other hairpins
novel_lenNOK_cloningOK_multiarm_5varHIGH_loopOverlap_nonpairedHIGH_bulgeHIGH (29 loci)
block1723164 [novel_lenNOK_cloningOK_multiarm_5varHIGH_loopOverlap_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.214 | no | no | 0.39/0.53 | 18/25/0.67 | 3.0 5.5 | 5.8 5.2 | 5 13 | 0 0 | 4 1 | 0 0 | 8 20 | 2 -17 | 5arm 5arm_loop_3arm | 2 2 | nd nd | 0.45 0.40 | 7 5 | 18 | 4 | na | na |
| reads | miRBase family seed | |||||
| seed | -------------------------------GUGCGAU------------------------- | 4 | novel | |||
| seed | --------------------------CUUAUGU------------------------------ | 2 | novel | |||
| seed | ----------------------GACUCUU---------------------------------- | 2 | novel | |||
| seed | -----------------------------AUGUGCG--------------------------- | 2 | novel | |||
| seed | -----------AUUUACC--------------------------------------------- | 2 | novel | |||
| seed | ---------------------AGACUCU----------------------------------- | 2 | novel | |||
| seed | ----------------------------------CGAUCAC---------------------- | 1 | novel | |||
| seed | ---------ACAUUUA----------------------------------------------- | 1 | novel | |||
| seed | --------------UACCCGA------------------------------------------ | 1 | novel | |||
| seed | ---------------ACCCGAA----------------------------------------- | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S1 | T1S2 | T4S2 | T5S1 | |||
| ------------------------------TGTGCGATCACTATGCTGC-------------- | 19 | - | - | - | 2 | |
| ---------------------AGACTCTTATGTGCGATCACT--------------------- | 21 | - | - | - | 2 | |
| ----------CATTTACCCGAAGACTCTTATGTG----------------------------- | 24 | 1 | - | - | 1 | |
| -------------------------TCTTATGTGCGATCACTATG------------------ | 20 | - | - | - | 2 | |
| --------TACATTTACCCGAAGACT------------------------------------- | 18 | - | 1 | - | - | |
| ---------------------------------GCGATCACTATGCTGCATC----------- | 19 | - | - | - | 1 | |
| ------------------------------TGTGCGATCACTATGCTGCA------------- | 20 | - | - | - | 1 | |
| -------------TTACCCGAAGACTCTTAT-------------------------------- | 18 | - | - | 1 | - | |
| --------------------AAGACTCTTATGTGCGATCA----------------------- | 20 | - | - | - | 1 | |
| --------------TACCCGAAGACTCTTATGTG----------------------------- | 20 | - | - | - | 1 | |
| ----------------------------TATGTGCGATCACTATGCTG--------------- | 20 | - | - | - | 1 | |
| ------------------------------TGTGCGATCACTATGCTGCATCT---------- | 23 | - | - | - | 1 | |
| --------------------AAGACTCTTATGTGCGATCACT--------------------- | 22 | - | - | - | 1 | |
| ----------------------------TATGTGCGATCACTATGCTGCATCT---------- | 25 | - | - | - | 1 | |
| rat | gagttcatTACATTTACCCGAAGACTCTTATGTGCGATCACTATGCTGCATCTgagtcgactc | |||||
| *************************************************************** | ||||||
| ------------------------------------------------------------------------- | ENSRNOT00000047859 ENSRNOG00000024953 LOC678820 | |||||
| rat | (((((.................(((((..(((((((.......))).))))..)))))))))) | 0.700 -12.22 | ||||
| rat | chromosome:5:25427815:25427877:-1 | Opposite_strand|Boundary_non-coding|ENSRNOT00000041129|ENSRNOG00000024953 ## Opposite_strand|Intronic_coding|ENSRNOT00000047859|ENSRNOG00000024953 ## ENSRNOG00000024953|protein_coding|LOC678820| |
sblock9428 [novel_lenNOK_cloningOK_multiarm_5varHIGH_loopOverlap_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.280 | no | no | 0.24/0.53 | 18/25/0.50 | 4.8 0.0 0.6 | 5.6 0.8 0.0 | 12 4 10 | 0 0 0 | 4 2 2 | 0 0 0 | 0 52 61 | 32 -10 -18 | 5arm 5arm_loop_3arm 3arm_loop | 1 1 1 | nd nd nd | 0.48 0.68 0.38 | 5 4 4 | 32 | 6 | na | na |
| reads | miRBase family seed | |||||||
| seed | --------------------------------------------------------------AGAGUUC----------------------------------------------- | 10 | novel | |||||
