other hairpins
novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH (170 loci)
sblock8866 [novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.240 | no | no | 0.74/0.89 | 18/19/0.00 | 0.0 0.0 | 0.0 0.0 | 5 1 | 0 0 | 4 1 | 0 0 | 43 14 | -3 26 | 5arm_loop_3arm 3arm | 1 1 | nd nd | 0.50 0.42 | 4 3 | 6 | 5 | na | na |
| reads | miRBase family seed | ||||||
| seed | --------------------------------------------CCAAGGC--------------------------------------------------------------------- | 5 | novel | ||||
| seed | ----------------------------------------------------------------------------------------CUCCGCA------------------------- | 1 | novel | ||||
| len | cloning frequencies | ||||||
| T1S1 | T2S2 | T3S1 | T3S2 | T4S1 | |||
| -------------------------------------------GCCAAGGCGCCCGGCCCC----------------------------------------------------------- | 18 | 1 | 2 | 1 | 1 | - | |
| ---------------------------------------------------------------------------------------CCTCCGCACCGCCCTTCAC-------------- | 19 | - | - | - | - | 1 | |
| rat | cgccgagcgggcctcggaagccccgtggcggagcaggctggcaGCCAAGGCGCCCGGCCCCgccaccagcctccgccgtgcccctgcCCTCCGCACCGCCCTTCACcgcccgcacctgct | ||||||
| ************************************************************************************************************************ | |||||||
| ------------------------------------------------------------------------------------------------------------------------<<<<<<<<<< | ENSRNOT00000013932 ENSRNOG00000010453 Klhl7 | ||||||
| rat | .((...((((((....((((...((..((((((((((..((((((..((((....(((...)))....))))..))..)))))))))..)))))..))..))))...))))))....)). | 0.770 -53.70 | |||||
| rat | chromosome:4:6422112:6422231:1 | Opposite_strand|Intronic_coding|ENSRNOT00000013932|ENSRNOG00000010453 ## ENSRNOG00000010453|protein_coding|Klhl7|Kelch-like protein 7. [Source:UniProtKB/Swiss-Prot;Acc:Q5XHZ6] |
sblock8900 [novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.241 | no | no | 0.50/0.78 | 18/20/0.50 | 0.0 0.0 | 0.0 0.0 | 1 1 | 0 0 | 1 1 | 0 0 | 8 17 | 8 -4 | 5arm 3arm_loop | 1 1 | nd nd | 0.33 0.35 | 3 3 | 2 | 2 | na | na |
| reads | miRBase family seed | |||
| seed | ---------CCGCUGA------------------------------------------------------- | 1 | novel | |
| seed | -----------------------------------CCUUCCU----------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T3S1 | T5S2 | |||
| --------GCCGCTGAGGCGAACCGC--------------------------------------------- | 18 | 1 | - | |
| ----------------------------------ACCTTCCTAGTATGGACGAC----------------- | 20 | - | 1 | |
| rat | ggtaggcaGCCGCTGAGGCGAACCGCtaaagggaACCTTCCTAGTATGGACGACcccgcggcgccggggcc | |||
| *********************************************************************** | ||||
| ..................................................>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000036735 ENSRNOG00000028742 D330017J20Rik | |||
| rat | (((.(((.(((((...((((..(((.((..((((....))))..))))).)).))..))))))))...))) | 0.620 -27.60 | ||
| rat | chromosome:4:56810139:56810209:1 | Same_strand|Boundary_non-coding|ENSRNOT00000036735|ENSRNOG00000028742 ## intergenic ## ENSRNOG00000028742|protein_coding|D330017J20Rik|RIKEN cDNA D330017J20 gene Gene [Source:MGI Symbol;Acc:MGI:2444363] |
sblock8916 [novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.335 | no | no | 0.52/0.61 | 18/21/0.20 | 0.0 0.5 | 0.0 0.5 | 1 4 | 0 0 | 1 2 | 0 0 | 3 36 | 15 -17 | 5arm 3arm_loop | 1 2 | nd nd | 0.33 0.72 | 3 10 | 5 | 2 | na | na |
| reads | miRBase family seed | |||
| seed | ----------------------------------------CAGCAGG---------------------------------------------- | 2 | miR-214 | |
| seed | ---------------------------------------ACAGCAG----------------------------------------------- | 2 | novel | |
| seed | ----GGUCACC---------------------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T3S1 | T4S2 | |||
