other hairpins
novel_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap (127 loci)
sblock9744 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.660 | no | no | 0.55/0.74 | 19/22/0.60 | 1.5 0.0 | 0.5 0.0 | 4 1 | 0 0 | 3 1 | 0 0 | 6 0 | -2 -3 | 5arm_loop 3arm_loop | 1 1 | nd nd | 0.47 0.22 | 6 2 | 5 | 3 | 0 | 0 |
| reads | miRBase family seed | ||||
| seed | ---------GCACAUG----------------------------------- | 3 | novel | ||
| seed | ---------------------------------GUGCCCU----------- | 1 | novel | ||
| seed | -------CUGCACA------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S2 | T4S2 | T5S1 | |||
| --------TGCACATGTGAGTCTGGGCT----------------------- | 20 | - | 1 | - | |
| --------------------------------GGTGCCCTGCTTGCCCCTC | 19 | - | 1 | - | |
| --------TGCACATGTGAGTCTGGGCTG---------------------- | 21 | - | - | 1 | |
| ------TCTGCACATGTGAGTCTGGGCT----------------------- | 22 | - | - | 1 | |
| --------TGCACATGTGAGTCTGGGC------------------------ | 19 | 1 | - | - | |
| rat | gaggccTCTGCACATGTGAGTCTGGGCTGtgtGGTGCCCTGCTTGCCCCTC | ||||
| *************************************************** | |||||
| rat | ((((...........((((((..((((........)))).)))))).)))) | 0.580 -14.50 | |||
| rat | chromosome:5:79248979:79249029:1 | intergenic |
sblock9775 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.385 | no | no | 0.50/0.71 | 18/21/0.50 | 0.0 0.0 2.5 | 0.0 0.0 1.5 | 1 1 2 | 0 0 0 | 1 1 2 | 0 0 0 | 25 25 6 | 11 -1 15 | 5arm 3arm 3arm | 1 1 1 | nd nd nd | 0.56 0.19 0.57 | 10 2 8 | 4 | 3 | -10 | 0 |
| reads | miRBase family seed | ||||
| seed | --------------------------UAGUGAU--------------------------------------------------------------------- | 1 | novel | ||
| seed | -------------------------------------------------------------------------CGGUGCU---------------------- | 1 | novel | ||
| seed | ------------------------------------------------------------------------------CUCGAAC----------------- | 1 | novel | ||
| seed | ---------------------------------------------------------GCGUGGC-------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T3S1 | T3S2 | |||
| -------------------------GTAGTGATCGAGCTCTGA----------------------------------------------------------- | 18 | - | - | 1 | |
| -----------------------------------------------------------------------------GCTCGAACCCCAATAGTCC------ | 19 | 1 | - | - | |
| ------------------------------------------------------------------------GCGGTGCTCGAACCCCAATAG--------- | 21 | - | 1 | - | |
| --------------------------------------------------------AGCGTGGCGCTCCAGAGCGGT------------------------- | 21 | - | - | 1 | |
| rat | agctgcacttcccaagtggtagagcGTAGTGATCGAGCTCTGAgcgctctctgcccAGCGTGGCGCTCCAGAGCGGTGCTCGAACCCCAATAGTCCtgcggc | ||||
| ****************************************************************************************************** | |||||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000057987 ENSRNOG00000006966 Nfia | ||||
| rat | .((((((..........(((.(((((..........((((((((((((...(((...))).))))))).)))))..)))))..)))..........)))))) | 0.530 -35.45 | |||
| rat | chromosome:5:118132290:118132391:1 | Same_strand|Boundary_non-coding|ENSRNOT00000009505|ENSRNOG00000006966 ## Same_strand|Intronic_coding|ENSRNOT00000057987|ENSRNOG00000006966 ## ENSRNOG00000006966|protein_coding|Nfia|Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A) (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein). [Source:UniProtKB/Swiss-Prot;Acc:P09414] |
sblock9792 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.101 | no | no | 0.61/0.80 | 18/20/0.17 | 0.0 1.5 0.0 0.0 0.0 | 0.0 1.0 0.0 0.0 0.0 | 1 2 1 1 1 | 0 0 0 0 0 | 1 1 1 1 1 | 0 0 0 0 0 | 10 33 44 27 24 | 27 1 -7 10 15 | 5arm 5arm 5arm_loop_3arm 3arm 3arm | 1 2 2 2 2 | nd nd nd nd nd | 0.56 0.21 0.28 0.25 0.28 | 6 2 5 2 3 | 6 | 5 | 8 | 10 |
| reads | miRBase family seed | ||||||
| seed | -----------------------------------------------------------------------CCGCCGC--------------------------------------- | 1 | novel | ||||
