr782138_libT5S1 18 260 sblock11521 TAGGTAGTTTCATGTTGTTGG #rat_gr782141_libT5S2 21 251 sblock11521 TAGGTAGTTTCATGTTGTTGGG #rat_gr782142_libT5S2 22 247 sblock11521 TAGGTAGTTTCATGTTGTTG #rat_gr782140_libT5S2 20 246 sblock11521 TAGGTAGTTTCATGTTGTT #rat_gr782139_libT5S2 19 205 sblock11521 TAGGTAGTTTCATGTTGTTG #rat_gr782140_libT5S1 20 181 sblock11521 TAGGTAGTTTCATGTTGTTGGGA #rat_gr782143_libT5S2 23 140 sblock11521 TAGGTAGTTTCATGTTGTTGGG #rat_gr782142_libT5S1 22 108 sblock11521 TAGGTAGTTTCATGTTGTTGGGA #rat_gr782143_libT5S1 23 98 sblock11521 TAGGTAGTTTCATGTTGTTGG #rat_gr782141_libT5S1 21 95 sblock11521 AGGTAGTTTCATGTTGTTGGG #rat_gr190529_libT5S2 21 6 sblock11521 AGGTAGTTTCATGTTGTTGGGA #rat_gr190530_libT5S1 22 5 sblock11521 AGGTAGTTTCATGTTGTT #rat_gr190526_libT5S1 18 4 sblock11521 TAGGTAGTTTCATGTTGTTGGGA #rat_gr782143_libT1S1 23 3 sblock11521 TAGGTAGTTTCATGTTGTTGG #rat_gr782141_libT1S1 21 2 sblock11521 AGGTAGTTTCATGTTGTTGG #rat_gr190528_libT5S2 20 2 sblock11521 AGGTAGTTTCATGTTGTTGGG #rat_gr190529_libT5S1 21 2 sblock11521 TAGGTAGTTTCATGTTGT #rat_gr782138_libT3S2 18 1 sblock11521 TAGGTAGTTTCATGTTGTT #rat_gr782139_libT4S2 19 1 sblock11521 TAGGTAGTTTCATGTTGTTG #rat_gr782140_libT3S2 20 1 sblock11521 TAGGTAGTTTCATGTTGTTGG #rat_gr782141_libT3S2 21 1 sblock11521 TAGGTAGTTTCATGTTGTTGGG #rat_gr782142_libMirbase_rno-miR-196a 22 1 sblock11521 TAGGTAGTTTCATGTTGTTGGG #rat_gr782142_libT2S1 22 1 sblock11521 TAGGTAGTTTCATGTTGTTGGGA #rat_gr782143_libT4S1 23 1 sblock11521 AGGTAGTTTCATGTTGTT #rat_gr190526_libT5S2 18 1 sblock11521 AGGTAGTTTCATGTTGTTG #rat_gr190527_libT5S1 19 1 sblock11521 AGGTAGTTTCATGTTGTTG #rat_gr190527_libT5S2 19 1 sblock11521 TCGGCAACAAGAAACTGCCTG #rat_gr890056_libT5S1 21 3 sblock11521 TCGGCAACAAGAAACTGCC #rat_gr890055_libT5S2 19 2 sblock11521 TCGGCAACAAGAAACTGCCTGA #rat_gr890057_libT5S2 22 2 sblock11521 TCGGCAACAAGAAACTGCCTG #rat_gr890056_libT5S2 21 1 sblock11521 TCGGCAACAAGAAACTGCCTGA #rat_gr890057_libMirbase_rno-miR-196a* 22 1 sblock11521 CGGCAACAAGAAACTGCC #rat_gr397780_libT5S1 18 1 sblock11521 CGGCAACAAGAAACTGCC #rat_gr397780_libT5S2 18 1 sblock11521 CGGCAACAAGAAACTGCCTGAGT #rat_gr397781_libT5S2 23 1 sblock11521 -----TGTTTGCTCAGCTGATCTGTGGCTTAGGTAGTTTCATGTTGTTGGGATTGAGTTTTGAACTCGGCAACAAGAAACTGCCTGAGTTACATCAGTCGGTTTTCGTCGAGGGC- humanZ33p84 -GCCCTGCTCGCTCAGCTGATCTGTGGCTTAGGTAGTTTCATGTTGTTGGGATTGAGTTTTGAACTCGGCAACAAGAAACTGCCTGAGTTACATCAGTCGGTTTTCGTCGAGGGC- mouseZ47p84 GGCCCTGCTTGCTCAGCTGATCTGTGGCTTAGGTAGTTTCATGTTGTTGGGATTGAGTTTTGAACTCGGCAACAAGAAACTGCCTGAGTTACATCAGTCGGTTTTCGTCGAGGGCC ** * ********************************************************************************************************* sblock11521 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053737 ENSRNOG00000035614 rno-mir-196a sblock11521 .....((((.(((((..((((((((((((((((((.((((((((((.(..(...)..).)))))))))).)))))))))))))))))))))))(((......))).)))) 1.000 -48.80 # humanZ33p84 (((((...((...(((((((.((((((((((((((((((.((((((((((.((.......)).)))))))))).))))))))))))))))))...)))))))..))...))))) 0.995 -55.10 # mouseZ47p84 ((((((...((...(((((((.((((((((((((((((((.((((((((((.((.......)).)))))))))).))))))))))))))))))...)))))))..))...)))))) 0.973 -56.70 # #sblock11521 chromosome:7:141736759:141736868:1 Same_strand|Exonic_non-coding|ENSRNOT00000053737|ENSRNOG00000035614 ## ENSRNOG00000035614|miRNA|rno-mir-196a|rno-mir-196a [Source:miRBase;Acc:MI0000940] ## {MIR: rno-mir-196a} #humanZ33p84 chromosome:12:52671785:52671898:1 Same_strand|Boundary_non-coding|ENST00000385189|ENSG00000207924|miRNA|hsa-mir-196a-2 [Source:miRBase;Acc:MI0000279] ## {MIR: hsa-mir-196a-2} #mouseZ47p84 chromosome:15:102803767:102803882:1 Same_strand|Boundary_non-coding|ENSMUST00000083554|ENSMUSG00000065488|miRNA|mmu-mir-196a-2 [Source:miRBase;Acc:MI0000553] ## {MIR: mmu-mir-196a-2} ========== sblock11913 (miRBase rno-mir-128-2) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock11913: 0.001 randfold humanZ16p85_sblock11913: 0.014 randfold mouseZ20p85_sblock11913: 0.004 #forester humanZ16p85_sblock11913: 0.951624 forester mouseZ20p85_sblock11913: 1 #identity: 97.85 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT1S1 22 51306 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT1S2 22 41899 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT1S1 18 32658 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT1S2 18 24447 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT1S1 19 24142 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT1S2 19 16914 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT1S1 20 13317 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT1S2 20 9439 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT1S1 23 2493 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT1S2 23 2076 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT1S1 21 1266 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT1S2 21 939 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT3S1 22 592 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT4S2 22 540 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT3S1 18 493 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT3S2 22 451 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT3S1 19 401 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT3S2 18 381 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT4S2 18 354 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT4S2 19 281 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT4S1 22 277 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT3S2 19 270 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT3S1 20 261 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT1S1 21 237 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT2S2 22 236 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT1S2 21 222 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT5S1 22 187 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT3S2 20 184 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT2S1 22 181 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT2S2 18 176 sblock11913 CACAGTGAACCGGTCTCTT #rat_gr278563_libT1S1 19 162 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT4S1 18 155 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT4S1 19 144 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT2S2 19 141 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT4S2 20 130 sblock11913 TCACAGTGAACCGGTCTCTTTC #rat_gr811757_libT5S2 22 126 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT2S1 18 124 sblock11913 CACAGTGAACCGGTCTCT #rat_gr278562_libT1S1 18 123 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT5S1 18 122 sblock11913 TCACAGTGAACCGGTCTCTTTCCC #rat_gr811759_libT1S1 24 101 sblock11913 TCACAGTGAACCGGTCTC #rat_gr811753_libT5S2 18 100 sblock11913 CTCACAGTGAACCGGTCTCTTTC #rat_gr417358_libT1S1 23 93 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT2S1 19 87 sblock11913 CACAGTGAACCGGTCTCTT #rat_gr278563_libT1S2 19 78 sblock11913 CACAGTGAACCGGTCTCT #rat_gr278562_libT1S2 18 77 sblock11913 TCACAGTGAACCGGTCTCTTTCCC #rat_gr811759_libT1S2 24 74 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT3S1 21 74 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT5S1 19 71 sblock11913 TCACAGTGAACCGGTCTCT #rat_gr811754_libT5S2 19 71 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT2S2 20 66 sblock11913 CTCACAGTGAACCGGTCTC #rat_gr417354_libT1S1 19 63 sblock11913 CTCACAGTGAACCGGTCTCTTTC #rat_gr417358_libT1S2 23 57 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT4S1 20 50 sblock11913 CTCACAGTGAACCGGTCTCT #rat_gr417355_libT1S1 20 47 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT5S1 20 43 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT2S1 20 38 sblock11913 CTCACAGTGAACCGGTCTC #rat_gr417354_libT1S2 19 38 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT3S2 21 35 sblock11913 TCACAGTGAACCGGTCTCTT #rat_gr811755_libT5S2 20 34 sblock11913 CTCACAGTGAACCGGTCTCT #rat_gr417355_libT1S2 20 34 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT3S2 23 31 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT3S1 23 30 sblock11913 CTCACAGTGAACCGGTCTCTT #rat_gr417356_libT1S1 21 28 sblock11913 CACAGTGAACCGGTCTCTTTCC #rat_gr278566_libT1S1 22 24 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT4S2 23 24 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT2S2 21 24 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT4S2 21 19 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT5S2 21 17 sblock11913 CACAGTGAACCGGTCTCTTTCC #rat_gr278566_libT1S2 22 13 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT4S1 23 12 sblock11913 ACAGTGAACCGGTCTCTTTC #rat_gr81896_libT1S2 20 12 sblock11913 CTCACAGTGAACCGGTCT #rat_gr417353_libT1S1 18 12 sblock11913 ACAGTGAACCGGTCTCTTTC #rat_gr81896_libT1S1 20 11 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT2S1 21 11 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT4S1 21 10 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libT5S1 21 10 sblock11913 CTCACAGTGAACCGGTCTCTT #rat_gr417356_libT1S2 21 9 sblock11913 CACAGTGAACCGGTCTCTTTCCC #rat_gr278567_libT1S1 23 8 sblock11913 CACAGTGAACCGGTCTCTTT #rat_gr278564_libT1S1 20 8 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT5S1 23 6 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT3S2 21 6 sblock11913 CTCACAGTGAACCGGTCTCTTTCC #rat_gr417359_libT1S2 24 5 sblock11913 CACAGTGAACCGGTCTCTT #rat_gr278563_libT3S1 19 5 sblock11913 CACAGTGAACCGGTCTCTTTCCC #rat_gr278567_libT1S2 23 4 sblock11913 TCACAGTGAACCGGTCTCTTTCCC #rat_gr811759_libT3S1 24 4 sblock11913 CACAGTGAACCGGTCTCTTT #rat_gr278564_libT1S2 20 4 sblock11913 TCACAGTGAACCGGTCTCTTTCCC #rat_gr811759_libT4S2 24 3 sblock11913 AGTGAACCGGTCTCTTTC #rat_gr198857_libT1S1 18 3 sblock11913 CAGTGAACCGGTCTCTTTC #rat_gr302986_libT1S1 19 3 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT3S1 21 3 sblock11913 CAGTGAACCGGTCTCTTTC #rat_gr302986_libT1S2 19 2 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT2S2 21 2 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT4S2 21 2 sblock11913 ACAGTGAACCGGTCTCTTT #rat_gr81895_libT1S1 19 2 sblock11913 CACAGTGAACCGGTCTCT #rat_gr278562_libT4S1 18 2 sblock11913 TCTCACAGTGAACCGGTCTC #rat_gr895587_libT1S1 20 2 sblock11913 CACAGTGAACCGGTCTCTTTCCC #rat_gr278567_libT2S1 