| --------------------------------------TACAGCAGGCACAGGCAG------------------------------------- | 18 | - | 2 | |
| ---------------------------------------ACAGCAGGCACAGGCAGT------------------------------------ | 18 | 1 | 1 | |
| ---AGGTCACCTTCAGTGTAGGAG--------------------------------------------------------------------- | 21 | 1 | - | |
| rat | catAGGTCACCTTCAGTGTAGGAGcagcagtgtgggccTACAGCAGGCACAGGCAGTcacacctattctggttcttatttgcggtgctaatga | |||
| ********************************************************************************************* | ||||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000059917 ENSRNOG00000010852 NP_001102090.1 | |||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000014832 ENSRNOG00000010852 NP_001102090.1 | |||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000059915 ENSRNOG00000010852 NP_001102090.1 | |||
| rat | (((.((.((((..(((...((((.(((..(((((.((((...........))))...))))).....))).))))...))).)))))).))). | 0.910 -26.30 | ||
| rat | chromosome:4:62604698:62604790:1 | Same_strand|Intronic_non-coding|ENSRNOT00000059917|ENSRNOG00000010852 ## Same_strand|Intronic_coding|ENSRNOT00000059915|ENSRNOG00000010852 ## ENSRNOG00000010852|protein_coding|NP_001102090.1|nucleoporin 205kDa [Source:RefSeq_peptide;Acc:NP_001102090] |
sblock8971 [novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.899 | no | no | 0.52/0.63 | 19/21/0.50 | 0.0 0.0 | 0.0 0.0 | 1 1 | 0 0 | 1 1 | 0 0 | 16 37 | 21 -1 | 5arm 3arm | 3 3 | nd nd | 0.48 0.37 | 4 3 | 2 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | --------------------------------------------------------------GCGACCU------------------------------------------------ | 1 | novel |
| seed | -----------------GCCAUCU--------------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| ----------------GGCCATCTTCAGTGTTCCATG-------------------------------------------------------------------------------- | 21 | 1 | |
| -------------------------------------------------------------TGCGACCTGCCTGACTGGA------------------------------------- | 19 | 1 | |
| rat | tgtgttttccacctaaGGCCATCTTCAGTGTTCCATGaatcccagtttaagaaagagcacgTGCGACCTGCCTGACTGGAatttgtttgtgtacaagaagagacggggacagagaca | ||
| ********************************************************************************************************************* | |||
| rat | .((.((((((.((........(((((..(((..((..(((.((((((..((..((.((....))...))..)))))))).....)))..)).))).)))))...))))).))).)). | 0.780 -25.10 |
| rat | chromosome:4:119376104:119376220:1 | intergenic |
sblock9708 [novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.298 | no | no | 0.44/0.50 | 18/18/0.00 | 0.0 0.0 | 0.0 0.0 | 1 1 | 0 0 | 1 1 | 0 0 | 12 5 | -5 5 | 5arm_loop_3arm 3arm | 1 1 | nd nd | 0.44 0.33 | 5 3 | 2 | 2 | na | na |
| reads | miRBase family seed | |||
| seed | -------------AUGGGAA-------------------------------------- | 1 | novel | |
| seed | ------------------------------------AUCCCAA--------------- | 1 | novel | |
| len | cloning frequencies | |||
| T4S2 | T5S2 | |||
| ------------CATGGGAATCTGTGCTGA---------------------------- | 18 | 1 | - | |
| -----------------------------------TATCCCAACCCTTGTAGT----- | 18 | - | 1 | |
| rat | ggccatctgtggCATGGGAATCTGTGCTGAacctgTATCCCAACCCTTGTAGTggctg | |||
| ********************************************************** | ||||
| -------------------------------------------------------------------- | ENSRNOT00000015338 ENSRNOG00000011503 Shb | |||
| rat | (((((.(((.((..(((((((..((.....))..)).)))))..))...)))))))). | 0.990 -16.50 | ||
| rat | chromosome:5:62224253:62224310:1 | Opposite_strand|Intronic_non-coding|ENSRNOT00000015338|ENSRNOG00000011503 ## ENSRNOG00000011503|protein_coding|Shb|src homology 2 domain-containing transforming protein B Gene [Source:MGI (curated);Acc:Shb-001] |