| seed | -----------CUGCCAA--------------------------------------------------------------------------------------------------- | 1 | novel | ||||
| seed | ----------------------------------GGCUGGA---------------------------------------------------------------------------- | 1 | novel | ||||
| seed | ----------------------------------------------------------------------------GCAGCCA---------------------------------- | 1 | novel | ||||
| seed | -------------------------------------UGGAGCU------------------------------------------------------------------------- | 1 | novel | ||||
| seed | ---------------------------------------------UGGCCCG----------------------------------------------------------------- | 1 | novel | ||||
| len | cloning frequencies | ||||||
| T1S1 | T1S2 | T3S2 | T5S1 | T5S2 | |||
| ---------------------------------------------------------------------------CGCAGCCAGCACGTCCAG------------------------ | 18 | - | - | - | 1 | - | |
| ----------GCTGCCAAAGGGGAAGTG----------------------------------------------------------------------------------------- | 18 | - | 1 | - | - | - | |
| ----------------------------------------------------------------------GCCGCCGCAGCCAGCACGTC--------------------------- | 20 | 1 | - | - | - | - | |
| ---------------------------------AGGCTGGAGCTATGGCCCG----------------------------------------------------------------- | 19 | - | - | - | - | 1 | |
| ------------------------------------CTGGAGCTATGGCCCGGG--------------------------------------------------------------- | 18 | - | - | - | - | 1 | |
| --------------------------------------------ATGGCCCGGGTTTGGAGC------------------------------------------------------- | 18 | - | - | 1 | - | - | |
| rat | gccccgggccGCTGCCAAAGGGGAAGTGagctaAGGCTGGAGCTATGGCCCGGGTTTGGAGCctgcggccGCCGCCGCAGCCAGCACGTCCAGagaagccgcggccggagcaggggc | ||||||
| ********************************************************************************************************************* | |||||||
| rat | (((((.((((((.((......(((.((..(((..(((((..((..((((((((((.....))))).)))))..))..)))))))))).)))......)).))))))......))))) | 0.960 -59.40 | |||||
| rat | chromosome:5:136000976:136001092:1 | intergenic |
sblock9794 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.158 | no | no | 0.47/0.76 | 18/21/0.29 | 0.0 1.4 0.0 | 0.0 0.8 0.0 | 1 5 1 | 0 0 0 | 1 4 1 | 0 0 0 | 14 23 19 | 13 -1 7 | 5arm 3arm 3arm | 1 1 1 | nd nd nd | 0.17 0.16 0.26 | 1 1 3 | 7 | 4 | -11 | -9 |
| reads | miRBase family seed | |||||
| seed | -------------------------------------------------CCGGCGC-------------------------------------- | 3 | novel | |||
| seed | ---------------------------------------------------GGCGCUG------------------------------------ | 1 | novel | |||
| seed | ------------------------------------------------------GCUGUCG--------------------------------- | 1 | novel | |||
| seed | ---------------------------------------------------------GUCGUGG------------------------------ | 1 | novel | |||
| seed | ---------------UAGUGGU------------------------------------------------------------------------ | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S1 | T3S1 | T3S2 | T5S2 | |||
| ------------------------------------------------GCCGGCGCTGTCGTGGTTGCC------------------------- | 21 | - | - | 2 | - | |
| ------------------------------------------------GCCGGCGCTGTCGTGGTTG--------------------------- | 19 | - | - | - | 1 | |
| --------------------------------------------------CGGCGCTGTCGTGGTTGCC------------------------- | 19 | - | 1 | - | - | |
| --------------------------------------------------------TGTCGTGGTTGCCTTTACT------------------- | 19 | - | - | 1 | - | |
| --------------CTAGTGGTTGGAGCCAGG-------------------------------------------------------------- | 18 | 1 | - | - | - | |
| -----------------------------------------------------CGCTGTCGTGGTTGCCTT----------------------- | 18 | 1 | - | - | - | |
| rat | gttaaaatgaaactCTAGTGGTTGGAGCCAGGgcagagcgtgaggggaGCCGGCGCTGTCGTGGTTGCCTTTACTactcgggcacagtcgagcc | |||||
