candidate miRBase miRNAs
miRNAknown_rep_cloningHIGH_multiarm_DicerOK_randfoldOK (4 loci)
rno-mir-374
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-374 5arm | 118 | 27 | 13 | 230 | 408 | 198 | 184 | 135 | 123 | 674 |
| rno-mir-374 3arm | 19 | 11 | 1 | 1 | 9 | 6 | 1 | 3 | 6 | 6 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-374 5arm | 0.004 | 0.001 | 0.001 | 0.014 | 0.020 | 0.015 | 0.014 | 0.007 | 0.008 | 0.045 |
| rno-mir-374 3arm | 0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
sblock12686 (miRBase rno-mir-374) [miRNAknown_rep_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-374 | 0.001 | no | LINE,LINE/L2 | 0.26/0.37 | 18/23/0.75 | 0.0 0.0 | 0.6 0.8 | 762 37 | 0 0 | 10 10 | 0 0 | 9 7 | 1 3 | 5arm_loop 3arm | 1 1 | nd nd | 0.09 0.11 | 1 1 | 2173 | 10 | 2 | 2 |
| Located in cluster 84: rno-mir-421, rno-mir-374 |
| reads | miRBase family seed | |||||||||||
| seed | ----------------------UAUAAUA------------------------------------------------------------------ | 2069 | miR-374 | |||||||||
| seed | ----------------------------------------------------UUAGCAC------------------------------------ | 58 | novel | |||||||||
| seed | ------------------------UAAUACA---------------------------------------------------------------- | 31 | novel | |||||||||
| seed | -------------------------AAUACAA--------------------------------------------------------------- | 8 | novel | |||||||||
| seed | ------------------------------------------------------AGCACGU---------------------------------- | 3 | novel | |||||||||
| seed | -----------------------------------------------------UAGCACG----------------------------------- | 2 | novel | |||||||||
| seed | -----------------------AUAAUAC----------------------------------------------------------------- | 1 | miR-369 | |||||||||
| seed | --------------------GAUAUAA-------------------------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| rno-miR-374 | ---------------------ATATAATACAACCTGCTAAGTG---------------------------------------------------- | 22 | 26 | 2 | 3 | 94 | 153 | 46 | 69 | 32 | 20 | 304 |
| ---------------------ATATAATACAACCTGCTAAG------------------------------------------------------ | 20 | 44 | 10 | 2 | 57 | 94 | 83 | 44 | 51 | 50 | 117 | |
| ---------------------ATATAATACAACCTGCTA-------------------------------------------------------- | 18 | 13 | 4 | 1 | 28 | 60 | 27 | 27 | 20 | 21 | 78 | |
| ---------------------ATATAATACAACCTGCTAAGT----------------------------------------------------- | 21 | 15 | 5 | 1 | 17 | 46 | 17 | 18 | 11 | 9 | 91 | |
| ---------------------ATATAATACAACCTGCTAA------------------------------------------------------- | 19 | 13 | 4 | 5 | 24 | 38 | 13 | 16 | 11 | 18 | 66 | |
| ---------------------ATATAATACAACCTGCTAAGTGT--------------------------------------------------- | 23 | 2 | 1 | - | 7 | 12 | 2 | 6 | 8 | 1 | 12 | |
| ---------------------------------------------------CTTAGCACGTTGTATTATT------------------------- | 19 | 7 | 8 | - | - | 3 | 1 | - | - | 4 | 1 | |
| -----------------------ATAATACAACCTGCTAAGTG---------------------------------------------------- | 20 | 1 | 1 | 1 | 2 | 3 | 3 | 2 | 2 | 1 | 4 | |
| ---------------------------------------------------CTTAGCACGTTGTATTATTATT---------------------- | 22 | 4 | - | - | - | 4 | 2 | - | - | - | 2 | |
| ---------------------------------------------------CTTAGCACGTTGTATTATTA------------------------ | 20 | 3 | - | 1 | 1 | - | - | - | 1 | 1 | 2 | |
| ---------------------------------------------------CTTAGCACGTTGTATTAT-------------------------- | 18 | 4 | - | - | - | 1 | - | - | 1 | 1 | - | |
| ---------------------------------------------------CTTAGCACGTTGTATTATTAT----------------------- | 21 | - | 2 | - | - | - | 2 | 1 | - | - | 1 | |
| -----------------------ATAATACAACCTGCTAAG------------------------------------------------------ | 18 | - | - | - | - | - | 3 | - | - | 2 | - | |
| -----------------------ATAATACAACCTGCTAAGT----------------------------------------------------- | 19 | - | - | - | 1 | - | 1 | 1 | - | - | 1 | |
| ------------------------TAATACAACCTGCTAAGT----------------------------------------------------- | 18 | - | - | - | - | 1 | 2 | - | - | - | - | |
| -----------------------ATAATACAACCTGCTAAGTGT--------------------------------------------------- | 21 | - | - | - | - | - | - | 1 | - | 1 | - | |
| ----------------------------------------------------TTAGCACGTTGTATTATTA------------------------ | 19 | 1 | - | - | - | - | 1 | - | - | - | - | |
| ------------------------TAATACAACCTGCTAAGTG---------------------------------------------------- | 19 | 1 | - | - | - | 1 | - | - | - | - | - | |
| ------------------------TAATACAACCTGCTAAGTGT--------------------------------------------------- | 20 | 2 | - | - | - | - | - | - | - | - | - | |
| -------------------GGATATAATACAACCTGCT--------------------------------------------------------- | 19 | 1 | - | - | - | - | - | - | - | - | - | |
| -----------------------------------------------------TAGCACGTTGTATTATTAT----------------------- | 19 | - | - | - | - | - | - | - | 1 | - | - | |
| -----------------------------------------------------TAGCACGTTGTATTATTA------------------------ | 18 | - | - | - | - | 1 | - | - | - | - | - | |
| -----------------------------------------------------TAGCACGTTGTATTATTATTGTC------------------- | 23 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------TATAATACAACCTGCTAAGTG---------------------------------------------------- | 21 | - | - | - | - | - | - | - | - | - | 1 | |
| ------------------------TAATACAACCTGCTAAGTGTTC------------------------------------------------- | 22 | - | - | - | - | - | 1 | - | - | - | - | |
| rat | ------------CTCGGATGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCACGTTGTATTATTATTGTCCGAG--------------- | |||||||||||
| human | GAAGAAATCCTACTCGGATGGATATAATACAACCTGCTAAGTGTCCTAGCACTTAGCAGGTTGTATTATCATTGTCCGTGTCTATGGCTCTCGTC | |||||||||||
| mouse | GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCTCGTC | |||||||||||
| ***** ************************** ************* ********** ******** * | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000054666 ENSRNOG00000036562 rno-mir-374 | |||||||||||
| rat | ((((((..(..((((((((((.((((((((((....)))))))))).))))))))))..)..)))))) | 1.000 -37.90 | ||||||||||
| human | ...((...((.((.(((((((..(((((((((((((((((((((....)))))))))))))))))))))..))))))).))....))...))... | 0.969 -42.50 | ||||||||||
| mouse | ...((...((..(((((..((..(((((((((((((((((((((....)))))))))))))))))))))..))..))))).....))...))... | 0.965 -45.00 | ||||||||||
| rat | chromosome:X:91563572:91563639:-1 | Same_strand|Exonic_non-coding|ENSRNOT00000054666|ENSRNOG00000036562 ## ENSRNOG00000036562|miRNA|rno-mir-374|rno-mir-374 [Source:miRBase;Acc:MI0003552] ## {Repeats: L2 0 3378 1 class=LINE,L2 3102 3126 1 class=LINE/L2} ## {MIR: rno-mir-374} |
| human | chromosome:X:73355095:73355189:-1 | Same_strand|Boundary_non-coding|ENST00000390738|ENSG00000212027|miRNA|hsa-mir-374b [Source:miRBase;Acc:MI0005566] ## {Repeats: L2 1 class=LINE/L2} ## {MIR: hsa-mir-374b} |
| mouse | chromosome:X:100768399:100768493:-1 | Same_strand|Exonic_non-coding|ENSMUST00000102314|ENSMUSG00000076269|miRNA|mmu-mir-374 [Source:miRBase;Acc:MI0004125] ## {Repeats: L2 1 class=LINE/L2} ## {MIR: mmu-mir-374} |
rno-mir-325