23 1 sblock11913 TCACAGTGAACCGGTCTCTTTCCC #rat_gr811759_libT2S2 24 1 sblock11913 TCACAGTGAACCGGTCTCTTTCCC #rat_gr811759_libT4S1 24 1 sblock11913 CTCACAGTGAACCGGTCTCTTTCCC #rat_gr417360_libT1S1 25 1 sblock11913 ACAGTGAACCGGTCTCTTTCC #rat_gr81897_libT1S2 21 1 sblock11913 CACAGTGAACCGGTCTCTTTCC #rat_gr278566_libT3S1 22 1 sblock11913 CACAGTGAACCGGTCTCTTTCC #rat_gr278566_libT5S2 22 1 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT2S1 23 1 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT2S2 23 1 sblock11913 TCACAGTGAACCGGTCTCTTTCC #rat_gr811758_libT5S2 23 1 sblock11913 CAGTGAACCGGTCTCTTTC #rat_gr302986_libT3S2 19 1 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT2S1 21 1 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT4S1 21 1 sblock11913 CACAGTGAACCGGTCTCTTTC #rat_gr278565_libT5S1 21 1 sblock11913 CTCACAGTGAACCGGTCTCTTTC #rat_gr417358_libT3S1 23 1 sblock11913 CTCACAGTGAACCGGTCTCTTTC #rat_gr417358_libT4S2 23 1 sblock11913 ACAGTGAACCGGTCTCTTT #rat_gr81895_libT1S2 19 1 sblock11913 CACAGTGAACCGGTCTCTTT #rat_gr278564_libT3S1 20 1 sblock11913 TCACAGTGAACCGGTCTCTTT #rat_gr811756_libMirbase_rno-miR-128 21 1 sblock11913 CTCACAGTGAACCGGTCTCTTT #rat_gr417357_libT1S1 22 1 sblock11913 ACAGTGAACCGGTCTCTT #rat_gr81894_libT1S1 18 1 sblock11913 ACAGTGAACCGGTCTCTT #rat_gr81894_libT1S2 18 1 sblock11913 CACAGTGAACCGGTCTCTT #rat_gr278563_libT2S1 19 1 sblock11913 CACAGTGAACCGGTCTCTT #rat_gr278563_libT2S2 19 1 sblock11913 CACAGTGAACCGGTCTCTT #rat_gr278563_libT4S2 19 1 sblock11913 TCTCACAGTGAACCGGTCTCTT #rat_gr895588_libT1S1 22 1 sblock11913 CACAGTGAACCGGTCTCT #rat_gr278562_libT4S2 18 1 sblock11913 CACAGTGAACCGGTCTCT #rat_gr278562_libT5S2 18 1 sblock11913 CTCACAGTGAACCGGTCTCT #rat_gr417355_libT4S2 20 1 sblock11913 CTCACAGTGAACCGGTCTC #rat_gr417354_libT2S2 19 1 sblock11913 CTCACAGTGAACCGGTCTC #rat_gr417354_libT3S1 19 1 sblock11913 CTCACAGTGAACCGGTCTC #rat_gr417354_libT4S1 19 1 sblock11913 CTCACAGTGAACCGGTCTC #rat_gr417354_libT4S2 19 1 sblock11913 TCTCACAGTGAACCGGTCTC #rat_gr895587_libT1S2 20 1 sblock11913 CTCACAGTGAACCGGTCT #rat_gr417353_libT1S2 18 1 sblock11913 TCTCACAGTGAACCGGTC #rat_gr895586_libT1S1 18 1 sblock11913 GGGGGCCGATGCACTGTAAGA #rat_gr612139_libT1S1 21 73 sblock11913 GGGGGCCGATGCACTGTAAGA #rat_gr612139_libT1S2 21 51 sblock11913 GGGGGCCGATGCACTGTAAGAGA #rat_gr612141_libT1S1 23 47 sblock11913 GGGGGCCGATGCACTGTA #rat_gr612136_libT1S1 18 37 sblock11913 GGGGGCCGATGCACTGTAAGAGA #rat_gr612141_libT1S2 23 34 sblock11913 GGGGGCCGATGCACTGTA #rat_gr612136_libT1S2 18 31 sblock11913 GGGGGCCGATGCACTGTAAGAG #rat_gr612140_libT1S1 22 23 sblock11913 GGGGGCCGATGCACTGTAAG #rat_gr612138_libT1S1 20 19 sblock11913 GGGGGCCGATGCACTGTAAG #rat_gr612138_libT1S2 20 17 sblock11913 GGGGGCCGATGCACTGTAA #rat_gr612137_libT1S1 19 15 sblock11913 GGGGGCCGATGCACTGTAA #rat_gr612137_libT1S2 19 15 sblock11913 GGGGGCCGATGCACTGTAAGAG #rat_gr612140_libT1S2 22 9 sblock11913 GGGGGGCCGATGCACTGTAA #rat_gr612377_libT1S2 20 5 sblock11913 GGGGGGCCGATGCACTGTAAGA #rat_gr612379_libT1S1 22 4 sblock11913 GGGGGGCCGATGCACTGTAAGAGA #rat_gr612381_libT1S1 24 3 sblock11913 GGGGGCCGATGCACTGTAAGAGA #rat_gr612141_libT3S1 23 2 sblock11913 GGGGGGCCGATGCACTGTAAGA #rat_gr612379_libT1S2 22 2 sblock11913 GGGGGGCCGATGCACTGTAAG #rat_gr612378_libT1S2 21 2 sblock11913 GGGGGGCCGATGCACTGT #rat_gr612375_libT1S1 18 2 sblock11913 ATGCACTGTAAGAGAGTGAGTAGCAG #rat_gr229073_libT3S2 26 1 sblock11913 GATGCACTGTAAGAGAGTGAGT #rat_gr522159_libT1S2 22 1 sblock11913 GGGGGCCGATGCACTGTAAGAG #rat_gr612140_libT3S2 22 1 sblock11913 GGGGGGCCGATGCACTGTAAGAG #rat_gr612380_libT1S1 23 1 sblock11913 GGGGGCCGATGCACTGTAAGA #rat_gr612139_libT3S1 21 1 sblock11913 GGGGGCCGATGCACTGTAAGA #rat_gr612139_libT3S2 21 1 sblock11913 GGGGGGCCGATGCACTGTAAG #rat_gr612378_libT1S1 21 1 sblock11913 GGGGCCGATGCACTGTAA #rat_gr611121_libT1S1 18 1 sblock11913 GGGGGGCCGATGCACTGTAA #rat_gr612377_libT1S1 20 1 sblock11913 GGGGGCCGATGCACTGTA #rat_gr612136_libT3S2 18 1 sblock11913 GGGGGGCCGATGCACTGTA #rat_gr612376_libT1S2 19 1 sblock11913 AAGGGGGGCCGATGCACTGT #rat_gr53078_libT1S2 20 1 sblock11913 TGTGCAGTGGGAAGGGGGGCCGATGCACTGTAAGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTGTGTC humanZ16p85 -----------AAGGGGGGCCGATACACTGTACGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTC----------- mouseZ20p85 -----------AAGGGGGGCCGATGCACTGTAAGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTC----------- ************* ******* **************************************** sblock11913 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ #ENSRNOT00000011870 ENSRNOG00000008919 RGD1307215 sblock11913 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ #ENSRNOT00000042854 ENSRNOG00000008919 RGD1307215 sblock11913 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ #ENSRNOT00000037222 ENSRNOG00000008919 RGD1307215 sblock11913 .....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>..... #ENSRNOT00000053730 ENSRNOG00000035607 rno-mir-128-2 sblock11913 .(..(((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).)))))))..). 1.000 -40.50 # humanZ16p85 .((((((((((...((((((..((((.((.....))..))))))))))...)))))))))). 0.954 -22.80 # mouseZ20p85 .((((((((((...((((((..((((.((.....))..))))))))))...)))))))))). 1.000 -23.90 # #sblock11913 chromosome:8:116727237:116727320:-1 Same_strand|Boundary_non-coding|ENSRNOT00000037199|ENSRNOG00000008919 ## Same_strand|Intronic_coding|ENSRNOT00000042854|ENSRNOG00000008919 ## Same_strand|Exonic_non-coding|ENSRNOT00000053730|ENSRNOG00000035607 ## ENSRNOG00000035607|miRNA|rno-mir-128-2|rno-mir-128-2 [Source:miRBase;Acc:MI0000901] ## ENSRNOG00000008919|protein_coding|RGD1307215|RGD1307215 protein. [Source:UniProtKB/TrEMBL;Acc:Q5FVI0] ## {MIR: rno-mir-128-2} #humanZ16p85 chromosome:3:35760952:35761075:1 Same_strand|Boundary_non-coding|ENST00000396482|ENSG00000172995|protein_coding|cAMP-regulated phosphoprotein 21 (ARPP-21)(Thymocyte cAMP-regulated phosphoprotein) [Source:UniProtKB/Swiss-Prot;Acc:Q9UBL0] ## Same_strand|Intronic_coding|ENST00000187397|ENSG00000172995|protein_coding|cAMP-regulated phosphoprotein 21 (ARPP-21)(Thymocyte cAMP-regulated phosphoprotein) [Source:UniProtKB/Swiss-Prot;Acc:Q9UBL0] ## {MIR: hsa-mir-128-2} #mouseZ20p85 chromosome:9:112021116:112021239:-1 Same_strand|Intronic_coding|ENSMUST00000111872|ENSMUSG00000032503|protein_coding|cyclic AMP-regulated phosphoprotein, 21 Gene [Source:MGI Symbol;Acc:MGI:107562] ## Same_strand|Intronic_non-coding|ENSMUST00000070218|ENSMUSG00000032503|protein_coding|cyclic AMP-regulated phosphoprotein, 21 Gene [Source:MGI Symbol;Acc:MGI:107562] ## Same_strand|Boundary_non-coding|ENSMUST00000027590|ENSMUSG00000032503|protein_coding|cyclic AMP-regulated phosphoprotein, 21 Gene [Source:MGI Symbol;Acc:MGI:107562] ## {MIR: mmu-mir-128-2} ========== sblock11981 (miRBase rno-mir-125b-1) [miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK] ========== #randfold sblock11981: 0.001 randfold humanZ19p85_sblock11981: 0.001 randfold mouseZ24p85_sblock11981: 0.001 #forester humanZ19p85_sblock11981: 1 forester mouseZ24p85_sblock11981: 1 #identity: 96.06 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT1S1 22 62318 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT1S2 22 60186 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT1S2 19 27669 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT4S2 22 26796 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT1S1 19 26431 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT4S1 22 20112 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT1S2 20 17976 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT1S1 20 17445 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT5S2 22 12623 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT5S1 22 11824 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT4S2 19 11497 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT1S2 21 11196 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT1S1 18 10879 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT1S2 18 10537 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT1S1 21 9835 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT3S1 22 9180 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT4S2 20 7092 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT4S1 19 6666 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT3S2 22 6087 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT2S2 22 5804 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT4S2 21 5460 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libT2S1 22 5051 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT5S1 19 4649 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT5S2 19 4503 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT3S1 19 4390 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT4S1 20 4207 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT4S2 18 4005 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT4S1 21 3876 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT5S2 21 3375 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT3S2 19 3276 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT5S2 20 3257 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT2S1 19 3026 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT4S1 18 2687 sblock11981 TCCCTGAGACCCTAACTTG #rat_gr857417_libT2S2 19 2551 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT5S1 20 2411 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT5S1 21 2293 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT3S1 20 2028 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT5S2 18 1825 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT3S1 21 1719 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT3S2 20 1472 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT5S1 18 1418 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT3S2 21 1270 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT2S2 21 1249 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT3S1 18 1166 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT2S2 20 1139 sblock11981 TCCCTGAGACCCTAACTTGT #rat_gr857418_libT2S1 20 1013 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT3S2 18 980 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT2S2 18 