| ********************************************************************************************** | ||||||
| rat | (((....((...(((.((((((.(((((((.(((..(((((..((....)).)))))))).))))).))...)))))).)))..))....))). | 0.970 -33.80 | ||||
| rat | chromosome:5:136496797:136496890:1 | intergenic |
sblock9985 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.685 | no | no | 0.61/0.74 | 18/23/0.44 | 0.0 1.8 1.0 0.0 0.0 | 0.0 1.5 0.5 0.0 0.0 | 1 4 2 1 1 | 0 0 0 0 0 | 1 2 2 1 1 | 0 0 0 0 0 | 35 42 49 25 10 | -1 -8 -15 4 16 | 5arm_loop 5arm_loop_3arm 5arm_loop_3arm 3arm 3arm | 1 1 1 1 1 | nd nd nd nd nd | 0.29 0.47 0.56 0.10 0.13 | 2 7 8 2 1 | 9 | 5 | 0 | 11 |
| reads | miRBase family seed | ||||||
| seed | ---------------------------------------------GGCUGGA------------------------------------------------------------ | 2 | novel | ||||
| seed | --------------------------------------------------------------------------------GGGCUGG------------------------- | 1 | novel | ||||
| seed | ----------------------------------------------------UCCUGGA----------------------------------------------------- | 1 | novel | ||||
| seed | --------------------------------------------------------------------UGGCCGG------------------------------------- | 1 | novel | ||||
| seed | --------------------------------------------------GAUCCUG------------------------------------------------------- | 1 | novel | ||||
| seed | ----------------------------------------------GCUGGAU----------------------------------------------------------- | 1 | novel | ||||
| seed | -------------------------------------------CUGGCUG-------------------------------------------------------------- | 1 | novel | ||||
| seed | ------------------------------------UCGGCUG--------------------------------------------------------------------- | 1 | novel | ||||
| len | cloning frequencies | ||||||
| T1S1 | T2S2 | T3S1 | T3S2 | T5S2 | |||
| --------------------------------------------TGGCTGGATCCTGGACCAC------------------------------------------------- | 19 | 1 | - | - | 1 | - | |
| -------------------------------------------------------------------------------CGGGCTGGTGGCGCAGTGCAGAC---------- | 23 | - | - | - | 1 | - | |
| ---------------------------------------------------ATCCTGGACCACGGAGGT------------------------------------------- | 18 | - | - | 1 | - | - | |
| -------------------------------------------------------------------GTGGCCGGTAAACGGGCTGG------------------------- | 20 | - | - | - | - | 1 | |
| ------------------------------------------GCTGGCTGGATCCTGGACC--------------------------------------------------- | 19 | 1 | - | - | - | - | |
| ---------------------------------------------GGCTGGATCCTGGACCAC------------------------------------------------- | 18 | 1 | - | - | - | - | |
| -------------------------------------------------GGATCCTGGACCACGGAGGTG------------------------------------------ | 21 | - | 1 | - | - | - | |
| -----------------------------------CTCGGCTGCTGGCTGGATCCT-------------------------------------------------------- | 21 | 1 | - | - | - | - | |
| rat | cggaggcgggggttgggccgcgcgcgatccgggacCTCGGCTGCTGGCTGGATCCTGGACCACGGAGGTGGCCGGTAAACGGGCTGGTGGCGCAGTGCAGACtgcgtgctgg | ||||||
| **************************************************************************************************************** | |||||||
| rat | (((..(((.((.(((.((.((((.((..((((...((((..(((((((((..(((........)))..)))))))))..)))))))))))))).)).))).)).))).))). | 0.400 -48.50 | |||||
| rat | chromosome:6:53726846:53726957:-1 | intergenic |
novel_lenNOK_multiarm_DicerNOK_randfoldOK (119 loci)
sblock1003 [novel_lenNOK_multiarm_DicerNOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.63/0.70 | 19/22/0.40 | 0.0 0.5 0.0 | 0.0 0.5 0.0 | 2 2 1 | 0 0 0 | 1 2 1 | 0 0 0 | 11 27 9 | 23 2 23 | 5arm 3arm 3arm | 1 1 1 | nd nd nd | 0.32 0.10 0.32 | 3 1 3 | 5 | 4 | -19 | -16 |
| reads | miRBase family seed | |||||
| seed | ------------GUACUGC------------------------------------------------------------------------------------------------ | 2 | novel | |||