| seed | ----------------------------------------------------------------AGUUCUU--------------------------------------------- | 5 | novel | |||||
| seed | -AGUCACA------------------------------------------------------------------------------------------------------------ | 5 | novel | |||||
| seed | -----------GUUCCUU-------------------------------------------------------------------------------------------------- | 4 | novel | |||||
| seed | -----------------------------------------------------ACAGUCC-------------------------------------------------------- | 4 | novel | |||||
| seed | ---UCACACC---------------------------------------------------------------------------------------------------------- | 2 | novel | |||||
| seed | -----------------------------------------------------------------GUUCUUU-------------------------------------------- | 1 | novel | |||||
| seed | --------------CCUUGCU----------------------------------------------------------------------------------------------- | 1 | novel | |||||
| len | cloning frequencies | |||||||
| T1S1 | T3S1 | T3S2 | T4S2 | T5S1 | T5S2 | |||
| -------------------------------------------------------------TAGAGTTCTTTTTACAGTTGA---------------------------------- | 21 | - | - | - | - | 7 | - | |
| CAGTCACACCTGTTCCTTG------------------------------------------------------------------------------------------------- | 19 | - | 1 | - | 1 | 3 | - | |
| ----------TGTTCCTTGCTATGTCCACA-------------------------------------------------------------------------------------- | 20 | 1 | - | - | - | 3 | - | |
| ----------------------------------------------------TACAGTCCCTAGAGTTCTTTTT------------------------------------------ | 22 | - | - | - | - | 2 | 1 | |
| ---------------------------------------------------------------GAGTTCTTTTTACAGTTGA---------------------------------- | 19 | - | - | - | - | 3 | - | |
| -------------------------------------------------------------TAGAGTTCTTTTTACAGT------------------------------------- | 18 | - | - | 1 | - | - | - | |
| ---------------------------------------------------------------GAGTTCTTTTTACAGTTG----------------------------------- | 18 | - | - | - | - | 1 | - | |
| ----------------------------------------------------------------AGTTCTTTTTACAGTTGAA--------------------------------- | 19 | - | - | - | - | 1 | - | |
| ----------------------------------------------------TACAGTCCCTAGAGTTCTT--------------------------------------------- | 19 | - | - | - | - | 1 | - | |
| -------------------------------------------------------------TAGAGTTCTTTTTACAGTTG----------------------------------- | 20 | - | - | - | - | 1 | - | |
| -------------TCCTTGCTATGTCCACATT------------------------------------------------------------------------------------ | 19 | - | - | - | - | 1 | - | |
| ---------------------------------------------------------------GAGTTCTTTTTACAGTTGAAAAAG----------------------------- | 24 | - | - | - | - | 1 | - | |
| --GTCACACCTGTTCCTTGCTATGTCC----------------------------------------------------------------------------------------- | 25 | - | - | - | - | 1 | - | |
| -------------------------------------------------------------TAGAGTTCTTTTTACAGTTGAAAAA------------------------------ | 25 | - | - | - | - | 1 | - | |
| --GTCACACCTGTTCCTTGCT----------------------------------------------------------------------------------------------- | 19 | - | - | - | - | 1 | - | |
| rat | CAGTCACACCTGTTCCTTGCTATGTCCACAttttggaccacttttctcagtctacagtcccTAGAGTTCTTTTTACAGTTGAaaaagtggcccgacactaagtaaaagcttcagga | |||||||
| ******************************************************************************************************************** | ||||||||
| rat | ........((((....(((((.((((........((.((((((((.((((.((...((....((....))....)))))))))))))))).))))))...)))))......)))). | 0.470 -22.40 | ||||||
| rat | chromosome:5:114555675:114555790:-1 | intergenic |