911 sblock11981 TCCCTGAGACCCTAACTT #rat_gr857416_libT2S1 18 854 sblock11981 TCCCTGAGACCCTAACTTGTG #rat_gr857419_libT2S1 21 811 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT1S2 21 701 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT1S1 21 672 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT1S1 23 518 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT1S2 23 461 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT4S2 21 370 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT4S2 23 362 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT4S1 21 318 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT4S1 23 227 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT1S1 18 215 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT1S1 19 210 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT1S2 19 202 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT1S2 18 163 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT5S2 23 144 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT2S2 23 142 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT1S2 20 141 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT2S1 23 139 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT5S1 23 136 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT5S1 21 134 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT3S1 23 118 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT3S1 21 110 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT4S2 19 106 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT5S2 21 95 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT2S1 21 91 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT1S1 20 90 sblock11981 TCCCTGAGACCCTAACTTGTGAT #rat_gr857424_libT3S2 23 82 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT1S1 25 80 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT3S2 21 77 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT1S2 25 69 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT4S1 20 69 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT4S2 20 66 sblock11981 CCCTGAGACCCTAACTTGTGA #rat_gr361488_libT2S2 21 63 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT4S2 18 62 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT4S1 18 50 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT5S2 25 49 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT4S1 19 49 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT5S1 19 36 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT5S2 19 34 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT4S2 25 28 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT5S1 25 28 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT5S1 20 28 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT3S1 18 26 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT4S1 25 25 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT2S2 20 24 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT5S2 18 21 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT2S1 19 20 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT3S1 19 19 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT3S1 20 19 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT5S2 20 19 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT3S2 19 17 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT3S2 18 16 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT2S1 20 16 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT1S1 20 16 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT2S1 18 14 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT5S1 18 14 sblock11981 CCCTGAGACCCTAACTTGTG #rat_gr361487_libT3S2 20 14 sblock11981 CCCTGAGACCCTAACTTG #rat_gr361485_libT2S2 18 13 sblock11981 CCCTGAGACCCTAACTTGT #rat_gr361486_libT2S2 19 13 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT1S2 19 13 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT1S2 24 11 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT1S1 22 11 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT1S1 23 10 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT1S2 23 10 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT1S2 20 10 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT1S1 19 9 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT1S1 24 7 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT4S2 23 6 sblock11981 GTCCCTGAGACCCTAACT #rat_gr637474_libT1S1 18 5 sblock11981 GTCCCTGAGACCCTAACTTGT #rat_gr637477_libT4S2 21 5 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT1S2 22 5 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT2S2 22 5 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT4S2 20 5 sblock11981 GTCCCTGAGACCCTAACT #rat_gr637474_libT1S2 18 4 sblock11981 GTCCCTGAGACCCTAACT #rat_gr637474_libT4S2 18 4 sblock11981 GTCCCTGAGACCCTAACTT #rat_gr637475_libT1S1 19 4 sblock11981 GTCCCTGAGACCCTAACTT #rat_gr637475_libT1S2 19 4 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT4S2 24 4 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT5S1 24 4 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT3S1 25 4 sblock11981 TCCCTGAGACCCTAACTTGTGATGTT #rat_gr857427_libT1S1 26 4 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT5S2 20 4 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT5S2 19 4 sblock11981 GTCCCTGAGACCCTAACTTGTG #rat_gr637478_libT1S1 22 3 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT2S1 23 3 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT3S1 23 3 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT4S1 23 3 sblock11981 CCTGAGACCCTAACTTGT #rat_gr377784_libT1S1 18 3 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT1S2 19 3 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT4S2 19 3 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT3S2 20 3 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT4S2 19 3 sblock11981 GTCCCTGAGACCCTAACT #rat_gr637474_libT4S1 18 2 sblock11981 GTCCCTGAGACCCTAACTTG #rat_gr637476_libT1S1 20 2 sblock11981 GTCCCTGAGACCCTAACTTG #rat_gr637476_libT1S2 20 2 sblock11981 GTCCCTGAGACCCTAACTTGTG #rat_gr637478_libT4S1 22 2 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT5S1 23 2 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT3S1 24 2 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT5S2 24 2 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT2S1 25 2 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT4S1 22 2 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT4S2 22 2 sblock11981 CCCTGAGACCCTAACTTGTGATGT #rat_gr361492_libT4S2 24 2 sblock11981 CCTGAGACCCTAACTTGT #rat_gr377784_libT1S2 18 2 sblock11981 CCTGAGACCCTAACTTGT #rat_gr377784_libT4S2 18 2 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT2S1 19 2 sblock11981 CTGAGACCCTAACTTGTG #rat_gr438295_libT1S2 18 2 sblock11981 CTGAGACCCTAACTTGTG #rat_gr438295_libT3S1 18 2 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT3S1 19 2 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT3S2 19 2 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT5S1 19 2 sblock11981 TGAGACCCTAACTTGTGAT #rat_gr941326_libT1S2 19 2 sblock11981 AGTCCCTGAGACCCTAAC #rat_gr197306_libT1S1 18 1 sblock11981 AGTCCCTGAGACCCTAAC #rat_gr197306_libT1S2 18 1 sblock11981 GTCCCTGAGACCCTAACT #rat_gr637474_libT5S2 18 1 sblock11981 GTCCCTGAGACCCTAACTT #rat_gr637475_libT3S1 19 1 sblock11981 GTCCCTGAGACCCTAACTT #rat_gr637475_libT4S1 19 1 sblock11981 GTCCCTGAGACCCTAACTT #rat_gr637475_libT4S2 19 1 sblock11981 GTCCCTGAGACCCTAACTTG #rat_gr637476_libT4S1 20 1 sblock11981 GTCCCTGAGACCCTAACTTGT #rat_gr637477_libT1S1 21 1 sblock11981 GTCCCTGAGACCCTAACTTGT #rat_gr637477_libT1S2 21 1 sblock11981 GTCCCTGAGACCCTAACTTGT #rat_gr637477_libT3S1 21 1 sblock11981 GTCCCTGAGACCCTAACTTGT #rat_gr637477_libT3S2 21 1 sblock11981 GTCCCTGAGACCCTAACTTGT #rat_gr637477_libT5S2 21 1 sblock11981 GTCCCTGAGACCCTAACTTGTG #rat_gr637478_libT3S2 22 1 sblock11981 GTCCCTGAGACCCTAACTTGTG #rat_gr637478_libT4S2 22 1 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT3S2 23 1 sblock11981 GTCCCTGAGACCCTAACTTGTGA #rat_gr637479_libT5S2 23 1 sblock11981 TCCCTGAGACCCTAACTTGTGA #rat_gr857420_libMirbase_rno-miR-125b-5p 22 1 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT2S2 24 1 sblock11981 TCCCTGAGACCCTAACTTGTGATG #rat_gr857425_libT4S1 24 1 sblock11981 TCCCTGAGACCCTAACTTGTGATGT #rat_gr857426_libT2S2 25 1 sblock11981 TCCCTGAGACCCTAACTTGTGATGTT #rat_gr857427_libT1S2 26 1 sblock11981 TCCCTGAGACCCTAACTTGTGATGTT #rat_gr857427_libT4S1 26 1 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT2S1 22 1 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT3S1 22 1 sblock11981 CCCTGAGACCCTAACTTGTGAT #rat_gr361491_libT5S1 22 1 sblock11981 CCCTGAGACCCTAACTTGTGATGT #rat_gr361492_libT1S1 24 1 sblock11981 CCCTGAGACCCTAACTTGTGATGT #rat_gr361492_libT1S2 24 1 sblock11981 CCCTGAGACCCTAACTTGTGATGT #rat_gr361492_libT4S1 24 1 sblock11981 CCTGAGACCCTAACTTGT #rat_gr377784_libT3S1 18 1 sblock11981 CCTGAGACCCTAACTTGT #rat_gr377784_libT3S2 18 1 sblock11981 CCTGAGACCCTAACTTGT #rat_gr377784_libT5S2 18 1 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT1S1 19 1 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT4S1 19 1 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT5S1 19 1 sblock11981 CCTGAGACCCTAACTTGTG #rat_gr377785_libT5S2 19 1 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT2S2 20 1 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT3S1 20 1 sblock11981 CCTGAGACCCTAACTTGTGA #rat_gr377786_libT4S1 20 1 sblock11981 CTGAGACCCTAACTTGTG #rat_gr438295_libT4S1 18 1 sblock11981 CTGAGACCCTAACTTGTG #rat_gr438295_libT5S2 18 1 sblock11981 CTGAGACCCTAACTTGTGA #rat_gr438296_libT2S2 19 1 sblock11981 TGAGACCCTAACTTGTGA #rat_gr941324_libT4S2 18 1 sblock11981 GAGACCCTAACTTGTGAT #rat_gr504390_libT1S2 18 1 sblock11981 GAGACCCTAACTTGTGAT #rat_gr504390_libT2S2 18 1 sblock11981 GAGACCCTAACTTGTGAT #rat_gr504390_libT4S2 18 1 sblock11981 TGTTTACCGTTTAAATCC #rat_gr1093911_libT4S2 18 2 sblock11981 TGTTTACCGTTTAAATCC #rat_gr1093911_libT1S2 18 1 sblock11981 ACGGGTTAGGCTCTTGGGA #rat_gr113396_libT1S1 19 28 sblock11981 ACGGGTTAGGCTCTTGGGA #rat_gr113396_libT1S2 19 22 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT1S1 20 20 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT1S2 20 11 sblock11981 