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-325 5arm | 1096 | 571 | 1 | 1 | 1 | 2 | 5 | 3 | 5 | 4 |
| rno-mir-325 3arm | 227 | 227.500 | 1 | 0 | 1 | 1 | 0 | 1.500 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-325 5arm | 0.036 | 0.025 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| rno-mir-325 3arm | 0.008 | 0.010 | 0.000 | 0 | 0.000 | 0.000 | 0 | 0.000 | 0 | 0 |
sblock12692 (miRBase rno-mir-325) [miRNAknown_rep_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-325 | 0.001 | no | LINE,LINE/L2 | 0.26/0.50 | 18/24/0.70 | 0.0 0.0 0.0 | 1.3 0.0 0.8 | 1294 1 433 | 0 0 0 | 10 1 6 | 0 0 0 | 15 37 24 | 2 -16 5 | 5arm 5arm_loop_3arm 3arm | 1 1 2 | nd nd nd | 0.10 0.58 0.11 | 1 8 1 | 2219 | 10 | 3 | 1 |
| reads | miRBase family seed | |||||||||||
| seed | ------------------------------------CUAGUAG---------------------------------------------------------------------------------- | 1684 | miR-325 | |||||||||
| seed | --------------------------------------------------------------------------UUAUUGA-------------------------------------------- | 493 | miR-325 | |||||||||
| seed | ---------------------------------------------------------------------------UAUUGAG------------------------------------------- | 35 | novel | |||||||||
| seed | -------------------------------------UAGUAGG--------------------------------------------------------------------------------- | 3 | novel | |||||||||
| seed | -----------------------------------CCUAGUA----------------------------------------------------------------------------------- | 1 | novel | |||||||||
| seed | ----------------------------------------------------------UUGUGAC------------------------------------------------------------ | 1 | miR-758 | |||||||||
| seed | -----------------------------------------------------------------------------UUGAGCA----------------------------------------- | 1 | novel | |||||||||
| seed | ----------------------------------------------------------------------------AUUGAGC------------------------------------------ | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| -----------------------------------CCTAGTAGGTGCTCAGTAAGT--------------------------------------------------------------------- | 21 | 360 | 170 | - | - | - | 1 | 4 | - | - | 1 | |
| -----------------------------------CCTAGTAGGTGCTCAGTA------------------------------------------------------------------------ | 18 | 201 | 122 | - | - | 1 | 1 | - | - | 1 | 1 | |
| rno-miR-325-5p | -----------------------------------CCTAGTAGGTGCTCAGTAAGTGT------------------------------------------------------------------- | 23 | 174 | 73 | - | - | - | - | - | 1 | - | 1 |
| -----------------------------------CCTAGTAGGTGCTCAGTAAGTG-------------------------------------------------------------------- | 22 | 150 | 65 | 1 | 1 | - | - | 1 | 1 | - | 1 | |
| -------------------------------------------------------------------------TTTATTGAGCACCTCCTATC-------------------------------- | 20 | 109 | 97 | 1 | - | 1 | 1 | - | - | - | - | |
| -----------------------------------CCTAGTAGGTGCTCAGTAAG---------------------------------------------------------------------- | 20 | 92 | 83 | - | - | - | - | - | 1 | 2 | - | |
| -----------------------------------CCTAGTAGGTGCTCAGTAA----------------------------------------------------------------------- | 19 | 117 | 54 | - | - | - | - | - | - | 2 | - | |
| -------------------------------------------------------------------------TTTATTGAGCACCTCCTA---------------------------------- | 18 | 66 | 58 | - | - | - | - | - | 1 | - | - | |
| -------------------------------------------------------------------------TTTATTGAGCACCTCCTATCA------------------------------- | 21 | 46 | 57 | - | - | - | - | - | - | - | - | |
| rno-miR-325-3p | -------------------------------------------------------------------------TTTATTGAGCACCTCCTATCAA------------------------------ | 22 | 15 | 24 | - | - | - | - | - | 1 | - | - |
| --------------------------------------------------------------------------TTATTGAGCACCTCCTATCA------------------------------- | 20 | 13 | 6 | - | - | - | - | - | - | - | - | |
| -------------------------------------------------------------------------TTTATTGAGCACCTCCTAT--------------------------------- | 19 | 11 | 3 | - | - | - | - | - | - | - | - | |
| --------------------------------------------------------------------------TTATTGAGCACCTCCTATC-------------------------------- | 19 | 4 | 5 | - | - | - | - | - | - | - | - | |
| --------------------------------------------------------------------------TTATTGAGCACCTCCTATCAA------------------------------ | 21 | - | 4 | - | - | - | - | - | - | - | - | |
| --------------------------------------------------------------------------TTATTGAGCACCTCCTAT--------------------------------- | 18 | 1 | 2 | - | - | - | - | - | - | - | - | |
| ------------------------------------CTAGTAGGTGCTCAGTAAGTGT------------------------------------------------------------------- | 22 | - | 2 | - | - | - | - | - | - | - | - | |
| ---------------------------------------------------------TTTGTGACATAATTCGTTT------------------------------------------------- | 19 | 1 | - | - | - | - | - | - | - | - | - | |
| ----------------------------------------------------------------------------ATTGAGCACCTCCTATCA------------------------------- | 18 | - | 1 | - | - | - | - | - | - | - | - | |
| -------------------------------------------------------------------------TTTATTGAGCACCTCCTATCAAT----------------------------- | 23 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------------TCCTAGTAGGTGCTCAGTA------------------------------------------------------------------------ | 19 | - | 1 | - | - | - | - | - | - | - | - | |
| -----------------------------------CCTAGTAGGTGCTCAGTAAGTGTT------------------------------------------------------------------ | 24 | - | 1 | - | - | - | - | - | - | - | - | |
| -------------------------------------------------------------------------TTTATTGAGCACCTCCTATCAATC---------------------------- | 24 | 1 | - | - | - | - | - | - | - | - | - | |
| ------------------------------------CTAGTAGGTGCTCAGTAA----------------------------------------------------------------------- | 18 | 1 | - | - | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------------------TATTGAGCACCTCCTATC-------------------------------- | 18 | - | 1 | - | - | - | - | - | - | - | - | |
| rat | --------------------ATATAGTGCTTGGTTCCTAGTAGGTGCTCAGTAAGTGTTTGTGACATAATTCGTTTATTGAGCACCTCCTATCAATCAAGCACTGTGCTAGGCTCTGG------- | |||||||||||
| human | AGT------CCACAGAACCAATACAGTGCTTGGTTCCTAGTAGGTGTCCAGTAAGTGTTTGTGACATAATTTGTTTATTGAGGACCTCCTATCAATCAAGCACTGTGCTAGGCTCTGGGACT--- | |||||||||||
| mouse | TGTGGATTCTAACAGAGCCGATATAGTGCTTGGTTCCTAGTAGGTGCTCAGTAAGTGTTTGTGACATAATTCGTTTATTGAGCACCTCCTATCAATCAAGCACTGTGCTAGGCTCTGGGGCCACA | |||||||||||
| *** ********************** *********************** ********** *********************************** | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053750 ENSRNOG00000035627 rno-mir-325 | |||||||||||
| rat | .((((((((((((((..(((.((((((((((((((((..(........)..)))))))))))))))).)))..))))))))))))))........... | 1.000 -42.60 | ||||||||||
| human | ((( ((.((((.((..((((((((((((((..(((.((((.(((((((((((((...))))).......)))))).)))))).)))..))))))))))))))...)).))))))))) | 0.937 -46.21 | ||||||||||