| seed | -------------------------------------------------------------------UGUCCUC----------------------------------------- | 1 | novel | |||
| seed | --------------------------------------------------------------------GUCCUCU---------------------------------------- | 1 | novel | |||
| seed | ----------------------------------------------------------------------------------------AGAGCUG-------------------- | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S1 | T1S2 | T3S2 | T4S1 | |||
| -----------GGTACTGCACAGCCCTGGA------------------------------------------------------------------------------------- | 19 | - | 2 | - | - | |
| -------------------------------------------------------------------TGTCCTCTGCCCGCCTTCCC---------------------------- | 20 | - | - | 1 | - | |
| ------------------------------------------------------------------ATGTCCTCTGCCCGCCTTCCCC--------------------------- | 22 | 1 | - | - | - | |
| ---------------------------------------------------------------------------------------CAGAGCTGGGCACTTCCTC--------- | 19 | - | - | - | 1 | |
| rat | ggcccagtgggGGTACTGCACAGCCCTGGAgagggtgagcagtgggaccctggctccctccataccATGTCCTCTGCCCGCCTTCCCCAGAGCTGGGCACTTCCTCccatgagct | |||||
| ******************************************************************************************************************* | ||||||
| rat | (((...(((((((...(((.((((.((((.(((((((.((((.(((((..(((...........))).))))))))).))))))).)))).)))).)))...)).)))))..))) | 1.000 -57.80 | ||||
| rat | chromosome:1:209958538:209958652:-1 | intergenic |
sblock10043 [novel_lenNOK_multiarm_DicerNOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.002 | no | no | 0.58/0.71 | 19/21/0.50 | 0.0 0.0 | 0.0 0.0 | 1 1 | 0 0 | 1 1 | 0 0 | 6 22 | 24 6 | 5arm 3arm | 1 1 | nd nd | 0.53 0.24 | 4 2 | 2 | 2 | -18 | -16 |
| reads | miRBase family seed | |||
| seed | -----------------------------------------------------------------ACCUGCC----------------------------------- | 1 | novel | |
| seed | -------GGAAGCA--------------------------------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T2S1 | T3S2 | |||
| ----------------------------------------------------------------CACCTGCCCTGCCTCTCCCCT---------------------- | 21 | 1 | - | |
| ------TGGAAGCAGGGAGCCTTAG---------------------------------------------------------------------------------- | 19 | - | 1 | |
| rat | ctcggcTGGAAGCAGGGAGCCTTAGggactggcagggcacagtggctccagggtgtgcggagacCACCTGCCCTGCCTCTCCCCTggccactgccaattgtcagagc | |||
| *********************************************************************************************************** | ||||
| --------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000058181 ENSRNOG00000008082 RGS6_RAT | |||
| --------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000035753 ENSRNOG00000008082 RGS6_RAT | |||
| rat | ((((((.....((((...(((...((((..(((((((((..((((((((.........)))).)))).)))))))))..))))..)))..)))).....))).))). | 1.000 -55.40 | ||
| rat | chromosome:6:106933548:106933654:-1 | Opposite_strand|Boundary_non-coding|ENSRNOT00000058180|ENSRNOG00000008082 ## Opposite_strand|Intronic_coding|ENSRNOT00000058181|ENSRNOG00000008082 ## ENSRNOG00000008082|protein_coding|RGS6_RAT|Regulator of G-protein signaling 6 (RGS6) (Fragment). [Source:UniProtKB/Swiss-Prot;Acc:P49801] |
sblock10051 [novel_lenNOK_multiarm_DicerNOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.002 | no | no | 0.22/0.33 | 18/19/0.00 | 0.2 0.0 | 0.5 0.0 | 4 1 | 0 0 | 3 1 | 0 0 | 20 12 | 20 14 | 5arm 3arm | 2 2 | nd nd | 0.56 0.11 | 8 1 | 5 | 4 | 0 | 0 |
| reads | miRBase family seed | |||||
| seed | ----------------------AGAAAUA-------------------------------------------------------------------------------- | 3 | novel | |||
| seed | ---------------------UAGAAAU--------------------------------------------------------------------------------- | 1 | novel | |||
| seed | --------------------------------------------------------------------------------UUUUUAC---------------------- | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S1 | T3S1 | T3S2 | T4S2 | |||