ACGGGTTAGGCTCTTGGGA #rat_gr113396_libT4S2 19 10 sblock11981 CACGGGTTAGGCTCTTGGGA #rat_gr282872_libT1S1 20 8 sblock11981 ACGGGTTAGGCTCTTGGG #rat_gr113395_libT1S1 18 8 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT1S1 21 7 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT4S2 20 4 sblock11981 TCCACGGGTTAGGCTCTT #rat_gr830491_libT1S2 18 3 sblock11981 CACGGGTTAGGCTCTTGGGA #rat_gr282872_libT1S2 20 3 sblock11981 ACGGGTTAGGCTCTTGGG #rat_gr113395_libT4S2 18 3 sblock11981 TCCACGGGTTAGGCTCTT #rat_gr830491_libT1S1 18 2 sblock11981 TCCACGGGTTAGGCTCTTG #rat_gr830492_libT1S1 19 2 sblock11981 TCCACGGGTTAGGCTCTTG #rat_gr830492_libT1S2 19 2 sblock11981 TCCACGGGTTAGGCTCTTGG #rat_gr830493_libT1S1 20 2 sblock11981 ACGGGTTAGGCTCTTGGG #rat_gr113395_libT3S1 18 2 sblock11981 ACGGGTTAGGCTCTTGGGA #rat_gr113396_libT4S1 19 2 sblock11981 ACGGGTTAGGCTCTTGGGA #rat_gr113396_libT5S1 19 2 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT4S1 20 2 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT4S1 21 2 sblock11981 TCCACGGGTTAGGCTCTTG #rat_gr830492_libT5S2 19 1 sblock11981 TCCACGGGTTAGGCTCTTGGGA #rat_gr830494_libT4S2 22 1 sblock11981 TCCACGGGTTAGGCTCTTGGGAG #rat_gr830495_libT4S2 23 1 sblock11981 CCACGGGTTAGGCTCTTGGGA #rat_gr329146_libT1S1 21 1 sblock11981 CACGGGTTAGGCTCTTGG #rat_gr282871_libT1S1 18 1 sblock11981 CACGGGTTAGGCTCTTGGGA #rat_gr282872_libT4S2 20 1 sblock11981 CACGGGTTAGGCTCTTGGGA #rat_gr282872_libT5S2 20 1 sblock11981 CACGGGTTAGGCTCTTGGGAG #rat_gr282873_libT1S1 21 1 sblock11981 CACGGGTTAGGCTCTTGGGAGC #rat_gr282876_libT1S1 22 1 sblock11981 ACGGGTTAGGCTCTTGGG #rat_gr113395_libT1S2 18 1 sblock11981 ACGGGTTAGGCTCTTGGG #rat_gr113395_libT4S1 18 1 sblock11981 ACGGGTTAGGCTCTTGGGA #rat_gr113396_libT3S2 19 1 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT2S2 20 1 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT3S1 20 1 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT5S1 20 1 sblock11981 ACGGGTTAGGCTCTTGGGAG #rat_gr113397_libT5S2 20 1 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT1S2 21 1 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT2S2 21 1 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT3S2 21 1 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT4S2 21 1 sblock11981 ACGGGTTAGGCTCTTGGGAGC #rat_gr113400_libT5S1 21 1 sblock11981 ACGGGTTAGGCTCTTGGGAGCT #rat_gr113401_libMirbase_rno-miR-125b-3p 22 1 sblock11981 ACGGGTTAGGCTCTTGGGAGCT #rat_gr113401_libT1S2 22 1 sblock11981 ACGGGTTAGGCTCTTGGGAGCT #rat_gr113401_libT4S2 22 1 sblock11981 ----------TGCGCTCCCCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGC------------ humanZ19p85 ----CATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTG mouseZ24p85 GGAATCGTGTTGCGCTCCCCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGGGTCGTGCCTTTGCATCGCT ******** ********************************************************************** ******* sblock11981 +++++ +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +++++ #ENSRNOT00000059997 ENSRNOG00000039200 2610203C20Rik sblock11981 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053673 ENSRNOG00000035550 rno-mir-125b-1 sblock11981 .((((..(.(.(((..((..(((.(((((((((((..(((((.....))))).))))))))))).)))..))..))).).)..)))) 1.000 -37.40 # humanZ19p85 ...(((.((((..(((.(((..((..(((.(((((((((((..(((((.....))))).))))))))))).)))..))..))).)))..))))....)))..... 1.000 -44.50 # mouseZ24p85 .....(((((.((((..(((.(((..((..(((.(((((((((((..(((((.....))))).))))))))))).)))..))..))).)))..))))....))).)).. 0.996 -46.90 # #sblock11981 chromosome:8:44570155:44570241:1 Same_strand|Exonic_non-coding|ENSRNOT00000053673|ENSRNOG00000035550 ## Same_strand|Boundary_non-coding|ENSRNOT00000053673|ENSRNOG00000035550 ## Same_strand|Intronic_coding|ENSRNOT00000059997|ENSRNOG00000039200 ## ENSRNOG00000039200|protein_coding|2610203C20Rik|RIKEN cDNA 2610203C20 gene Gene [Source:MGI Symbol;Acc:MGI:1917705] ## ENSRNOG00000035550|miRNA|rno-mir-125b-1|rno-mir-125b-1 [Source:miRBase;Acc:MI0000896] ## {MIR: rno-mir-125b-1} #humanZ19p85 chromosome:11:121475664:121475768:-1 Same_strand|Boundary_non-coding|ENST00000385236|ENSG00000207971|miRNA|hsa-mir-125b-1 [Source:miRBase;Acc:MI0000446] ## {MIR: hsa-mir-125b-1} #mouseZ24p85 chromosome:9:41389999:41390107:1 Same_strand|Intronic_coding|ENSMUST00000098868|ENSMUSG00000074415|protein_coding|RIKEN cDNA 2610203C20 gene Gene [Source:MGI Symbol;Acc:MGI:1917705] ## Same_strand|Boundary_non-coding|ENSMUST00000083572|ENSMUSG00000065506|miRNA|mmu-mir-125b-1 [Source:miRBase;Acc:MI0000725] ## {MIR: mmu-mir-125b-1} ========== sblock12126 (miRBase rno-mir-191) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK] ========== #randfold sblock12126: 0.001 randfold humanZ20p85_sblock12126: 0.001 randfold mouseZ25p85_sblock12126: 0.001 #forester humanZ20p85_sblock12126: 0.949588 forester mouseZ25p85_sblock12126: 1 #identity: 98.14 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT3S1 19 34395 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT3S1 21 30173 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT3S1 22 26298 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT3S2 19 18165 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT3S1 20 16432 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT1S1 22 15001 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT3S2 21 14965 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT1S1 19 14026 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT1S1 21 13755 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT3S2 22 12765 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT3S1 18 12461 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT1S2 19 12454 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT4S2 19 11300 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT1S2 21 10721 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT1S2 22 10414 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT5S1 22 9245 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT2S2 19 8939 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT4S2 21 8442 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT5S1 19 8148 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT4S2 22 7994 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT3S2 20 7741 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT2S1 19 7569 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT3S2 18 7251 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT5S1 21 6888 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT1S1 20 6847 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT5S2 19 6488 sblock12126 CAACGGAATCCCAAAAGCA #rat_gr265496_libT4S1 19 6413 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT4S1 22 6079 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT5S2 21 5714 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT4S1 21 5073 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT1S2 20 4874 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT5S2 22 4684 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT1S1 18 4683 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT4S2 20 4439 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT2S2 21 4416 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT2S2 20 4177 sblock12126 CAACGGAATCCCAAAAGCAGC #rat_gr265498_libT2S1 21 4137 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT1S2 18 4106 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT5S1 20 3914 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT2S1 22 3873 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT2S1 20 3778 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT4S2 18 3634 sblock12126 CAACGGAATCCCAAAAGCAGCT #rat_gr265499_libT2S2 22 3354 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT2S2 18 3326 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT5S1 18 3074 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT5S2 20 3073 sblock12126 CAACGGAATCCCAAAAGCAG #rat_gr265497_libT4S1 20 2790 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT2S1 18 2555 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT5S2 18 2007 sblock12126 CAACGGAATCCCAAAAGC #rat_gr265495_libT4S1 18 1830 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT3S1 18 1294 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT3S1 20 755 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT3S2 18 742 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT3S1 23 605 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT3S1 19 604 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT3S1 21 486 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT2S2 18 392 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT3S2 20 377 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT4S2 18 373 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT3S1 24 326 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT3S2 23 317 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT2S2 23 290 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT3S2 21 272 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT1S2 18 265 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT3S2 19 263 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT1S1 18 255 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT2S1 18 253 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT4S2 23 239 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT2S1 23 237 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT4S1 18 237 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT1S1 23 225 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT5S1 18 204 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT1S1 20 198 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT1S1 21 189 sblock12126 AACGGAATCCCAAAAGCA #rat_gr36545_libT5S2 18 185 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT4S2 20 184 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT1S2 23 175 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT4S2 19 173 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT5S2 23 171 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT1S2 20 169 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT2S2 19 164 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT1S1 19 148 