| mouse | .((((.......(((((((..((((((((((((((..(((.((((((((((((((((...((......)).)))))))))))))))).)))..))))))))))))))...)))))))...)))). | 1.000 -62.40 | ||||||||||
| rat | chromosome:X:93480419:93480516:-1 | Same_strand|Exonic_non-coding|ENSRNOT00000053750|ENSRNOG00000035627 ## ENSRNOG00000035627|miRNA|rno-mir-325|rno-mir-325 [Source:miRBase;Acc:MI0000596] ## {Repeats: L2 3291 3293 -1 class=LINE/L2,L2 3253 3259 1 class=LINE/L2,L2 3230 3255 1 class=LINE/L2,L2 3270 3293 -1 class=LINE/L2,L2 3281 3399 -1 class=LINE,L2 -13 3365 1 class=LINE} ## {MIR: rno-mir-325} |
| human | chromosome:X:76142216:76142331:-1 | Same_strand|Boundary_non-coding|ENST00000385260|ENSG00000207995|miRNA|hsa-mir-325 [Source:miRBase;Acc:MI0000824] ## {Repeats: L2 -1 class=LINE/L2,L2 1 class=LINE/L2} ## {MIR: hsa-mir-325} |
| mouse | chromosome:X:102574414:102574538:-1 | Same_strand|Boundary_non-coding|ENSMUST00000083491|ENSMUSG00000065425|miRNA|mmu-mir-325 [Source:miRBase;Acc:MI0000597] ## {Repeats: L2 -1 class=LINE/L2,L2 1 class=LINE/L2} ## {MIR: mmu-mir-325} |
rno-mir-872
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-872 5arm | 659 | 599 | 339 | 526 | 1047 | 554 | 174 | 303 | 449 | 502 |
| rno-mir-872 3arm | 1084.500 | 1004.500 | 530 | 770 | 1599 | 1198.500 | 370.500 | 620.500 | 877 | 684 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-872 5arm | 0.022 | 0.026 | 0.018 | 0.031 | 0.051 | 0.042 | 0.014 | 0.016 | 0.030 | 0.033 |
| rno-mir-872 3arm | 0.036 | 0.044 | 0.029 | 0.046 | 0.078 | 0.091 | 0.029 | 0.033 | 0.058 | 0.046 |
sblock9768 (miRBase rno-mir-872) [miRNAknown_rep_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-872 | 0.001 | no | LINE,LINE/L2 | 0.32/0.50 | 18/26/0.75 | 0.0 0.0 | 0.1 1.3 | 2495 6436 | 0 0 | 10 10 | 0 0 | 10 10 | 0 2 | 5arm_loop 3arm | 1 2 | nd nd | 0.05 0.11 | 1 2 | 15217 | 10 | 2 | 2 |
| reads | miRBase family seed | |||||||||||
| seed | -------------------------------------------------------------------GAACUAU-------------------------------------------- | 9923 | miR-872* | |||||||||
| seed | ----------------------------AGGUUAC----------------------------------------------------------------------------------- | 5143 | miR-872 | |||||||||
| seed | --------------------------------------------------------------------AACUAUU------------------------------------------- | 103 | novel | |||||||||
| seed | ------------------------------------------------------------------UGAACUA--------------------------------------------- | 36 | novel | |||||||||
| seed | -----------------------------GGUUACU---------------------------------------------------------------------------------- | 9 | novel | |||||||||
| seed | -----------------------------------------------------------------------UAUUGCA---------------------------------------- | 2 | novel | |||||||||
| seed | -----------------------------------------------------------------CUGAACU---------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| rno-miR-872* | ------------------------------------------------------------------TGAACTATTGCAGTAGCCTCCT------------------------------ | 22 | 524 | 521 | 261 | 384 | 708 | 571 | 191 | 318 | 433 | 296 |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCC---------------------------------- | 18 | 311 | 287 | 145 | 224 | 432 | 329 | 95 | 166 | 247 | 233 | |
| ---------------------------AAGGTTACTTGTTAGTTCAG----------------------------------------------------------------------- | 20 | 333 | 290 | 163 | 269 | 445 | 236 | 78 | 134 | 184 | 203 | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCTCC------------------------------- | 21 | 208 | 194 | 97 | 125 | 357 | 210 | 77 | 127 | 189 | 132 | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCTC-------------------------------- | 20 | 118 | 90 | 61 | 86 | 206 | 173 | 38 | 48 | 71 | 92 | |
| rno-miR-872 | ---------------------------AAGGTTACTTGTTAGTTCAGG---------------------------------------------------------------------- | 21 | 122 | 89 | 54 | 92 | 238 | 113 | 26 | 50 | 81 | 108 |
| ---------------------------AAGGTTACTTGTTAGTTCA------------------------------------------------------------------------ | 19 | 67 | 77 | 32 | 68 | 98 | 66 | 12 | 33 | 48 | 58 | |
| ---------------------------AAGGTTACTTGTTAGTTCAGGAC-------------------------------------------------------------------- | 23 | 49 | 50 | 34 | 33 | 121 | 54 | 16 | 33 | 67 | 54 | |
| ---------------------------AAGGTTACTTGTTAGTTC------------------------------------------------------------------------- | 18 | 62 | 67 | 34 | 42 | 97 | 52 | 33 | 34 | 39 | 43 | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCTCCTA----------------------------- | 23 | 35 | 27 | 21 | 35 | 56 | 37 | 7 | 20 | 32 | 19 | |
| ---------------------------AAGGTTACTTGTTAGTTCAGGA--------------------------------------------------------------------- | 22 | 16 | 20 | 14 | 17 | 29 | 25 | 7 | 12 | 19 | 23 | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCT--------------------------------- | 19 | 24 | 16 | 10 | 20 | 30 | 26 | 3 | 7 | 12 | 14 | |
| ---------------------------AAGGTTACTTGTTAGTTCAGGACC------------------------------------------------------------------- | 24 | 5 | 6 | 8 | 5 | 18 | 7 | 2 | 6 | 11 | 12 | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCTCCTAAC--------------------------- | 25 | 3 | 5 | 4 | 11 | 11 | 7 | 2 | 6 | 8 | 11 | |
| -------------------------------------------------------------------GAACTATTGCAGTAGCCTCCT------------------------------ | 21 | 13 | 7 | 1 | 2 | 13 | 13 | 1 | 5 | 4 | 3 | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCTCCTAA---------------------------- | 24 | 1 | 1 | 3 | 4 | 4 | 5 | 2 | 4 | - | 4 | |
| -------------------------------------------------------------------GAACTATTGCAGTAGCCTCC------------------------------- | 20 | 3 | 2 | 1 | - | 6 | 1 | 3 | 1 | 5 | 1 | |
| -----------------------------------------------------------------CTGAACTATTGCAGTAGCC---------------------------------- | 19 | 2 | 3 | 1 | - | 4 | 2 | 1 | 2 | 3 | - | |
| -----------------------------------------------------------------CTGAACTATTGCAGTAGCCTCC------------------------------- | 22 | 4 | 1 | - | - | - | 1 | - | 1 | 2 | - | |
| -------------------------------------------------------------------GAACTATTGCAGTAGCCTC-------------------------------- | 19 | - | 1 | 1 | 1 | 3 | 1 | - | - | 1 | - | |
| -------------------------------------------------------------------GAACTATTGCAGTAGCCTCCTA----------------------------- | 22 | 3 | - | 2 | - | 1 | - | - | - | - | 1 | |
| -----------------------------------------------------------------CTGAACTATTGCAGTAGCCTCCT------------------------------ | 23 | 2 | 1 | - | - | 1 | - | - | 1 | 1 | - | |
| ----------------------------AGGTTACTTGTTAGTTCAG----------------------------------------------------------------------- | 19 | 3 | - | - | - | - | - | - | - | - | - | |
| ----------------------------AGGTTACTTGTTAGTTCAGGAC-------------------------------------------------------------------- | 22 | 1 | - | - | - | - | - | - | 1 | - | 1 | |
| ----------------------------------------------------------------------CTATTGCAGTAGCCTCCT------------------------------ | 18 | - | - | - | - | - | - | - | 2 | - | - | |
| -------------------------------------------------------------------GAACTATTGCAGTAGCCT--------------------------------- | 18 | - | 1 | - | - | - | - | - | - | - | 1 | |