sblock9960 [novel_lenNOK_multiarm_loopOverlap_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.689 | no | no | 0.56/0.74 | 18/21/0.29 | 0.3 0.0 0.3 | 1.0 0.0 0.0 | 3 1 3 | 0 0 0 | 2 1 2 | 0 0 0 | 0 18 37 | 30 16 -5 | 5arm 5arm 3arm_loop | 1 1 1 | nd nd nd | 0.47 0.50 0.39 | 6 3 3 | 7 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | --CGGGUCC-------------------------------------------------------------------------------------------------------------- | 2 | novel | ||
| seed | -----------------------------------------------------------------CUACCCG----------------------------------------------- | 2 | novel | ||
| seed | -CCGGGUC--------------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| seed | -------------------CCAUCGA--------------------------------------------------------------------------------------------- | 1 | miR-181a* | ||
| seed | ----------------------------------------------------------------ACUACCC------------------------------------------------ | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T3S1 | T4S2 | |||
| -CCGGGTCCGCAAAATCAGCCA------------------------------------------------------------------------------------------------- | 21 | - | - | 2 | |
| ----------------------------------------------------------------ACTACCCGGCAGCAGCGC------------------------------------- | 18 | - | 2 | - | |
| ---------------------------------------------------------------CACTACCCGGCAGCAGCGC------------------------------------- | 19 | - | - | 1 | |
| GCCGGGTCCGCAAAATCAG---------------------------------------------------------------------------------------------------- | 19 | 1 | - | - | |
| ------------------GCCATCGACTCGCACAAA----------------------------------------------------------------------------------- | 18 | - | 1 | - | |
| rat | GCCGGGTCCGCAAAATCAGCCATCGACTCGCACAAAgcagcgcgactccgggacagccgagaaCACTACCCGGCAGCAGCGCggcgacactccgtgcatcgtatgcccctgcgcccctg | ||||
| *********************************************************************************************************************** | |||||
| rat | ..((((..((((......((...(((...((((...((.((((..(((((((................))))).))..)))).))........)))).)))...))...))))..)))) | 0.640 -37.29 | |||
| rat | chromosome:6:32054394:32054512:-1 | intergenic ## {SimpF: oe = 0.82 -1 CpG} |
novel_lenNOK_multiarm_DicerNOK_Multihit_loopOverlap (169 loci)
sblock11025 [novel_lenNOK_multiarm_DicerNOK_Multihit_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.801 | no | no | 0.42/0.67 | 18/22/0.33 | 0.0 0.0 0.0 0.0 0.0 | 0.0 0.0 0.0 0.0 0.0 | 1 2 1 1 1 | 0 0 0 0 0 | 1 1 1 1 1 | 0 0 0 0 0 | 27 36 49 19 12 | 5 0 -14 -1 4 | 5arm 5arm 5arm_loop_3arm 3arm 3arm | 25 55 55 130 130 | nd nd nd nd nd | 0.50 0.50 0.42 0.11 0.05 | 9 5 5 1 1 | 6 | 5 | 0 | 0 |
| reads | miRBase family seed | ||||||
| seed | -------------------------------------GCAGUGC--------------------------------------------------- | 2 | novel | ||||
| seed | ----------------------------------------------------------------GAUGGUG------------------------ | 1 | novel | ||||
| seed | ----------------------------UCUUCUU------------------------------------------------------------ | 1 | novel | ||||
| seed | --------------------------------------------------CGUCUCA-------------------------------------- | 1 | novel | ||||
| seed | -----------------------------------------------------------GACAAGA----------------------------- | 1 | novel | ||||
| len | cloning frequencies | ||||||
| T1S1 | T2S2 | T4S2 | T5S1 | T5S2 | |||
| ------------------------------------TGCAGTGCCAGCCTCGTC----------------------------------------- | 18 | - | - | 2 | - | - | |
| ---------------------------------------------------------------AGATGGTGAAGGTCGGTGTG------------ | 20 | - | - | - | - | 1 | |
| -------------------------------------------------TCGTCTCATAGACAAGATG--------------------------- | 19 | - | - | - | 1 | - | |
| ---------------------------ATCTTCTTGTGCAGTGCCAGCC---------------------------------------------- | 22 | - | 1 | - | - | - | |