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT2S1 19 145 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT2S2 24 143 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT5S1 20 137 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT2S2 20 134 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT4S2 21 134 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT2S1 20 131 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT5S1 19 120 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT4S1 20 116 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT1S2 21 111 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT5S1 21 109 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT1S2 19 106 sblock12126 AACGGAATCCCAAAAGCAGC #rat_gr36547_libT5S2 20 104 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT4S1 21 103 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT3S2 24 102 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT5S1 23 99 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT1S1 24 99 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT3S1 22 96 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT4S1 19 95 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT5S2 24 87 sblock12126 AACGGAATCCCAAAAGCAG #rat_gr36546_libT5S2 19 86 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT2S1 24 82 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT5S2 21 77 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT2S2 21 68 sblock12126 AACGGAATCCCAAAAGCAGCT #rat_gr36548_libT2S1 21 63 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT3S1 23 61 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT4S2 24 60 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT5S1 24 59 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT1S2 24 57 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libT4S1 23 46 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT3S2 22 44 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT2S2 22 30 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT2S1 22 29 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT4S2 22 29 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT3S2 23 19 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT3S1 25 18 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT2S2 25 15 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT1S1 22 15 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT5S2 22 15 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT3S1 20 14 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT3S1 22 14 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT2S1 23 14 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT3S1 20 13 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT5S1 22 12 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT3S1 19 12 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT1S1 23 11 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT2S2 23 11 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT3S1 23 9 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT1S2 22 9 sblock12126 GCAACGGAATCCCAAAAG #rat_gr526916_libT3S1 18 8 sblock12126 AACGGAATCCCAAAAGCAGCTG #rat_gr36549_libT4S1 22 8 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT4S2 20 7 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT3S2 25 7 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT1S1 20 7 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT3S2 21 6 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT3S2 23 6 sblock12126 CAACGGAATCCCAAAAGCAGCTGT #rat_gr265501_libT4S1 24 6 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT5S1 23 6 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT1S1 20 5 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT3S2 20 5 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT4S1 20 5 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT4S2 21 5 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT4S2 23 5 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT3S1 24 5 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT3S2 19 5 sblock12126 GCAACGGAATCCCAAAAG #rat_gr526916_libT3S2 18 4 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT1S2 19 4 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT4S1 19 4 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT2S1 22 4 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT1S2 23 4 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT1S1 19 4 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT2S1 19 4 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT3S1 19 3 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT5S2 19 3 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT1S2 20 3 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT2S1 20 3 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT5S1 20 3 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT3S1 21 3 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT1S2 22 3 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT5S1 22 3 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT1S1 23 3 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT1S1 25 3 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT2S1 25 3 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT4S2 25 3 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT5S1 25 3 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT5S2 23 3 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT2S1 24 3 sblock12126 ACGGAATCCCAAAAGCAG #rat_gr112708_libT3S1 18 3 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT4S2 19 3 sblock12126 GGCAACGGAATCCCAAAAG #rat_gr592303_libT4S2 19 2 sblock12126 GGCAACGGAATCCCAAAAGCA #rat_gr592304_libT4S1 21 2 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT1S1 19 2 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT2S2 19 2 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT5S1 19 2 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT1S1 21 2 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT1S2 21 2 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT2S2 21 2 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT1S1 22 2 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT3S2 22 2 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT4S2 22 2 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT4S1 23 2 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT1S2 25 2 sblock12126 CAACGGAATCCCAAAAGCAGCTGTT #rat_gr265502_libT5S2 25 2 sblock12126 CAACGGAATCCCAAAAGCAGCTGTTG #rat_gr265503_libT3S1 26 2 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT1S2 24 2 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT2S2 24 2 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT3S2 24 2 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT1S2 19 2 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT5S1 19 2 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT5S2 19 2 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT4S1 20 2 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT5S1 20 2 sblock12126 ACGGAATCCCAAAAGCAGCTG #rat_gr112711_libT2S1 21 2 sblock12126 ACGGAATCCCAAAAGCAGCTG #rat_gr112711_libT3S1 21 2 sblock12126 ACGGAATCCCAAAAGCAGCTGT #rat_gr112712_libT3S1 22 2 sblock12126 ACGGAATCCCAAAAGCAGCTGT #rat_gr112712_libT5S2 22 2 sblock12126 GGAATCCCAAAAGCAGCT #rat_gr583490_libT1S1 18 2 sblock12126 GAATCCCAAAAGCAGCTG #rat_gr489463_libT2S1 18 2 sblock12126 GGGCAACGGAATCCCAAAAG #rat_gr605831_libT2S2 20 1 sblock12126 GGCAACGGAATCCCAAAAG #rat_gr592303_libT3S1 19 1 sblock12126 GGCAACGGAATCCCAAAAGCA #rat_gr592304_libT2S2 21 1 sblock12126 GCAACGGAATCCCAAAAG #rat_gr526916_libT2S2 18 1 sblock12126 GCAACGGAATCCCAAAAGC #rat_gr526917_libT3S2 19 1 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT2S2 20 1 sblock12126 GCAACGGAATCCCAAAAGCA #rat_gr526918_libT5S2 20 1 sblock12126 GCAACGGAATCCCAAAAGCAG #rat_gr526919_libT5S2 21 1 sblock12126 GCAACGGAATCCCAAAAGCAGC #rat_gr526920_libT4S1 22 1 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT5S1 23 1 sblock12126 GCAACGGAATCCCAAAAGCAGCT #rat_gr526921_libT5S2 23 1 sblock12126 CAACGGAATCCCAAAAGCAGCTG #rat_gr265500_libMirbase_rno-miR-191 23 1 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT1S2 23 1 sblock12126 AACGGAATCCCAAAAGCAGCTGT #rat_gr36550_libT4S1 23 1 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT1S1 24 1 sblock12126 AACGGAATCCCAAAAGCAGCTGTT #rat_gr36551_libT4S2 24 1 sblock12126 AACGGAATCCCAAAAGCAGCTGTTG #rat_gr36552_libT3S1 25 1 sblock12126 ACGGAATCCCAAAAGCAG #rat_gr112708_libT1S1 18 1 sblock12126 ACGGAATCCCAAAAGCAG #rat_gr112708_libT1S2 18 1 sblock12126 ACGGAATCCCAAAAGCAG #rat_gr112708_libT3S2 18 1 sblock12126 ACGGAATCCCAAAAGCAG #rat_gr112708_libT4S2 18 1 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT2S2 19 1 sblock12126 ACGGAATCCCAAAAGCAGC #rat_gr112709_libT4S1 19 1 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT1S2 20 1 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT2S1 20 1 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT2S2 20 1 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT3S2 20 1 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT4S2 20 1 sblock12126 ACGGAATCCCAAAAGCAGCT #rat_gr112710_libT5S2 20 1 sblock12126 ACGGAATCCCAAAAGCAGCTG #rat_gr112711_libT3S2 21 1 sblock12126 ACGGAATCCCAAAAGCAGCTG #rat_gr112711_libT4S1 21 1 sblock12126 ACGGAATCCCAAAAGCAGCTGT #rat_gr112712_libT1S2 22 1 sblock12126 CGGAATCCCAAAAGCAGC #rat_gr396537_libT1S1 18 1 sblock12126 CGGAATCCCAAAAGCAGC #rat_gr396537_libT3S1 18 1 sblock12126 CGGAATCCCAAAAGCAGC #rat_gr396537_libT3S2 18 1 sblock12126 CGGAATCCCAAAAGCAGCT #rat_gr396538_libT1S1 19 1 sblock12126 CGGAATCCCAAAAGCAGCT #rat_gr396538_libT1S2 19 1 sblock12126 CGGAATCCCAAAAGCAGCT #rat_gr396538_libT5S2 19 1 sblock12126 CGGAATCCCAAAAGCAGCTG #rat_gr396539_libT1S1 20 1 sblock12126 CGGAATCCCAAAAGCAGCTGT #rat_gr396540_libT2S2 21 1 sblock12126 GGAATCCCAAAAGCAGCT #rat_gr583490_libT5S2 18 1 sblock12126 GAATCCCAAAAGCAGCTG #rat_gr489463_libT4S2 18 1 sblock12126 ATCCCAAAAGCAGCTGTT #rat_gr219084_libT3S1 18 1 sblock12126 GTTGTCTCCAGAGCATTCCAGC #rat_gr662443_libT1S2 22 1 sblock12126 GTTGTCTCCAGAGCATTCCAGC #rat_gr662443_libT3S2 22 1 sblock12126 TTGTCTCCAGAGCATTCC #rat_gr1149194_libT1S2 18 1 sblock12126 