| -----------------------------------------------------------------CTGAACTATTGCAGTAGCCTC-------------------------------- | 21 | 1 | - | - | - | - | - | - | - | - | 1 | |
| ----------------------------AGGTTACTTGTTAGTTCAGG---------------------------------------------------------------------- | 20 | 1 | - | - | - | 1 | - | - | - | - | - | |
| -----------------------------------------------------------------CTGAACTATTGCAGTAGCCT--------------------------------- | 20 | 1 | - | - | - | - | - | - | - | - | - | |
| ------------------------------------------------------------------TGAACTATTGCAGTAGCCTCCTAACT-------------------------- | 26 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------AGGTTACTTGTTAGTTCAGGA--------------------------------------------------------------------- | 21 | - | - | - | - | - | 1 | - | - | - | - | |
| ----------------------------------------------------------------CCTGAACTATTGCAGTAG------------------------------------ | 18 | 1 | - | - | - | - | - | - | - | - | - | |
| -------------------------------------------------------------------GAACTATTGCAGTAGCCTCCTAA---------------------------- | 23 | - | - | - | - | - | 1 | - | - | - | - | |
| rat | -----------------AACTTGTTAGAAGGTTACTTGTTAGTTCAGGACCTCATTACTTTCTGCCTGAACTATTGCAGTAGCCTCCTAACTGGTTAT-------------------- | |||||||||||
| mouse | GGGGTTGTGTAGATGGTAACTTGTTAGAAGGTTACTTGTTAGTTCAGGACCTCATTACTTTCTGCCTGAACTATTGCAGTAGCCTCCTAACTGGTTATCCCACCTCCATTCTTGCCCC | |||||||||||
| ********************************************************************************* | ||||||||||||
| +++++ +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +++++ | ENSRNOT00000011336 ENSRNOG00000008075 Ift74 | |||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000062972 ENSRNOG00000041219 rno-mir-872 | |||||||||||
| rat | ((((.(((((.((((((((.(((((((((((................)))))))))..)))))))))).))))).)))).. | 1.000 -31.49 | ||||||||||
| mouse | (((((.(((.((.((((((((.(((((.(((((((.((((((((((((................)))))))))..)))))))))).))))).)))))..))).)).)))....))))) | 1.000 -47.19 | ||||||||||
| rat | chromosome:5:114979205:114979285:1 | Same_strand|Intronic_coding|ENSRNOT00000011336|ENSRNOG00000008075 ## Same_strand|Exonic_non-coding|ENSRNOT00000062972|ENSRNOG00000041219 ## ENSRNOG00000041219|miRNA|rno-mir-872|rno-mir-872 [Source:miRBase;Acc:MI0006117] ## ENSRNOG00000008075|protein_coding|Ift74|coiled-coil domain containing 2 [Source:RefSeq_peptide;Acc:NP_001007002] ## {Repeats: L2 2686 2843 1 class=LINE,trf 1 16 0 class=trf,L2 2605 2633 1 class=LINE/L2,L2 2581 2592 1 class=LINE/L2} ## {MIR: rno-mir-872} |
| mouse | chromosome:4:94331831:94331948:1 | Same_strand|Boundary_non-coding|ENSMUST00000107104|ENSMUSG00000028576|protein_coding|intraflagellar transport 74 homolog (Chlamydomonas) Gene [Source:MGI (curated);Acc:Ift74-001] ## Same_strand|Intronic_coding|ENSMUST00000030311|ENSMUSG00000028576|protein_coding|intraflagellar transport 74 homolog (Chlamydomonas) Gene [Source:MGI (curated);Acc:Ift74-001] ## {Repeats: trf 0 class=trf,L2 1 class=LINE/L2} ## {MIR: mmu-mir-872} |
miRNAknown_lenNOK_cloningOK_multiarm_DicerOK_randfoldOK (2 loci)
rno-mir-871
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-871 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 0 |
| rno-mir-871 3arm | 3 | 3 | 1 | 0 | 2 | 0 | 2 | 0 | 11 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-871 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.000 | 0 |
| rno-mir-871 3arm | 0.000 | 0.000 | 0.000 | 0 | 0.000 | 0 | 0.000 | 0 | 0.001 | 0 |
sblock12737 (miRBase rno-mir-871) [miRNAknown_lenNOK_cloningOK_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-871 | 0.001 | no | no | 0.43/0.56 | 18/23/0.37 | 0.0 0.0 | 1.7 1.0 | 7 14 | 0 0 | 1 6 | 0 0 | 10 11 | 2 4 | 5arm 3arm | 1 1 | nd nd | 0.11 0.11 | 2 2 | 29 | 6 | 2 | 1 |
| reads | miRBase family seed | |||||||
| seed | -----------------------------------------------------------------GACUGGC------------------------------------------- | 21 | novel | |||||
| seed | -------------------------------AUUCAGA----------------------------------------------------------------------------- | 7 | miR-871 | |||||
| seed | -------------------------------------------------------------------CUGGCAC----------------------------------------- | 1 | novel | |||||
| len | cloning frequencies | |||||||
| T1S1 | T1S2 | T2S1 | T3S1 | T4S1 | T5S1 | |||
| ----------------------------------------------------------------TGACTGGCACCATACTGGA-------------------------------- | 19 | 1 | 1 | 1 | 2 | - | 6 | |
| ----------------------------------------------------------------TGACTGGCACCATACTGGATAA----------------------------- | 22 | 1 | - | - | - | - | 4 | |
| ----------------------------------------------------------------TGACTGGCACCATACTGG--------------------------------- | 18 | - | 1 | - | - | 2 | 1 | |
| ------------------------------TATTCAGATTGGTGCCGG------------------------------------------------------------------- | 18 | - | - | - | - | - | 3 | |
| ------------------------------TATTCAGATTGGTGCCGGTCAC--------------------------------------------------------------- | 22 | - | - | - | - | - | 2 | |
| ------------------------------TATTCAGATTGGTGCCGGT------------------------------------------------------------------ | 19 | - | - | - | - | - | 1 | |
| ------------------------------------------------------------------ACTGGCACCATACTGGATAA----------------------------- | 20 | - | 1 | - | - | - | - | |
| ----------------------------------------------------------------TGACTGGCACCATACTGGATAAT---------------------------- | 23 | 1 | - | - | - | - | - | |
| ------------------------------TATTCAGATTGGTGCCGGTCA---------------------------------------------------------------- | 21 | - | - | - | - | - | 1 | |
| rno-miR-871 | ------------------------------TATTCAGATTGGTGCCGGTCACA-------------------------------------------------------------- | 23 | - | - | - | - | - | - |
| rat | --------------------TGCAGTGCCCTATTCAGATTGGTGCCGGTCACATGAAGTACATATGACTGGCACCATACTGGATAATGTAATGCTCA------------------ | |||||||
| human | CCACTATCAGTCGTGCTGTGGGCAGTGCCCTATTCAGAAAGGTGCCAGTCACTTAGATTACATGTCACTGTTTCCTTTCTGAGTGGAGTAGGGCTTACCAAGTACAAGTGTGTGG | |||||||
| mouse | ------TTGTGTGAGTTGTGTGCAGTGCTCTATTCAGATTAGTGCCAGTCATGTGAAATACATATGACTGGCACCATTCTGGATAATGTAATGCTCACTATATTC-----TTCAA | |||||||
| ******* ********* ***** **** * * ***** * **** ** * *** * *** *** * | ||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000063087 ENSRNOG00000041334 rno-mir-871 | |||||||
| rat | .(((.(((..(((((((..((((((((((((.(((.....))).))))))))))))..)))))))..))).)))... | 1.000 -37.60 | ||||||
| human | ((((...((...(((((((((((..(((.(((((((((((((...((((.((...........)).))))...))))))))))))).)))..))))))..)))))...)).)))) | 1.000 -44.60 | ||||||
| mouse | .((...((((.(((.(((.(((..((((((((...((((((((((((((.....))))))))))))))...))))))))..))).))).)))...)))) ..)). | 1.000 -47.80 | ||||||
| rat | chromosome:X:152856065:152856141:-1 | Same_strand|Exonic_non-coding|ENSRNOT00000063087|ENSRNOG00000041334 ## ENSRNOG00000041334|miRNA|rno-mir-871|rno-mir-871 [Source:miRBase;Acc:MI0006116] ## {MIR: rno-mir-871} |
| human | chromosome:X:144881942:144882056:-1 | intergenic |
| mouse | chromosome:X:64063590:64063693:-1 | Same_strand|Boundary_non-coding|ENSMUST00000104751|ENSMUSG00000077944|miRNA|mmu-mir-871 [Source:miRBase;Acc:MI0005471] ## {MIR: mmu-mir-871} |