sblock9464 [novel_lenNOK_cloningOK_multiarm_5varHIGH_loopOverlap_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.527 | no | no | 0.28/0.45 | 18/26/0.45 | 1.8 0.0 0.0 0.0 | 0.8 0.0 0.8 0.0 | 5 1 4 1 | 0 0 0 0 | 2 1 2 1 | 0 0 0 0 | 0 13 18 12 | 9 -1 -7 3 | 5arm 5arm_loop 3arm_loop 3arm | 1 1 1 1 | nd nd nd nd | 0.47 0.39 0.50 0.44 | 3 4 6 4 | 11 | 4 | na | na |
| reads | miRBase family seed | |||||
| seed | -------------------------------------GACAGCC-------------------------------- | 4 | novel | |||
| seed | -UAUACUG-------------------------------------------------------------------- | 3 | novel | |||
| seed | ----ACUGCAC----------------------------------------------------------------- | 1 | novel | |||
| seed | --------------ACUACCU------------------------------------------------------- | 1 | novel | |||
| seed | -----------------------------------------------CAAUUAA---------------------- | 1 | novel | |||
| seed | -------GCACUAU-------------------------------------------------------------- | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S2 | T4S1 | T4S2 | T5S1 | |||
| TTATACTGCACTATACTACCTCTCCA-------------------------------------------------- | 26 | - | - | - | 3 | |
| ------------------------------------TGACAGCCCCTCAATTAAATGA------------------ | 22 | - | - | 1 | 2 | |
| ------TGCACTATACTACCTCTCCA-------------------------------------------------- | 20 | - | - | - | 1 | |
| ----------------------------------------------TCAATTAAATGATCTCAG------------ | 18 | - | - | - | 1 | |
| ------------------------------------TGACAGCCCCTCAATTAAA--------------------- | 19 | - | - | - | 1 | |
| -------------TACTACCTCTCCATAGTTAGGGA---------------------------------------- | 23 | - | 1 | - | - | |
| ---TACTGCACTATACTACCTC------------------------------------------------------ | 19 | 1 | - | - | - | |
| rat | TTATACTGCACTATACTACCTCTCCATAGTTAGGGATGACAGCCCCTCAATTAAATGATCTCAGtgtcttttagca | |||||
| **************************************************************************** | ||||||
| rat | ......(((...(((((...((....(((((((((........)))).)))))...))....)))))......))) | 0.490 -9.10 | ||||
| rat | chromosome:5:114566354:114566429:-1 | intergenic |
sblock8246 [novel_lenNOK_cloningOK_multiarm_5varHIGH_loopOverlap_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.358 | no | no | 0.42/0.52 | 18/25/0.19 | 0.0 1.4 0.0 | 0.0 0.2 0.0 | 7 5 1 | 0 0 0 | 3 2 1 | 0 0 0 | 29 15 5 | -4 3 11 | 5arm_loop_3arm 3arm 3arm | 2 2 2 | nd nd nd | 0.58 0.50 0.40 | 6 5 4 | 16 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | ------------------------------UCGCAUU---------------------------------------------------- | 8 | novel | ||
| seed | ----------------------------------------------------GGACACA------------------------------ | 3 | novel | ||
| seed | -------------------------------CGCAUUC--------------------------------------------------- | 2 | novel | ||
| seed | -------------------------------------------------------CACAUGC--------------------------- | 1 | novel | ||
| seed | --------------------------------------------------------ACAUGCA-------------------------- | 1 | novel | ||
| seed | ------------------------------------------------------------GCAUGGA---------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T2S1 | T5S1 | |||
| -----------------------------TTCGCATTCTTAGAGCCAG----------------------------------------- | 19 | 1 | - | 7 | |
| ---------------------------------------------------TGGACACATGCATGGATGATTG---------------- | 22 | 1 | - | 2 | |
| ------------------------------TCGCATTCTTAGAGCCAG----------------------------------------- | 18 | - | 1 | 1 | |
| ------------------------------------------------------ACACATGCATGGATGATTG---------------- | 19 | - | - | 1 | |
| -------------------------------------------------------CACATGCATGGATGATTGC--------------- | 19 | - | - | 1 | |