TTGTCTCCAGAGCATTCCA #rat_gr1149195_libT3S1 19 1 sblock12126 TTGTCTCCAGAGCATTCCA #rat_gr1149195_libT3S2 19 1 sblock12126 TTGTCTCCAGAGCATTCCAG #rat_gr1149196_libT1S2 20 1 sblock12126 TTGTCTCCAGAGCATTCCAGC #rat_gr1149197_libT1S2 21 1 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT3S1 18 23 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT3S2 22 20 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT1S1 21 18 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT3S2 21 17 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT3S2 18 15 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT3S1 20 13 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT3S1 21 12 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT1S2 18 11 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT1S2 21 11 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT3S1 22 10 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT2S2 18 9 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT1S1 22 9 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT1S1 18 9 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT1S2 22 8 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT5S2 21 8 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT5S2 18 7 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT5S1 22 7 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT5S2 22 7 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT1S1 18 6 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT4S2 18 6 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT4S2 20 6 sblock12126 GCTGCACTTGGATTTCGTTCC #rat_gr572155_libT3S2 21 6 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT3S1 18 6 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT3S1 19 6 sblock12126 CTGCACTTGGATTTCGTTCC #rat_gr441525_libT3S1 20 6 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT5S1 18 5 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT3S2 20 5 sblock12126 GCTGCACTTGGATTTCGTTCC #rat_gr572155_libT3S1 21 5 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT1S1 19 5 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT2S1 21 5 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT2S1 18 4 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT4S1 20 4 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT5S2 20 4 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT2S1 22 4 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT1S2 19 4 sblock12126 AGCTGCACTTGGATTTCG #rat_gr165692_libT1S1 18 3 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT1S2 19 3 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT1S1 20 3 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT1S2 20 3 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT2S1 20 3 sblock12126 GCTGCACTTGGATTTCGTTCC #rat_gr572155_libT1S1 21 3 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT2S2 22 3 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT4S2 22 3 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT3S2 18 3 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT2S1 19 3 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT5S1 21 3 sblock12126 CTGCACTTGGATTTCGTTCCCT #rat_gr441527_libT2S2 22 3 sblock12126 AGCTGCACTTGGATTTCGT #rat_gr165693_libT3S1 19 2 sblock12126 AGCTGCACTTGGATTTCGTTC #rat_gr165694_libT3S2 21 2 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT1S1 19 2 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT3S1 19 2 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT3S2 19 2 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT4S1 19 2 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT5S1 19 2 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT2S2 20 2 sblock12126 GCTGCACTTGGATTTCGTTCCC #rat_gr572156_libT4S1 22 2 sblock12126 GCTGCACTTGGATTTCGTTCCCT #rat_gr572157_libT5S2 23 2 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT5S2 18 2 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT2S2 19 2 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT3S2 19 2 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT5S1 19 2 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT2S2 21 2 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT4S2 21 2 sblock12126 CTGCACTTGGATTTCGTTCCCT #rat_gr441527_libT1S2 22 2 sblock12126 CTGCACTTGGATTTCGTTCCCT #rat_gr441527_libT3S1 22 2 sblock12126 TGCACTTGGATTTCGTTC #rat_gr960956_libT3S1 18 2 sblock12126 TGCACTTGGATTTCGTTCC #rat_gr960957_libT4S2 19 2 sblock12126 AGCTGCACTTGGATTTCG #rat_gr165692_libT3S1 18 1 sblock12126 AGCTGCACTTGGATTTCGT #rat_gr165693_libT5S1 19 1 sblock12126 AGCTGCACTTGGATTTCGT #rat_gr165693_libT5S2 19 1 sblock12126 AGCTGCACTTGGATTTCGTTCC #rat_gr165695_libT3S1 22 1 sblock12126 AGCTGCACTTGGATTTCGTTCCC #rat_gr165696_libT1S1 23 1 sblock12126 AGCTGCACTTGGATTTCGTTCCC #rat_gr165696_libT4S1 23 1 sblock12126 GCTGCACTTGGATTTCGT #rat_gr572152_libT4S1 18 1 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT2S2 19 1 sblock12126 GCTGCACTTGGATTTCGTT #rat_gr572153_libT5S2 19 1 sblock12126 GCTGCACTTGGATTTCGTTC #rat_gr572154_libT5S1 20 1 sblock12126 GCTGCACTTGGATTTCGTTCC #rat_gr572155_libT1S2 21 1 sblock12126 GCTGCACTTGGATTTCGTTCC #rat_gr572155_libT2S1 21 1 sblock12126 GCTGCACTTGGATTTCGTTCC #rat_gr572155_libT4S2 21 1 sblock12126 GCTGCACTTGGATTTCGTTCCCT #rat_gr572157_libT2S1 23 1 sblock12126 GCTGCACTTGGATTTCGTTCCCT #rat_gr572157_libT3S1 23 1 sblock12126 GCTGCACTTGGATTTCGTTCCCT #rat_gr572157_libT3S2 23 1 sblock12126 GCTGCACTTGGATTTCGTTCCCT #rat_gr572157_libT4S2 23 1 sblock12126 GCTGCACTTGGATTTCGTTCCCT #rat_gr572157_libT5S1 23 1 sblock12126 GCTGCACTTGGATTTCGTTCCCTG #rat_gr572158_libT4S2 24 1 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT1S2 18 1 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT4S1 18 1 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT4S2 18 1 sblock12126 CTGCACTTGGATTTCGTT #rat_gr441523_libT5S1 18 1 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT4S1 19 1 sblock12126 CTGCACTTGGATTTCGTTC #rat_gr441524_libT5S2 19 1 sblock12126 CTGCACTTGGATTTCGTTCC #rat_gr441525_libT1S1 20 1 sblock12126 CTGCACTTGGATTTCGTTCC #rat_gr441525_libT1S2 20 1 sblock12126 CTGCACTTGGATTTCGTTCC #rat_gr441525_libT4S2 20 1 sblock12126 CTGCACTTGGATTTCGTTCCC #rat_gr441526_libT4S1 21 1 sblock12126 CTGCACTTGGATTTCGTTCCCT #rat_gr441527_libT1S1 22 1 sblock12126 CTGCACTTGGATTTCGTTCCCT #rat_gr441527_libT3S2 22 1 sblock12126 CTGCACTTGGATTTCGTTCCCT #rat_gr441527_libT5S2 22 1 sblock12126 CTGCACTTGGATTTCGTTCCCTG #rat_gr441528_libT5S2 23 1 sblock12126 TGCACTTGGATTTCGTTC #rat_gr960956_libT2S2 18 1 sblock12126 TGCACTTGGATTTCGTTCCC #rat_gr960958_libT3S1 20 1 sblock12126 TGCACTTGGATTTCGTTCCCT #rat_gr960959_libT1S1 21 1 sblock12126 TGCACTTGGATTTCGTTCCCT #rat_gr960959_libT2S1 21 1 sblock12126 TCGTTCCCTGCTCTCCTG #rat_gr891789_libT2S2 18 1 sblock12126 -------------------GGCTGGACAGCGGGCAACGGAATCCCAAAAGCAGCTGTTGTCTCCAGAGCATTCCAGCTGCACTTGGATTTCGTTCCCTGCTCTCCTGCCT--------------- humanZ20p85 ---------------------------------CAACGGAATCCCAAAAGCAGCTGTTGTCTCCAGAGCATTCCAGCTGCGCTTGGATTTCGTCC------------------------------ mouseZ25p85 GCAAGAGCCCTCCTCCAATGGCTGGACAGCGGGCAACGGAATCCCAAAAGCAGCTGTTGTCTCCAGAGCATTCCAGCTGCACTTGGATTTCGTTCCCTGCTCTCCTGCCTGAGCAGCGCCCTGGC *********************************************** ************ * sblock12126 ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... #ENSRNOT00000053579 ENSRNOG00000035456 rno-mir-191 sblock12126 (((.(((.((((((.((((((((((.((..(((((((..((((....)).))..)))))))..)))))))))))).)))))).))).))). 1.000 -48.90 # humanZ20p85 ..(((((((.((((..(((((((..((((....)).))..)))))))..))))))))))).. 1.000 -26.20 # mouseZ25p85 ((.((.((.((.(((....(((.(((.((((((.((((((((.((((..(((((((..((((....)).))..)))))))..)))))))))))).)))))).))).))).))).)).)).)).)) 0.999 -57.60 # #sblock12126 chromosome:8:113614360:113614450:1 Same_strand|Exonic_non-coding|ENSRNOT00000053579|ENSRNOG00000035456 ## Same_strand|Boundary_non-coding|ENSRNOT00000053579|ENSRNOG00000035456 ## ENSRNOG00000035456|miRNA|rno-mir-191|rno-mir-191 [Source:miRBase;Acc:MI0000934] ## {MIR: rno-mir-191} #humanZ20p85 chromosome:3:49033035:49033165:-1 Same_strand|Boundary_non-coding|ENST00000395462|ENSG00000178149|protein_coding|DALR anticodon-binding domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5D0E6] ## Same_strand|Intronic_non-coding|ENST00000313778|ENSG00000178149|protein_coding|DALR anticodon-binding domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5D0E6] ## Opposite_strand|Intronic_non-coding|ENST00000326912|ENSG00000178057|protein_coding|Uncharacterized protein C3orf60 [Source:UniProtKB/Swiss-Prot;Acc:Q9BU61] ## Opposite_strand|Boundary_non-coding|ENST00000395458|ENSG00000178057|protein_coding|Uncharacterized protein C3orf60 [Source:UniProtKB/Swiss-Prot;Acc:Q9BU61] ## {SimpF: oe = 0.78 0 CpG,rank = 2 1 FirstEF,rank = 4 1 FirstEF} ## {MIR: hsa-mir-191} #mouseZ25p85 chromosome:9:108470623:108470747:1 Same_strand|Boundary_non-coding|ENSMUST00000083681|ENSMUSG00000065615|miRNA|mmu-mir-191 [Source:miRBase;Acc:MI0000233] ## {MIR: mmu-mir-191} ========== sblock12127 (miRBase rno-mir-425) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK] ========== #randfold sblock12127: 0.014 randfold humanZ21p85_sblock12127: 0.012 randfold mouseZ26p85_sblock12127: 0.006 #forester humanZ21p85_sblock12127: 0.913553 forester mouseZ26p85_sblock12127: 0.936566 #identity: 97.81 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT3S1 18 1843 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT3S1 19 1727 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT3S2 18 1681 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT3S1 23 1632 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT3S2 19 1469 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT3S1 20 1216 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT3S2 23 1134 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT3S2 20 976 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT3S1 22 639 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT1S1 18 544 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT5S2 18 519 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT1S1 23 481 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT5S2 23 469 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT5S1 