rno-mir-190b
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-190b 5arm | 6.500 | 3 | 2 | 6 | 5 | 5 | 1 | 0 | 0 | 3.500 |
| rno-mir-190b 3arm | 1.333 | 1.000 | 0 | 0.333 | 0 | 0 | 0 | 0 | 0.333 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-190b 5arm | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0 | 0 | 0.000 |
| rno-mir-190b 3arm | 0.000 | 0.000 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0.000 | 0 |
sblock6540 (miRBase rno-mir-190b) [miRNAknown_lenNOK_cloningOK_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-190b | 0.001 | no | no | 0.22/0.32 | 18/24/0.55 | 0.1 0.2 | 2.2 1.1 | 37 9 | 0 0 | 8 4 | 0 0 | 10 9 | 0 3 | 5arm 3arm | 2 3 | nd nd | 0.06 0.09 | 1 1 | 46 | 9 | 2 | 3 |
| Member of family miR-190/190b (seed GAUAUGU): rno-mir-190, rno-mir-190b |
| reads | miRBase family seed | ||||||||||
| seed | -----------------------------GAUAUGU------------------------------------------------------------------------ | 35 | miR-190/190b | ||||||||
| seed | -----------------------------------------------------------------ACUAAAU------------------------------------ | 7 | novel | ||||||||
| seed | ------------------------------------------------------------------CUAAAUG----------------------------------- | 1 | novel | ||||||||
| seed | ----------------------------------------------------------------AACUAAA------------------------------------- | 1 | novel | ||||||||
| seed | ------------------------------AUAUGUU----------------------------------------------------------------------- | 1 | novel | ||||||||
| seed | ---------------------------------UGUUUGA-------------------------------------------------------------------- | 1 | novel | ||||||||
| len | cloning frequencies | ||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T5S1 | T5S2 | |||
| ----------------------------TGATATGTTTGATATTAG-------------------------------------------------------------- | 18 | 1 | - | - | 2 | 2 | 2 | - | - | 3 | |
| ----------------------------TGATATGTTTGATATTAGG------------------------------------------------------------- | 19 | 1 | 1 | 1 | 2 | - | - | - | - | 2 | |
| ----------------------------TGATATGTTTGATATTAGGTTGT--------------------------------------------------------- | 23 | 3 | - | - | 1 | 1 | - | - | - | - | |
| ----------------------------TGATATGTTTGATATTAGGT------------------------------------------------------------ | 20 | 1 | 1 | - | 1 | - | 1 | - | - | - | |
| rno-miR-190b | ----------------------------TGATATGTTTGATATTAGGTT----------------------------------------------------------- | 21 | - | - | - | - | 2 | 2 | - | - | - |
| ----------------------------------------------------------------AACTAAATGTCAAACAT--TCTC--------------------- | 21 | 2 | - | - | 1 | - | - | - | - | - | |
| ----------------------------TGATATGTTTGATATTAGGTTG---------------------------------------------------------- | 22 | - | - | - | - | 1 | 1 | 1 | - | - | |
| ----------------------------------------------------------------AACTAAATGTCAAACAT--TC----------------------- | 19 | 1 | 1 | - | - | - | - | - | - | - | |
| ----------------------------TGATATGTTTGATATTAGGTTGTT-------------------------------------------------------- | 24 | 1 | - | - | 1 | - | - | - | - | - | |
| ----------------------------------------------------------------AACTAAATGTCAAACAT--TCTCAC------------------- | 23 | 1 | 1 | - | - | - | - | - | - | - | |
| --------------------------------ATGTTTGATATTAGGTTG---------------------------------------------------------- | 18 | - | - | 1 | - | - | - | - | - | - | |
| -----------------------------------------------------------------ACTAAATGTCAAACAT--TCTCAC------------------- | 22 | - | 1 | - | - | - | - | - | - | - | |
| -----------------------------GATATGTTTGATATTAGGT------------------------------------------------------------ | 19 | - | 1 | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------CAACTAAATGTCAAACAT--TCTC--------------------- | 22 | - | - | - | - | - | - | - | 1 | - | |
| rat | ------------------TGCTTCTGTGTGATATGTTTGATATTAGGTTGTTAAATTATGAACCAACTAAATGTCAAACAT--TCTCACAGCAGTGAG---------- | ||||||||||
| human | -------GCTCTCCTGCCTGCTTCTGTGTGATATGTTTGATATTGGGTTGTTTAATTAGGAACCAACTAAATGTCAAACATATTCTTACAGCAGC-AGGTGATTCAGC | ||||||||||
| mouse | GACCAGAGTTTGCCTGCCTGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAGGAGACTTGGC | ||||||||||
| ************************** ******* ***** ********* ******** *** *** ******* ** | |||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>> ..... | ENSRNOT00000062998 ENSRNOG00000041245 rno-mir-190b | ||||||||||
| rat | .(((.(((((.((.((((((((((((.(((((((........)).))))).)))))))))))) )).))))).)))... | 1.000 -28.20 | |||||||||
| human | (((.....(((((((.(((((.(((((((((((((((.((((((((......)))).)))).)))))))))))))))..))))).))) )))).....))) | 1.000 -41.80 | |||||||||
| mouse | ..(((.(((((.(((..((((...((((.(((((((((((((((.(((((((........))).)))).))))))))))))).)).))))))))..))))))))))). | 1.000 -42.40 | |||||||||
| rat | chromosome:2:182295090:182295167:1 | Same_strand|Exonic_non-coding|ENSRNOT00000062998|ENSRNOG00000041245 ## ENSRNOG00000041245|miRNA|rno-mir-190b|rno-mir-190b [Source:miRBase;Acc:MI0006135] ## {MIR: rno-mir-190b} |
| human | chromosome:1:152432755:152432854:-1 | Same_strand|Boundary_non-coding|ENST00000401119|ENSG00000215938|miRNA|hsa-mir-190b [Source:miRBase;Acc:MI0005545] ## {MIR: hsa-mir-190b} |
| mouse | chromosome:3:89873924:89874031:1 | Same_strand|Boundary_non-coding|ENSMUST00000104803|ENSMUSG00000077996|miRNA|mmu-mir-190b [Source:miRBase;Acc:MI0005478] ## {MIR: mmu-mir-190b} |
miRNAknown_cloningHIGH_multiarm_DicerOK_shortStem_randfoldOK (1 loci)
rno-mir-338
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-338 5arm | 4617 | 2658 | 21 | 26 | 65 | 56 | 31 | 85 | 17 | 17 |
| rno-mir-338 3arm | 11556.500 | 9370 | 108.500 | 147.500 | 327.500 | 404 | 152 | 278.500 | 87 | 105 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-338 5arm | 0.153 | 0.116 | 0.001 | 0.002 | 0.003 | 0.004 | 0.002 | 0.004 | 0.001 | 0.001 |
| rno-mir-338 3arm | 0.384 | 0.409 | 0.006 | 0.009 | 0.016 | 0.031 | 0.012 | 0.015 | 0.006 | 0.007 |
sblock2543 (miRBase rno-mir-338) [miRNAknown_cloningHIGH_multiarm_DicerOK_shortStem_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-338 | 0.002 | no | no | 0.33/0.53 | 18/25/0.77 | 0.0 0.0 | 0.2 1.8 | 4339 19331 | 0 0 | 10 10 | 0 0 | 5 3 | 4 6 | 5arm 3arm | 1 2 | nd nd | 0.05 0.15 | 1 1 | 32987 | 10 | 2 | 2 |
| reads | miRBase family seed | |||||||||||
| seed | -------------------------------------------------------------CCAGCAU----------------------------------- | 23934 | miR-338 | |||||||||
| seed | -------------------------ACAAUAU----------------------------------------------------------------------- | 6887 | miR-338* | |||||||||
| seed | --------------------------------------------------------------CAGCAUC---------------------------------- | 1373 | novel | |||||||||
| seed | -----------------------CAACAAU------------------------------------------------------------------------- | 659 | novel | |||||||||
| seed | ----------------------------------------------------------------GCAUCAG-------------------------------- | 73 | novel | |||||||||