| -----------------------------------------------------------TGCATGGATGATTGCCCGGGTAGAA----- | 25 | - | - | 1 | |
| rat | gtgaaacactcagggaggacaccttgcttTTCGCATTCTTAGAGCCAGctctggacacatgcatggatgattgcccgggtagaatcaca | ||||
| ***************************************************************************************** | |||||
| rat | ((((...((((.(((....((((.(((.........((.(((((....))))))).....))).)).))....)))))))....)))). | 0.720 -22.54 | |||
| rat | chromosome:3:141760444:141760532:1 | intergenic |
novel_loopOverlap_mirtron (29 loci)
block41908 [novel_loopOverlap_mirtron]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.019 | no | no | 0.57/0.57 | 23/23/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 34 | -4 | 3arm_loop | 1 | 2 | 0.26 | 3 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------------UGACUCC------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| ----------------------------------------------------------GTGACTCCTCCCCTTCCTCTTCT---------------------------------- | 23 | 1 | |
| rat | ctctggcctctcctctgttcaacctcactcctagaagaggcatgggacccaagggaagGTGACTCCTCCCCTTCCTCTTCTagaaccaggccgaagctcattacaagggccatag | ||
| ******************************************************************************************************************* | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000032737 ENSRNOG00000025370 RGD1563442_predicted | ||
| rat | ((.((((((.......((((..(((.....((((((((((...((((......((.((....))))))))...))))))))))....)))..)).)).........)))))).)) | 0.440 -37.19 |
| rat | chromosome:10:89575542:89575656:-1 | Same_strand|Intronic_coding|ENSRNOT00000032737|ENSRNOG00000025370 ## ENSRNOG00000025370|protein_coding|RGD1563442_predicted| |
block84667 [novel_loopOverlap_mirtron]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.030 | no | no | 0.48/0.48 | 21/21/1.00 | 0.0 | 0.0 | 2 | 0 | 1 | 0 | 27 | -2 | 3arm_loop | 1 | 0 | 0.24 | 3 | 2 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------------------ACUCUCU---------------------------------------- | 2 | novel |
| len | cloning frequencies | ||
| T1S1 | |||
| ----------------------------------------------------------------AACTCTCTCCCTTTCCTCTAG--------------------------- | 21 | 2 | |
| rat | gagcggcttcttttcatgtcagggctcttatctgaagaggaggggtctgagcccaaactgacagAACTCTCTCCCTTTCCTCTAGaactggtcaggcatgaagtgccagttc | ||
| **************************************************************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000007312 ENSRNOG00000005515 NP_001099289.1 | ||
| rat | (((((((....(((((((((..((((....(((..((((((((((...(((...............)))...))))).))))))))...)))).))))))))).))).)))) | 0.960 -38.36 |
| rat | chromosome:10:68571384:68571495:1 | Same_strand|Intronic_coding|ENSRNOT00000007312|ENSRNOG00000005515 ## ENSRNOG00000005515|protein_coding|NP_001099289.1|rhomboid, veinlet-like 4 [Source:RefSeq_peptide;Acc:NP_001099289] |
block138752 [novel_loopOverlap_mirtron]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.150 | no | no | 0.61/0.61 | 23/23/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 11 | -2 | 3arm_loop | 1 | 1 | 0.17 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ----------------------------------------UACCCCU-------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T4S1 | |||
| ---------------------------------------ATACCCCTCACCTCCCAACCCCA----------- | 23 | 1 | |
| rat | tccggtctggttggtcttgggccccgtggagccaggttgATACCCCTCACCTCCCAACCCCAggccttcggat | ||
| ************************************************************************* | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>> | ENSRNOT00000041777 ENSRNOG00000001738 Eif4g1 | ||
| rat | ((((((((((..(((..((((....((.(((...(((....))).)))))..))))))))))))))...))). | 0.630 -25.00 |
| rat | chromosome:11:82470731:82470803:-1 | Same_strand|Intronic_non-coding|ENSRNOT00000041777|ENSRNOG00000001738 ## Same_strand|Boundary_non-coding|ENSRNOT00000040029|ENSRNOG00000001738 ## ENSRNOG00000001738|protein_coding|Eif4g1| |