| ---------------------TAGAAATACAGTGTGAGA---------------------------------------------------------------------- | 18 | - | - | 2 | - | |
| -------------------------------------------------------------------------------TTTTTTACCCTACAAAAA------------ | 18 | 1 | - | - | - | |
| ---------------------TAGAAATACAGTGTGAGAT--------------------------------------------------------------------- | 19 | - | 1 | - | - | |
| --------------------TTAGAAATACAGTGTGAG----------------------------------------------------------------------- | 18 | - | - | - | 1 | |
| rat | aatgtgttgatgtttttgttTTAGAAATACAGTGTGAGATttaatattagtataattgagcctcccttgatccctgattTTTTTTACCCTACAAAAAtatcagcatgtt | |||||
| ************************************************************************************************************* | ||||||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000015545 ENSRNOG00000011419 Aldh6a1 | |||||
| rat | (((((((((((((((((((...........((.((((((......(((((....((..((.....))..))..)))))...)))))).))))))))))))))))))))) | 0.450 -25.10 | ||||
| rat | chromosome:6:108510880:108510988:-1 | Same_strand|Intronic_coding|ENSRNOT00000015545|ENSRNOG00000011419 ## ENSRNOG00000011419|protein_coding|Aldh6a1|Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (EC 1.2.1.27) (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18). [Source:UniProtKB/Swiss-Prot;Acc:Q02253] ## {Repeats: dust 108510904 108510910 0 class=dust} |
sblock10254 [novel_lenNOK_multiarm_DicerNOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.44/0.56 | 18/18/0.00 | 0.0 0.0 | 0.0 0.0 | 1 2 | 0 0 | 1 1 | 0 0 | 6 14 | 16 4 | 5arm 3arm | 2 2 | nd nd | 0.28 0.28 | 3 3 | 3 | 2 | -10 | -10 |
| reads | miRBase family seed | |||
| seed | ---------------------------------------------------------------------UUUCCCC------------------------ | 2 | novel | |
| seed | -------AAGGGUU-------------------------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T3S2 | T4S2 | |||
| --------------------------------------------------------------------CTTTCCCCAGACATCCCA-------------- | 18 | 2 | - | |
| ------AAAGGGTTAAAGGGGTGT---------------------------------------------------------------------------- | 18 | - | 1 | |
| rat | gcagtgAAAGGGTTAAAGGGGTGTtaaaggggtttggtttaaaaaaaaaaaaaaaaaaaaaaaaaagcCTTTCCCCAGACATCCCAaatctgtaagggca | |||
| **************************************************************************************************** | ||||
| rat | ((..((...(((((...((((((((...((((...(((((........................)))))...)))).)))))))).))))).))...)). | 1.000 -27.26 | ||
| rat | chromosome:6:26174591:26174690:1 | intergenic |
sblock1031 [novel_lenNOK_multiarm_DicerNOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.006 | no | no | 0.44/0.61 | 18/18/0.00 | 0.0 0.0 | 0.0 0.0 | 1 1 | 0 0 | 1 1 | 0 0 | 5 19 | 32 15 | 5arm 3arm | 1 1 | nd nd | 0.28 0.11 | 3 2 | 2 | 2 | -12 | -11 |
| reads | miRBase family seed | |||
| seed | ----------------------------------------------------------------------------AUACUAC----------------------------- | 1 | novel | |
| seed | ------CACAGUG--------------------------------------------------------------------------------------------------- | 1 | miR-128 | |
| len | cloning frequencies | |||
| T1S2 | T5S2 | |||
| -----TCACAGTGGGTGGGCAAG----------------------------------------------------------------------------------------- | 18 | - | 1 | |
| ---------------------------------------------------------------------------CATACTACATGACTGCTC------------------- | 18 | 1 | - | |
| rat | ctaacTCACAGTGGGTGGGCAAGtcctagttagatatgtgggttctgaaggtctgttcttcacccttcagctcgtCATACTACATGACTGCTCaagccttagtagagttagg | |||
| **************************************************************************************************************** | ||||
| rat | (((((((((...((.(((((.((((...((.((.((((((((..(((((((..((.....)).))))))))))).))))))))..)))))))))..))...)).))))))). | 1.000 -38.80 | ||
| rat | chromosome:1:222025232:222025343:-1 | intergenic |
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