| seed | ------------------------AACAAUA------------------------------------------------------------------------ | 26 | novel | |||||||||
| seed | ----------------------CCAACAA-------------------------------------------------------------------------- | 11 | novel | |||||||||
| seed | ------------------------------------------------------------UCCAGCA------------------------------------ | 7 | novel | |||||||||
| seed | --------------------------CAAUAUC---------------------------------------------------------------------- | 6 | novel | |||||||||
| seed | ---------------------------------------------------------------AGCAUCA--------------------------------- | 5 | novel | |||||||||
| seed | ---------------------------AAUAUCC--------------------------------------------------------------------- | 3 | novel | |||||||||
| seed | -----------------------------------------------------------------CAUCAGU------------------------------- | 2 | novel | |||||||||
| seed | -----------------------------UAUCCUG------------------------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| rno-miR-338 | ------------------------------------------------------------TCCAGCATCAGTGATTTTGTTGA-------------------- | 23 | 3701 | 2858 | 25 | 47 | 100 | 122 | 29 | 75 | 27 | 31 |
| ------------------------------------------------------------TCCAGCATCAGTGATTTTGTTG--------------------- | 22 | 2904 | 2528 | 35 | 34 | 86 | 101 | 46 | 87 | 33 | 29 | |
| ------------------------AACAATATCCTGGTGCTGAGT---------------------------------------------------------- | 21 | 2246 | 1284 | 7 | 13 | 26 | 18 | 14 | 43 | 9 | 6 | |
| ------------------------------------------------------------TCCAGCATCAGTGATTTTGT----------------------- | 20 | 1832 | 1426 | 20 | 27 | 50 | 74 | 29 | 44 | 7 | 14 | |
| ------------------------------------------------------------TCCAGCATCAGTGATTTT------------------------- | 18 | 1420 | 1169 | 11 | 20 | 30 | 54 | 14 | 31 | 10 | 13 | |
| ------------------------------------------------------------TCCAGCATCAGTGATTTTG------------------------ | 19 | 1493 | 1094 | 11 | 14 | 41 | 38 | 19 | 34 | 6 | 7 | |
| ------------------------------------------------------------TCCAGCATCAGTGATTTTGTT---------------------- | 21 | 889 | 773 | 4 | 10 | 33 | 27 | 16 | 17 | 7 | 13 | |
| ------------------------AACAATATCCTGGTGCTGAG----------------------------------------------------------- | 20 | 809 | 474 | 4 | 1 | 9 | 10 | 4 | 15 | 5 | 2 | |
| ------------------------AACAATATCCTGGTGCTGA------------------------------------------------------------ | 19 | 442 | 303 | 2 | 5 | 11 | 8 | 3 | 4 | - | 1 | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTGTTGA-------------------- | 22 | 298 | 265 | 8 | 6 | 7 | 13 | 7 | 8 | 2 | 3 | |
| rno-miR-338* | ------------------------AACAATATCCTGGTGCTGAGTG--------------------------------------------------------- | 22 | 348 | 190 | 5 | 3 | 8 | 4 | 3 | 6 | 2 | 4 |
| ------------------------AACAATATCCTGGTGCTG------------------------------------------------------------- | 18 | 275 | 184 | 3 | - | 3 | 6 | 1 | 11 | - | - | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTGTTG--------------------- | 21 | 138 | 109 | 2 | 3 | 9 | 10 | 1 | 5 | 2 | 3 | |
| ----------------------CCAACAATATCCTGGTGC--------------------------------------------------------------- | 18 | 143 | 66 | - | 1 | 3 | 4 | 2 | 2 | 1 | 4 | |
| ----------------------CCAACAATATCCTGGTGCTGAGT---------------------------------------------------------- | 23 | 148 | 44 | - | 2 | 2 | 2 | 2 | - | - | - | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTG------------------------ | 18 | 84 | 89 | 1 | 1 | 2 | 4 | 1 | 4 | - | - | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTGT----------------------- | 19 | 89 | 75 | 3 | 1 | 3 | 3 | 4 | 4 | 1 | 1 | |
| ------------------------------------------------------------TCCAGCATCAGTGATTTTGTTGAA------------------- | 24 | 98 | 72 | - | - | 1 | 3 | 3 | - | - | 1 | |
| ----------------------CCAACAATATCCTGGTGCT-------------------------------------------------------------- | 19 | 51 | 31 | - | - | 2 | - | 1 | 1 | - | - | |
| ----------------------CCAACAATATCCTGGTGCTGA------------------------------------------------------------ | 21 | 44 | 29 | - | 1 | - | 2 | - | - | - | - | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTGTT---------------------- | 20 | 41 | 26 | - | - | - | 3 | - | 2 | - | - | |
| ----------------------CCAACAATATCCTGGTGCTGAG----------------------------------------------------------- | 22 | 36 | 18 | - | - | - | 1 | 1 | - | - | - | |
| ------------------------AACAATATCCTGGTGCTGAGTGG-------------------------------------------------------- | 23 | 38 | 10 | - | - | 1 | - | - | - | - | - | |
| ---------------------------------------------------------------AGCATCAGTGATTTTGTTGAAG------------------ | 22 | 21 | 12 | - | 1 | 1 | - | - | 2 | - | - | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTGTTGAA------------------- | 23 | 15 | 14 | - | 1 | 1 | - | - | - | - | - | |
| ---------------------------------------------------------------AGCATCAGTGATTTTGTTGA-------------------- | 20 | 8 | 10 | - | - | - | - | - | - | - | - | |
| ------------------------------------------------------------TCCAGCATCAGTGATTTTGTTGAAG------------------ | 25 | 7 | 10 | - | - | - | - | - | - | - | - | |
| -----------------------CAACAATATCCTGGTGCT-------------------------------------------------------------- | 18 | 7 | 3 | - | - | - | - | - | - | - | - | |
| ---------------------CCCAACAATATCCTGGTGC--------------------------------------------------------------- | 19 | 3 | 3 | - | - | - | - | - | 2 | - | - | |
| ----------------------CCAACAATATCCTGGTGCTGAGTG--------------------------------------------------------- | 24 | 5 | 3 | - | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------AGCATCAGTGATTTTGTTGAA------------------- | 21 | 5 | 3 | - | - | - | - | - | - | - | - | |
| -----------------------CAACAATATCCTGGTGCTGA------------------------------------------------------------ | 20 | 3 | 4 | - | - | - | - | - | - | - | - | |
| ----------------------CCAACAATATCCTGGTGCTG------------------------------------------------------------- | 20 | 5 | 1 | - | - | - | - | - | 1 | - | - | |
| -----------------------------------------------------------CTCCAGCATCAGTGATTT-------------------------- | 18 | 2 | 3 | - | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------AGCATCAGTGATTTTGTTG--------------------- | 19 | 3 | 2 | - | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------AGCATCAGTGATTTTGTT---------------------- | 18 | 2 | 2 | - | - | - | - | - | - | - | - | |
| -------------------------ACAATATCCTGGTGCTGAGT---------------------------------------------------------- | 20 | 3 | 1 | - | - | - | - | - | - | - | - | |
| -----------------------CAACAATATCCTGGTGCTGAG----------------------------------------------------------- | 21 | 2 | 1 | - | - | - | - | - | - | - | - | |
| --------------------------CAATATCCTGGTGCTGAGT---------------------------------------------------------- | 19 | 1 | 2 | - | - | - | - | - | - | - | - | |
| -----------------------CAACAATATCCTGGTGCTGAGT---------------------------------------------------------- | 22 | 1 | 2 | - | - | - | - | - | - | - | - | |
| ------------------------AACAATATCCTGGTGCTGAGTGGGT------------------------------------------------------ | 25 | 1 | 1 | - | - | - | 1 | - | - | - | - | |