| ----------------------------------------------------------AGACAAGATGGTGAAGGT------------------- | 18 | 1 | - | - | - | - | |
| rat | gctcctccctgttctagagacagccgtATCTTCTTGTGCAGTGCCAGCCTCGTCTCATAGACAAGATGGTGAAGGTCGGTGTGaacggatttggc | ||||||
| *********************************************************************************************** | |||||||
| ......................................................................>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000051946 ENSRNOG00000037120 Q8K4T8_RAT | ||||||
| rat | (((.....((((((.....(((.(((.((((((.........((((..((.(((.....))).)).))))))))))))))))))))))....))) | 0.910 -24.60 | |||||
| rat | chromosome:7:121243282:121243376:-1 | Same_strand|Boundary_non-coding|ENSRNOT00000051946|ENSRNOG00000037120 ## intergenic ## ENSRNOG00000037120|protein_coding|Q8K4T8_RAT|Glyceraldehyde-3-phosphate-dehydrogenase (Fragment). [Source:UniProtKB/TrEMBL;Acc:Q8K4T8] |
sblock1137 [novel_lenNOK_multiarm_DicerNOK_Multihit_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.131 | no | no | 0.32/0.61 | 18/24/0.25 | 0.0 0.0 0.0 0.0 | 0.0 0.0 0.0 0.0 | 1 1 1 1 | 0 0 0 0 | 1 1 1 1 | 0 0 0 0 | 4 31 44 0 | 23 -10 -17 43 | 5arm 5arm_loop 5arm_loop_3arm 3arm | 16 16 16 16 | nd nd nd nd | 0.22 0.54 0.78 0.78 | 2 11 11 13 | 4 | 3 | -13 | 0 |
| reads | miRBase family seed | ||||
| seed | ----------------------------------------------------------------------------------------------------AGAAGGC----------- | 1 | novel | ||
| seed | --------------------------------UGUCAUC------------------------------------------------------------------------------- | 1 | novel | ||
| seed | ---------------------------------------------GUGGACA------------------------------------------------------------------ | 1 | novel | ||
| seed | -----UGACAUG---------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T3S1 | T5S1 | |||
| --------------------------------------------CGTGGACAAGAAGGCTGC-------------------------------------------------------- | 18 | - | - | 1 | |
| ----GTGACATGAGGCAGACAG------------------------------------------------------------------------------------------------ | 18 | 1 | - | - | |
| ---------------------------------------------------------------------------------------------------CAGAAGGCTAAATGAATAT | 19 | - | 1 | - | |
| -------------------------------GTGTCATCAAAGCCGTGGACAAGA--------------------------------------------------------------- | 24 | - | 1 | - | |
| rat | atttGTGACATGAGGCAGACAGttgctgtagGTGTCATCAAAGCCGTGGACAAGAAGGCTGCaggagatggcaaagtcaccacgtctgcccagaaaactCAGAAGGCTAAATGAATAT | ||||
| ********************************************************************************************************************** | |||||
| -------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000041441 ENSRNOG00000011058 Utrn | ||||
| -------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000016273 ENSRNOG00000011058 Utrn | ||||
| rat | .(((.(((..((.(((((((.((.(((.....(((((((..((((...........))))......))))))).))).))...)))))))))......))).)))............. | 0.880 -30.90 | |||
| rat | chromosome:1:7575132:7575249:1 | Opposite_strand|Boundary_non-coding|ENSRNOT00000015208|ENSRNOG00000011058 ## Opposite_strand|Intronic_coding|ENSRNOT00000016273|ENSRNOG00000011058 ## Opposite_strand|Intronic_non-coding|ENSRNOT00000041441|ENSRNOG00000011058 ## ENSRNOG00000011058|protein_coding|Utrn|utrophin [Source:RefSeq_peptide;Acc:NP_037202] |
sblock11883 [novel_lenNOK_multiarm_DicerNOK_Multihit_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.576 | no | no | 0.42/0.67 | 18/22/0.33 | 0.0 1.0 0.0 0.0 0.0 0.0 0.0 | 0.0 1.0 0.0 0.0 0.0 0.0 0.0 | 1 2 1 2 1 1 1 | 0 0 0 0 0 0 0 | 1 2 1 1 1 1 1 | 0 0 0 0 0 0 0 | 6 10 16 25 38 13 6 | 19 11 5 0 -14 -1 4 | 5arm 5arm 5arm 5arm 5arm_loop_3arm 3arm 3arm | 18 18 25 55 55 130 130 | nd nd nd nd nd nd nd | 0.33 0.50 0.50 0.50 0.42 0.11 0.15 | 3 9 9 5 5 1 2 | 9 | 6 | 0 | 0 |