23 454 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT5S1 18 447 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT1S2 23 427 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT1S2 18 424 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT3S2 22 404 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT5S2 19 387 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT1S1 19 382 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT3S1 21 377 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT3S2 21 361 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT1S1 20 353 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT4S2 18 318 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT5S2 20 309 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT1S2 19 306 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT2S2 18 282 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT1S2 20 269 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT5S1 19 248 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT5S1 20 232 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT4S2 23 231 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT2S2 19 213 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT4S2 19 203 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT2S2 23 196 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT4S1 18 181 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT4S2 20 178 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT3S2 24 174 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT4S1 23 170 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT5S2 22 167 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT1S1 22 166 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT2S1 19 164 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT2S2 20 164 sblock12127 AATGACACGATCACTCCC #rat_gr62192_libT2S1 18 148 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT1S2 22 147 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT3S1 24 147 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT5S1 22 138 sblock12127 AATGACACGATCACTCCCG #rat_gr62193_libT4S1 19 131 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT4S1 20 121 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT1S1 21 117 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT1S2 21 113 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT4S2 22 102 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT5S1 21 92 sblock12127 AATGACACGATCACTCCCGT #rat_gr62194_libT2S1 20 91 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT5S2 21 83 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT2S2 22 80 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT4S2 21 76 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT5S2 24 66 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libT2S1 23 62 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT2S2 21 59 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT4S1 22 50 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT3S1 25 39 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT3S2 25 39 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT5S1 24 37 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT1S1 24 34 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT3S1 22 34 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT4S2 24 29 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT4S1 21 27 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT1S2 24 27 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT2S2 24 27 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT3S1 18 25 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT5S2 25 22 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT3S2 22 22 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT5S2 18 21 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT3S1 19 21 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT5S2 22 20 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT1S2 25 16 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT5S2 19 16 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT5S1 22 16 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT3S2 18 15 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT1S2 22 15 sblock12127 AATGACACGATCACTCCCGTT #rat_gr62195_libT2S1 21 14 sblock12127 AATGACACGATCACTCCCGTTG #rat_gr62196_libT2S1 22 12 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT5S1 25 12 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT3S2 19 12 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT1S1 18 11 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT2S2 25 10 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT1S1 25 9 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT5S1 18 9 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT5S1 19 9 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT3S1 20 9 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT3S1 23 9 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT3S2 23 9 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT5S1 23 9 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT2S1 24 8 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT1S2 19 8 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT2S2 22 8 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT4S2 22 8 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT5S2 23 8 sblock12127 AATGACACGATCACTCCCGTTGAG #rat_gr62198_libT4S1 24 7 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT4S1 18 7 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT4S2 18 7 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT4S2 19 7 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT3S1 21 7 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT4S1 22 7 sblock12127 ATGACACGATCACTCCCGTTGAGT #rat_gr226971_libT5S2 24 7 sblock12127 TGACACGATCACTCCCGT #rat_gr931842_libT3S2 18 7 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT1S2 18 6 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT5S2 21 6 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT1S1 22 5 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT4S1 25 4 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT1S1 19 4 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT4S2 20 4 sblock12127 ATGACACGATCACTCCCGTTGAGT #rat_gr226971_libT1S1 24 4 sblock12127 ATGACACGATCACTCCCGTTGAGT #rat_gr226971_libT3S2 24 4 sblock12127 TGACACGATCACTCCCGTTGA #rat_gr931845_libT5S2 21 4 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT2S2 18 3 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT4S1 19 3 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT5S1 20 3 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT5S1 21 3 sblock12127 ATGACACGATCACTCCCGTTGA #rat_gr226969_libT2S1 22 3 sblock12127 ATGACACGATCACTCCCGTTGAGT #rat_gr226971_libT5S1 24 3 sblock12127 TGACACGATCACTCCCGTTG #rat_gr931844_libT3S1 20 3 sblock12127 GACACGATCACTCCCGTT #rat_gr492645_libT1S2 18 3 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT2S1 25 2 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT1S2 20 2 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT5S2 20 2 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT1S1 21 2 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT4S2 21 2 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT1S2 23 2 sblock12127 TGACACGATCACTCCCGT #rat_gr931842_libT2S2 18 2 sblock12127 TGACACGATCACTCCCGTTG #rat_gr931844_libT3S2 20 2 sblock12127 TGACACGATCACTCCCGTTGA #rat_gr931845_libT3S1 21 2 sblock12127 TGACACGATCACTCCCGTTGA #rat_gr931845_libT3S2 21 2 sblock12127 TGACACGATCACTCCCGTTGAG #rat_gr931846_libT3S1 22 2 sblock12127 TGACACGATCACTCCCGTTGAG #rat_gr931846_libT3S2 22 2 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT3S2 23 2 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT4S2 23 2 sblock12127 GACACGATCACTCCCGTTG #rat_gr492646_libT3S2 19 2 sblock12127 GACACGATCACTCCCGTTGAGT #rat_gr492649_libT5S2 22 2 sblock12127 ACACGATCACTCCCGTTGAGTG #rat_gr74725_libT2S1 22 2 sblock12127 GAATGACACGATCACTCCC #rat_gr489820_libT3S1 19 1 sblock12127 GAATGACACGATCACTCCC #rat_gr489820_libT5S2 19 1 sblock12127 AATGACACGATCACTCCCGTTGA #rat_gr62197_libMirbase_rno-miR-425 23 1 sblock12127 AATGACACGATCACTCCCGTTGAGT #rat_gr62199_libT4S2 25 1 sblock12127 ATGACACGATCACTCCCG #rat_gr226965_libT2S1 18 1 sblock12127 ATGACACGATCACTCCCGT #rat_gr226966_libT2S2 19 1 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT1S1 20 1 sblock12127 ATGACACGATCACTCCCGTT #rat_gr226967_libT3S2 20 1 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT1S2 21 1 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT3S2 21 1 sblock12127 ATGACACGATCACTCCCGTTG #rat_gr226968_libT4S1 21 1 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT2S2 23 1 sblock12127 ATGACACGATCACTCCCGTTGAG #rat_gr226970_libT4S1 23 1 sblock12127 ATGACACGATCACTCCCGTTGAGT #rat_gr226971_libT3S1 24 1 sblock12127 ATGACACGATCACTCCCGTTGAGT #rat_gr226971_libT4S2 24 1 sblock12127 TGACACGATCACTCCCGT #rat_gr931842_libT2S1 18 1 sblock12127 TGACACGATCACTCCCGT #rat_gr931842_libT4S2 18 1 sblock12127 TGACACGATCACTCCCGT #rat_gr931842_libT5S2 18 1 sblock12127 TGACACGATCACTCCCGTT #rat_gr931843_libT4S2 19 1 sblock12127 TGACACGATCACTCCCGTTGA #rat_gr931845_libT1S1 21 1 sblock12127 TGACACGATCACTCCCGTTGA #rat_gr931845_libT4S1 21 1 sblock12127 TGACACGATCACTCCCGTTGAG #rat_gr931846_libT5S1 22 1 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT1S2 23 1 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT2S2 23 1 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT3S1 23 1 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT5S1 23 1 sblock12127 TGACACGATCACTCCCGTTGAGT #rat_gr931847_libT5S2 23 1 sblock12127 GACACGATCACTCCCGTT #rat_gr492645_libT3S2 18 1 sblock12127 GACACGATCACTCCCGTTG #rat_gr492646_libT1S2 19 1 sblock12127 GACACGATCACTCCCGTTG #rat_gr492646_libT3S1 19 1 sblock12127 GACACGATCACTCCCGTTGA #rat_gr492647_libT5S2 20 1 sblock12127 GACACGATCACTCCCGTTGAG #rat_gr492648_libT3S2 21 1 sblock12127 GACACGATCACTCCCGTTGAG #rat_gr492648_libT5S1 21 1 sblock12127 GACACGATCACTCCCGTTGAGT #rat_gr492649_libT4S1 22 1 sblock12127 GACACGATCACTCCCGTTGAGT #rat_gr492649_libT5S1 22 1 sblock12127 ACACGATCACTCCCGTTG #rat_gr74724_libT2S2 