| --------------------------------------------------------------CAGCATCAGTGATTTTGTTG--------------------- | 20 | 2 | 1 | - | - | - | - | - | - | - | - | |
| -----------------------CAACAATATCCTGGTGCTG------------------------------------------------------------- | 19 | 2 | - | - | - | - | - | - | - | - | - | |
| --------------------------------------------------------------CAGCATCAGTGATTTTGT----------------------- | 18 | 1 | 1 | - | - | - | - | - | - | - | - | |
| -------------------------ACAATATCCTGGTGCTGAG----------------------------------------------------------- | 19 | 1 | 1 | - | - | - | - | - | - | - | - | |
| -----------------------CAACAATATCCTGGTGCTGAGTG--------------------------------------------------------- | 23 | - | 1 | - | - | - | - | - | - | - | - | |
| -----------------------------------------------------------CTCCAGCATCAGTGATTTTGTTG--------------------- | 23 | 1 | - | - | - | - | - | - | - | - | - | |
| -------------------------------------------------------------CCAGCATCAGTGATTTTGTTGAAG------------------ | 24 | 1 | - | - | - | - | - | - | - | - | - | |
| ------------------------AACAATATCCTGGTGCTGAGTGGG------------------------------------------------------- | 24 | - | 1 | - | - | - | - | - | - | - | - | |
| ---------------------CCCAACAATATCCTGGTGCT-------------------------------------------------------------- | 20 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------------------------------------------GCATCAGTGATTTTGTTGAAG------------------ | 21 | - | 1 | - | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------AGCATCAGTGATTTTGTTGAAGA----------------- | 23 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------------------------------------------GCATCAGTGATTTTGTTGA-------------------- | 19 | - | 1 | - | - | - | - | - | - | - | - | |
| -----------------------------------------------------------CTCCAGCATCAGTGATTTTGTTGA-------------------- | 24 | - | 1 | - | - | - | - | - | - | - | - | |
| ---------------------CCCAACAATATCCTGGTG---------------------------------------------------------------- | 18 | 1 | - | - | - | - | - | - | - | - | - | |
| ----------------------------ATATCCTGGTGCTGAGTG--------------------------------------------------------- | 18 | 1 | - | - | - | - | - | - | - | - | - | |
| ---------------------CCCAACAATATCCTGGTGCTG------------------------------------------------------------- | 21 | 1 | - | - | - | - | - | - | - | - | - | |
| rat | -------------------TCCCCAACAATATCCTGGTGCTGAGTGGGTGCACA-GTGACTCCAGCATCAGTGATTTTGTTGAAGA----------------- | |||||||||||
| human | GACGCCGCAC-GGCTGTCCTCTCCAACAATATCCTGGTGCTGAGTGATGACTCAGGCGACTCCAGCATCAGTGATTTTGTTGAAGAGGGCAGCTGCCAGCCTC | |||||||||||
| mouse | ---GCTGCACAGGCCGTCCTCCCCAACAATATCCTGGTGCTGAGTGGGTGCACA-GTGACTCCAGCATCAGTGATTTTGTTGAAGAGGGCAGCTGCCAGC--- | |||||||||||
| ** ************************ * ** * ***************************** | ||||||||||||
| +++++ +++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++ +++++ | ENSRNOT00000005839 ENSRNOG00000004392 LOC690853 | |||||||||||
| +++++ +++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++ +++++ | ENSRNOT00000040443 ENSRNOG00000004392 LOC690853 | |||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053588 ENSRNOG00000035465 rno-mir-338 | |||||||||||
| rat | ....((((((.(((((((((((((((.(.(....) .).))).))))))))).))).)))))).... | 1.000 -27.20 | ||||||||||
| human | ((.((....( (((((((((((.((((((.(((((((((((((((.............)))).)))))))).))).)))))).))))))))))))...)).)) | 0.896 -49.22 | ||||||||||
| mouse | ((((....(((.((((((..((((((.((((((((((((...((((..... ...))))))))))))).))).))))))..)))))).)))..)))) | 1.000 -45.10 | ||||||||||
| rat | chromosome:10:109426992:109427057:-1 | Same_strand|Boundary_non-coding|ENSRNOT00000053588|ENSRNOG00000035465 ## Same_strand|Exonic_non-coding|ENSRNOT00000053588|ENSRNOG00000035465 ## Same_strand|Intronic_coding|ENSRNOT00000005839|ENSRNOG00000004392 ## ENSRNOG00000004392|protein_coding|LOC690853| ## ENSRNOG00000035465|miRNA|rno-mir-338|rno-mir-338 [Source:miRBase;Acc:MI0000618] ## {MIR: rno-mir-338} |
| human | chromosome:17:76714261:76714362:-1 | Same_strand|Intronic_coding|ENST00000326724|ENSG00000181409|protein_coding|Serine/threonine-protein kinase LMTK1 (EC 2.7.11.1)(Lemur tyrosine kinase 1)(Apoptosis-associated tyrosine kinase)(AATYK)(Brain apoptosis-associated tyrosine kinase)(CDK5-binding protein)(p35-binding protein)(p35BP) [Source:UniProtKB/Swiss-Prot;Acc:Q6ZMQ8] ## Same_strand|Boundary_non-coding|ENST00000390137|ENSG00000211563|miRNA|hsa-mir-338 [Source:miRBase;Acc:MI0000814] ## {MIR: hsa-mir-338} |
| mouse | chromosome:11:119876077:119876172:-1 | Same_strand|Intronic_coding|ENSMUST00000064307|ENSMUSG00000025375|protein_coding|apoptosis-associated tyrosine kinase Gene [Source:MGI (curated);Acc:Aatk-001] ## Same_strand|Boundary_non-coding|ENSMUST00000083666|ENSMUSG00000065600|miRNA|mmu-mir-338 [Source:miRBase;Acc:MI0000619] ## {MIR: mmu-mir-338} |
miRNAknown_cloningHIGH_shortStem_randfoldOK (1 loci)
rno-mir-203
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-203 5arm | 4 | 4 | 14 | 11 | 3 | 1 | 2 | 0 | 30 | 18.500 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-203 5arm | 0.000 | 0.000 | 0.001 | 0.001 | 0.000 | 0.000 | 0.000 | 0 | 0.002 | 0.001 |
sblock10529 (miRBase rno-mir-203) [miRNAknown_cloningHIGH_shortStem_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-203 | 0.001 | no | no | 0.35/0.84 | 18/26/0.71 | 0.0 0.0 0.0 | 0.4 1.4 0.0 | 37 3608 1 | 0 0 0 | 9 10 1 | 0 0 0 | 13 51 73 | 5 -34 -53 | 5arm loop loop | 2 2 2 | nd nd nd | 0.14 0.11 0.42 | 1 1 4 | 7650 | 10 | na | na |
| Member of family miR-203 (seed UGAAAUG): rno-mir-203, block1278165_cand |
| reads | miRBase family seed | |||||||||||
| seed | -----------------------------------------------------------------------UGAAAUG----------------------------------------- | 6875 | miR-203 | |||||||||
| seed | ------------------------------------------------------------------------GAAAUGU---------------------------------------- | 541 | novel | |||||||||
| seed | ----------------------------------------------------------------------GUGAAAU------------------------------------------ | 107 | novel | |||||||||
| seed | ---------------------------------GUGGUUC------------------------------------------------------------------------------- | 102 | novel | |||||||||
| seed | ---------------------------------------------------------------------UGUGAAA------------------------------------------- | 14 | novel | |||||||||
| seed | -------------------------------------------------------------------------AAAUGUU--------------------------------------- | 10 | novel | |||||||||
| seed | ---------------------------------------------------------------------------------------------CCCGGCG------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| rno-miR-203 | ----------------------------------------------------------------------GTGAAATGTTTAGGACCACTAG--------------------------- | 22 | 63 | 42 | 286 | 208 | 42 | 18 | 14 | 17 | 817 | 392 |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCACT----------------------------- | 20 | 60 | 45 | 204 | 218 | 64 | 33 | 17 | 38 | 703 | 465 | |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCA------------------------------- | 18 | 37 | 26 | 171 | 167 | 62 | 27 | 16 | 18 | 330 | 274 | |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCACTA---------------------------- | 21 | 26 | 13 | 148 | 140 | 29 | 16 | 7 | 12 | 341 | 129 | |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCAC------------------------------ | 19 | 20 | 16 | 104 | 100 | 19 | 21 | 4 | 9 | 240 | 224 | |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCACTAGAC------------------------- | 24 | 13 | 8 | 34 | 32 | 10 | 4 | 2 | 1 | 142 | 73 | |