| reads | miRBase family seed | |||||||
| seed | --------------------------GCAGUGC--------------------------------------------- | 2 | novel | |||||
| seed | -------------CGCAUCU---------------------------------------------------------- | 1 | novel | |||||
| seed | -----------------------------------------------------GAUGGUG------------------ | 1 | novel | |||||
| seed | -------GACAGCC---------------------------------------------------------------- | 1 | novel | |||||
| seed | -----------------UCUUCUU------------------------------------------------------ | 1 | novel | |||||
| seed | ------------------------------------------------GACAAGA----------------------- | 1 | novel | |||||
| seed | -----------GCCGCAU------------------------------------------------------------ | 1 | novel | |||||
| seed | ---------------------------------------CGUCUCA-------------------------------- | 1 | novel | |||||
| len | cloning frequencies | |||||||
| T1S1 | T2S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| -------------------------TGCAGTGCCAGCCTCGTC----------------------------------- | 18 | - | - | - | 2 | - | - | |
| --------------------------------------TCGTCTCATAGACAAGATG--------------------- | 19 | - | - | - | - | 1 | - | |
| ------------CCGCATCTTCTTGTGCAG------------------------------------------------ | 18 | 1 | - | - | - | - | - | |
| ----------------ATCTTCTTGTGCAGTGCCAGCC---------------------------------------- | 22 | - | 1 | - | - | - | - | |
| ----------------------------------------------------AGATGGTGAAGGTCGGTGTG------ | 20 | - | - | - | - | - | 1 | |
| ------AGACAGCCGCATCTTCTT------------------------------------------------------ | 18 | 1 | - | - | - | - | - | |
| ----------AGCCGCATCTTCTTGTGCAGTG---------------------------------------------- | 22 | - | - | 1 | - | - | - | |
| -----------------------------------------------AGACAAGATGGTGAAGGT------------- | 18 | 1 | - | - | - | - | - | |
| rat | ttccagAGACAGCCGCATCTTCTTGTGCAGTGCCAGCCTCGTCTCATAGACAAGATGGTGAAGGTCGGTGTGaacgga | |||||||
| ****************************************************************************** | ||||||||
| ...........................................................>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000045094 ENSRNOG00000032052 | |||||||
| rat | .(((....(((.(((.((((((.........((((..((.(((.....))).)).))))))))))))))))....))) | 0.900 -20.60 | ||||||
| rat | chromosome:8:105553535:105553612:-1 | Same_strand|Boundary_non-coding|ENSRNOT00000045094|ENSRNOG00000032052 ## intergenic ## ENSRNOG00000032052|pseudogene|| |
sblock11977 [novel_lenNOK_multiarm_DicerNOK_Multihit_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.254 | no | no | 0.61/0.67 | 18/18/0.00 | 0.0 0.0 | 0.0 0.0 | 1 1 | 0 0 | 1 1 | 0 0 | 15 31 | 5 -10 | 5arm 3arm_loop | 13 13 | nd nd | 0.17 0.56 | 1 9 | 2 | 2 | 0 | -15 |
| reads | miRBase family seed | |||
| seed | ------------------------------------------GGCAUGG----------------------------------------- | 1 | novel | |
| seed | ----------------CACAGCU------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T3S1 | T4S2 | |||
| ---------------GCACAGCTGGGCCTACAC--------------------------------------------------------- | 18 | 1 | - | |
| -----------------------------------------AGGCATGGGACTTGGGTG------------------------------- | 18 | - | 1 | |
| rat | gtggtctcgtcatcaGCACAGCTGGGCCTACACgcaaggtgAGGCATGGGACTTGGGTGttggtgcgtggccggtgtggtgcaggggtca | |||
| ****************************************************************************************** | ||||
| rat | .((..(((..(((((.(((.((((.((((((((.((((.............)))).)))).)).)).))))..))))))))..)))..)) | 0.960 -33.82 | ||
| rat | chromosome:8:43784072:43784161:1 | intergenic ## {SimpF: oe = 0.81 1 CpG} |
| Back to summary page | other hairpins: | Page 1 | Jump 10 pages back | Previous page | Page 29864 | Next page | Jump 10 pages forward | Page 31204 |
©2008 InteRNA Genomics B.V.