18 1 sblock12127 CGATCACTCCCGTTGAGT #rat_gr390783_libT3S1 18 1 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT1S1 18 60 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT3S1 19 50 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT1S1 19 41 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT5S2 18 40 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT3S2 19 38 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT3S1 19 36 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT1S2 18 35 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT3S2 18 34 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT3S1 18 33 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT1S1 19 31 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT1S1 22 30 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT5S1 18 28 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT3S2 19 28 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT3S1 22 27 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT1S2 19 25 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT5S2 19 24 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT5S2 22 22 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT5S1 19 21 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT3S2 18 19 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT3S1 18 18 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT1S2 19 18 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT2S2 19 18 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT4S2 18 18 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT3S2 22 18 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT5S1 22 18 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT1S1 21 17 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT2S1 19 16 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT5S2 19 15 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT4S1 18 15 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT2S1 19 15 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT2S2 19 15 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT4S1 19 15 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT4S2 19 14 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT5S1 19 14 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT3S1 21 14 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT1S2 22 14 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT3S2 21 13 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT3S2 21 13 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT3S1 21 12 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT3S1 19 11 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT3S2 19 11 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT2S2 18 11 sblock12127 ATCGGGAATATCGTGTCCG #rat_gr222924_libT4S2 19 11 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT1S2 21 10 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT1S2 18 9 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT1S1 20 9 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT3S1 20 8 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT3S2 20 8 sblock12127 CATCGGGAATATCGTGTCCG #rat_gr310432_libT3S1 20 8 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT3S1 22 8 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT3S2 22 8 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT5S1 21 8 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT4S2 22 8 sblock12127 CCATCGGGAATATCGTGT #rat_gr336599_libT3S2 18 7 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT5S1 19 7 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT3S1 21 7 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT5S2 20 7 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT1S1 20 6 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT3S2 21 6 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT3S1 20 6 sblock12127 ATCGGGAATATCGTGTCCGCCCA #rat_gr222928_libT1S1 23 6 sblock12127 TCGGGAATATCGTGTCCGCCC #rat_gr890400_libT1S1 21 6 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT1S2 21 5 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT5S1 21 5 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT2S2 18 5 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT5S2 18 5 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT1S2 22 5 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT1S2 23 5 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT3S1 23 5 sblock12127 ATCGGGAATATCGTGTCC #rat_gr222923_libT2S1 18 5 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT5S1 20 5 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT2S2 21 5 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT5S2 21 5 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT2S1 22 5 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT2S2 22 5 sblock12127 CCATCGGGAATATCGTGT #rat_gr336599_libT3S1 18 4 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT5S2 20 4 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT5S2 21 4 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT3S1 23 4 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT1S1 18 4 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT4S2 18 4 sblock12127 CATCGGGAATATCGTGTCC #rat_gr310431_libT4S1 19 4 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT5S2 23 4 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT2S1 21 4 sblock12127 TCGGGAATATCGTGTCCGCCC #rat_gr890400_libT4S1 21 4 sblock12127 CCATCGGGAATATCGTGT #rat_gr336599_libT1S2 18 3 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT5S2 19 3 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT1S2 20 3 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT2S1 20 3 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT1S1 21 3 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT2S1 21 3 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT2S2 21 3 sblock12127 CCATCGGGAATATCGTGTCCGC #rat_gr336603_libT3S1 22 3 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT1S1 23 3 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT2S1 18 3 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT5S1 18 3 sblock12127 CATCGGGAATATCGTGTCCG #rat_gr310432_libT5S2 20 3 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT5S2 21 3 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT5S1 22 3 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT2S2 23 3 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT5S1 23 3 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT3S2 20 3 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT4S2 21 3 sblock12127 ATCGGGAATATCGTGTCCGCCC #rat_gr222927_libT4S1 22 3 sblock12127 ATCGGGAATATCGTGTCCGCCCA #rat_gr222928_libT5S2 23 3 sblock12127 TCGGGAATATCGTGTCCGC #rat_gr890398_libT1S1 19 3 sblock12127 TCGGGAATATCGTGTCCGC #rat_gr890398_libT4S2 19 3 sblock12127 TCGGGAATATCGTGTCCGCCC #rat_gr890400_libT3S1 21 3 sblock12127 TCGGGAATATCGTGTCCGCCCA #rat_gr890401_libT3S2 22 3 sblock12127 TCGGGAATATCGTGTCCGCCCA #rat_gr890401_libT5S2 22 3 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT1S1 19 2 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT1S2 19 2 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT4S2 19 2 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT2S2 20 2 sblock12127 CCATCGGGAATATCGTGTCC #rat_gr336601_libT5S1 20 2 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT4S1 21 2 sblock12127 CCATCGGGAATATCGTGTCCGC #rat_gr336603_libT1S1 22 2 sblock12127 CCATCGGGAATATCGTGTCCGC #rat_gr336603_libT1S2 22 2 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT4S2 23 2 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT5S1 23 2 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT5S2 23 2 sblock12127 CATCGGGAATATCGTGTCCG #rat_gr310432_libT1S1 20 2 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT4S1 21 2 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT1S1 22 2 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT5S2 22 2 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT1S1 23 2 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT2S1 20 2 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT4S2 20 2 sblock12127 ATCGGGAATATCGTGTCCGCC #rat_gr222926_libT4S1 21 2 sblock12127 TCGGGAATATCGTGTCCG #rat_gr890397_libT3S1 18 2 sblock12127 TCGGGAATATCGTGTCCGC #rat_gr890398_libT2S2 19 2 sblock12127 TCGGGAATATCGTGTCCGC #rat_gr890398_libT5S2 19 2 sblock12127 TCGGGAATATCGTGTCCGCC #rat_gr890399_libT3S2 20 2 sblock12127 CCATCGGGAATATCGTGT #rat_gr336599_libT5S1 18 1 sblock12127 CCATCGGGAATATCGTGT #rat_gr336599_libT5S2 18 1 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT2S2 19 1 sblock12127 CCATCGGGAATATCGTGTC #rat_gr336600_libT4S1 19 1 sblock12127 CCATCGGGAATATCGTGTCCG #rat_gr336602_libT4S2 21 1 sblock12127 CCATCGGGAATATCGTGTCCGC #rat_gr336603_libT2S2 22 1 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT1S2 23 1 sblock12127 CCATCGGGAATATCGTGTCCGCC #rat_gr336604_libT4S1 23 1 sblock12127 CCATCGGGAATATCGTGTCCGCCC #rat_gr336605_libT1S1 24 1 sblock12127 CCATCGGGAATATCGTGTCCGCCC #rat_gr336605_libT3S2 24 1 sblock12127 CATCGGGAATATCGTGTC #rat_gr310430_libT4S1 18 1 sblock12127 CATCGGGAATATCGTGTCCG #rat_gr310432_libT2S2 20 1 sblock12127 CATCGGGAATATCGTGTCCG #rat_gr310432_libT3S2 20 1 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT1S1 21 1 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT1S2 21 1 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT2S2 21 1 sblock12127 CATCGGGAATATCGTGTCCGC #rat_gr310433_libT4S2 21 1 sblock12127 CATCGGGAATATCGTGTCCGCC #rat_gr310434_libT4S1 22 1 sblock12127 CATCGGGAATATCGTGTCCGCCC #rat_gr310435_libT3S2 23 1 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT1S2 20 1 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT2S2 20 1 sblock12127 ATCGGGAATATCGTGTCCGC #rat_gr222925_libT4S1 20 1 sblock12127 ATCGGGAATATCGTGTCCGCCCA #rat_gr222928_libT1S2 23 1 sblock12127 ATCGGGAATATCGTGTCCGCCCA #rat_gr222928_libT3S1 23 1 sblock12127 ATCGGGAATATCGTGTCCGCCCA #rat_gr222928_libT3S2 23 1 sblock12127 ATCGGGAATATCGTGTCCGCCCA #rat_gr222928_libT5S1 23 1 sblock12127 TCGGGAATATCGTGTCCG #rat_gr890397_libT1S2 18 1 sblock12127 TCGGGAATATCGTGTCCG #rat_gr890397_libT4S1 18 1 sblock12127 TCGGGAATATCGTGTCCG #rat_gr890397_libT5S1 18 1 sblock12127