| -----------------------------------------------------------------------TGAAATGTTTAGGACCACTAG--------------------------- | 21 | 10 | 3 | 72 | 59 | 4 | 11 | 2 | - | 46 | 22 | |
| -----------------------------------------------------------------------TGAAATGTTTAGGACCACT----------------------------- | 19 | 2 | 3 | 26 | 21 | 6 | 2 | 2 | 3 | 35 | 35 | |
| -----------------------------------------------------------------------TGAAATGTTTAGGACCAC------------------------------ | 18 | 3 | 3 | 22 | 31 | - | 1 | 1 | - | 19 | 24 | |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCACTAGA-------------------------- | 23 | 1 | - | 9 | 6 | 5 | - | 1 | 1 | 16 | 13 | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACCA------------------------------- | 19 | 2 | 1 | 7 | 3 | - | 3 | - | - | 14 | 15 | |
| -----------------------------------------------------------------------TGAAATGTTTAGGACCACTAGAC------------------------- | 23 | - | - | 10 | 7 | 1 | - | - | - | 9 | 15 | |
| --------------------------------AGTGGTTCTTAACAGTTCAAC------------------------------------------------------------------ | 21 | 2 | 1 | 6 | 1 | - | - | 1 | - | 17 | 7 | |
| -----------------------------------------------------------------------TGAAATGTTTAGGACCACTA---------------------------- | 20 | 1 | 2 | 6 | 8 | 1 | - | - | - | 7 | 1 | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACCACT----------------------------- | 21 | - | - | - | 1 | - | - | - | - | 10 | 8 | |
| --------------------------------AGTGGTTCTTAACAGTTCA-------------------------------------------------------------------- | 19 | - | 1 | 2 | 4 | 2 | - | 2 | - | 7 | - | |
| --------------------------------AGTGGTTCTTAACAGTTCAACA----------------------------------------------------------------- | 22 | 2 | - | 1 | 3 | 1 | - | - | - | 5 | 4 | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACC-------------------------------- | 18 | 2 | - | 3 | 1 | - | - | - | - | 3 | 7 | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACCAC------------------------------ | 20 | - | - | 1 | 2 | - | - | - | - | 4 | 5 | |
| ----------------------------------------------------------------------GTGAAATGTTTAGGACCACTAGACC------------------------ | 25 | - | 1 | 2 | 3 | 1 | 1 | - | - | - | 4 | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACCACTAG--------------------------- | 23 | - | - | 2 | 2 | - | - | - | - | 4 | 4 | |
| --------------------------------AGTGGTTCTTAACAGTTCAA------------------------------------------------------------------- | 20 | - | 2 | 1 | 4 | - | 1 | - | - | 1 | 3 | |
| --------------------------------AGTGGTTCTTAACAGTTC--------------------------------------------------------------------- | 18 | - | 1 | 2 | 2 | 2 | - | - | - | 3 | 1 | |
| ------------------------------------------------------------------------GAAATGTTTAGGACCACTAG--------------------------- | 20 | - | - | 1 | - | - | - | - | - | 6 | 2 | |
| --------------------------------AGTGGTTCTTAACAGTTCAACAG---------------------------------------------------------------- | 23 | - | - | 2 | - | - | - | - | - | 1 | 4 | |
| -----------------------------------------------------------------------TGAAATGTTTAGGACCACTAGA-------------------------- | 22 | - | - | 1 | - | 1 | - | - | - | 1 | 2 | |
| --------------------------------------------------------------------TTGTGAAATGTTTAGGACCACT----------------------------- | 22 | - | - | 2 | - | - | - | - | - | 2 | - | |
| --------------------------------------------------------------------TTGTGAAATGTTTAGGACCA------------------------------- | 20 | - | - | - | 1 | - | - | - | - | 2 | - | |
| --------------------------------------------------------------------TTGTGAAATGTTTAGGACCAC------------------------------ | 21 | - | - | 1 | - | - | - | - | - | 1 | 1 | |
| --------------------------------------------------------------------TTGTGAAATGTTTAGGACCACTA---------------------------- | 23 | - | - | 2 | - | - | - | - | - | 1 | - | |
| --------------------------------AGTGGTTCTTAACAGTTCAACAGT--------------------------------------------------------------- | 24 | - | - | 2 | - | - | - | - | - | - | - | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACCACTA---------------------------- | 22 | - | - | - | - | - | - | - | - | 1 | 1 | |
| --------------------------------------------------------------------TTGTGAAATGTTTAGGACC-------------------------------- | 19 | - | - | - | - | - | - | - | - | 1 | - | |
| --------------------------------AGTGGTTCTTAACAGTTCAACAGTTC------------------------------------------------------------- | 26 | - | - | - | - | - | - | - | - | 1 | - | |
| ------------------------------------------------------------------------GAAATGTTTAGGACCACT----------------------------- | 18 | - | - | - | - | - | - | - | - | - | 1 | |
| --------------------------------------------------------------------------------------------ACCCGGCGCGCACGGCAGC-------- | 19 | - | - | - | - | - | - | - | - | 1 | - | |
| ---------------------------------------------------------------------TGTGAAATGTTTAGGACCACTAGAC------------------------- | 25 | - | - | - | - | - | - | - | - | - | 1 | |
| rat | -------------------GCGCGCCTGGTCCAGTGGTTCTTAACAGTTCAACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACCCGGCGCGCACGGCAGCGGCGA--- | |||||||||||
| human | CCGACGGTGTTGGGGACTCGCGCGCTGGGTCCAGTGGTTCTTAACAGTTCAACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACCCGGCGGGCGCGGCGACAGCGACGG | |||||||||||
| mouse | -------------------GCGCGCCTGGTCCAGTGGTTCTTGACAGTTCAACAGTTCTGTAGCACAATTGTGAAATGTTTAGGACCACTAGACCCGGCGCGC---------------- | |||||||||||
| ****** *************** ********************* *********************************** ** | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053612 ENSRNOG00000035489 rno-mir-203 | |||||||||||
| rat | (((((((.((((.(((((((((.((((.((((.((((((......).))))))))).)))).))))))))).)))).)))))))...((....)).. | 1.000 -49.20 | ||||||||||
| human | (((.((.(((((....(((((.(((((((((.(((((((((.((((.(((.(((((..((.....)))))))))).)))).))))))))).))))))))).))).))))))).)).))) | 0.998 -59.70 | ||||||||||
| mouse | (((((((.((((.(((((((((.((((.(((.((((((.((...)).))))))))).)))).))))))))).)))).))))))) | 0.998 -47.20 | ||||||||||
| rat | chromosome:6:136932089:136932185:1 | Same_strand|Exonic_non-coding|ENSRNOT00000053612|ENSRNOG00000035489 ## ENSRNOG00000035489|miRNA|rno-mir-203|rno-mir-203 [Source:miRBase;Acc:MI0000945] ## {MIR: rno-mir-203} |
| human | chromosome:14:103653489:103653607:1 | Same_strand|Boundary_non-coding|ENST00000384836|ENSG00000207568|miRNA|hsa-mir-203 [Source:miRBase;Acc:MI0000283] ## {SimpF: oe = 0.84 0 CpG,rank = 1 1 FirstEF} ## {MIR: hsa-mir-203} |
| mouse | chromosome:12:113369087:113369170:1 | Same_strand|Boundary_non-coding|ENSMUST00000083640|ENSMUSG00000065574|miRNA|mmu-mir-203 [Source:miRBase;Acc:MI0000246] ## {SimpF: oe = 0.89 -1 CpG} ## {MIR: mmu-mir-203} |
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