block562486 [novel_loopOverlap_mirtron]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.027 | no | no | 0.50/0.50 | 20/20/1.00 | 0.0 | 0.0 | 3 | 0 | 1 | 0 | 19 | -1 | 5arm_loop | 1 | 4 | 0.20 | 2 | 3 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | --------------------UGUCCAU------------------------------------------------------ | 3 | novel |
| len | cloning frequencies | ||
| T2S1 | |||
| -------------------TTGTCCATTTGTCTCCCTCC------------------------------------------ | 20 | 3 | |
| rat | cctcagtggctctcttctcTTGTCCATTTGTCTCCCTCCgcagggggatgcaggtgtcacaggccgcaagattattgtgga | ||
| ********************************************************************************* | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000015190 ENSRNOG00000011351 Mat1a | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000060678 ENSRNOG00000011351 Mat1a | ||
| rat | ((.((((((.(((.....(((((.(((((((.((((((....)))))).)))))))..))))).....))))))))).)). | 0.940 -29.00 |
| rat | chromosome:16:17560969:17561049:1 | Same_strand|Boundary_non-coding|ENSRNOT00000060677|ENSRNOG00000011351 ## Same_strand|Intronic_coding|ENSRNOT00000060678|ENSRNOG00000011351 ## ENSRNOG00000011351|protein_coding|Mat1a|methionine adenosyltransferase I, alpha Gene [Source:MGI Symbol;Acc:MGI:88017] |
block733490 [novel_loopOverlap_mirtron]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.024 | no | no | 0.40/0.40 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 39 | -1 | 3arm | 1 | 0 | 0.20 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | --------------------------------------------------------------CUGCUCU--------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T2S1 | |||
| -------------------------------------------------------------ACTGCTCTTTTCTCTTCTAG--------------------------------------- | 20 | 1 | |
| rat | taggtttaatttgggtaagaggatgattctgttggagcctcaagtgggaagactagcattaACTGCTCTTTTCTCTTCTAGgctactaatttagagccgtcaccatcaccagacgatctg | ||
| ************************************************************************************************************************ | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000018975 ENSRNOG00000014089 Map3k2 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000060996 ENSRNOG00000014089 Map3k2 | ||
| rat | ((((((...(((((.......((((..(((((((((((((.(((.(((((((.(((......))).))))))).)))..))))).)))))..)))..)))).......))))).)))))) | 1.000 -35.14 |
| rat | chromosome:18:24649990:24650109:1 | Same_strand|Intronic_coding|ENSRNOT00000060996|ENSRNOG00000014089 ## ENSRNOG00000014089|protein_coding|Map3k2|Mitogen activated serine/threonine protein kinase MEKK2 (Fragment). [Source:UniProtKB/TrEMBL;Acc:Q8R4A9] |
block736147 [novel_loopOverlap_mirtron]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.276 | no | no | 0.50/0.50 | 20/20/1.00 | 0.0 | 0.0 | 2 | 0 | 1 | 0 | 14 | -4 | 3arm_loop | 1 | 3 | 0.20 | 3 | 2 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------CCUUCUG-------------------------- | 2 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| ----------------------------------------------TCCTTCTGTGTCTTTCCCTG-------------- | 20 | 2 | |
| rat | agcccagcttagctcccaggcagagaaaaggagagcacgcctgattTCCTTCTGTGTCTTTCCCTGcaggatggctcgct | ||
| ******************************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>> | ENSRNOT00000060586 ENSRNOG00000002908 Slc35a4 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>> | ENSRNOT00000003878 ENSRNOG00000002908 Slc35a4 | ||
| rat | (((..((((....(((...((((......((((((.((((..((......)).)))))))))))))).))).)))).))) | 0.950 -23.80 |
| rat | chromosome:18:29319455:29319534:1 | Same_strand|Intronic_non-coding|ENSRNOT00000003878|ENSRNOG00000002908 ## Same_strand|Intronic_coding|ENSRNOT00000060586|ENSRNOG00000002908 ## ENSRNOG00000002908|protein_coding|Slc35a4|solute carrier family 35, member A4 [Source:RefSeq_peptide;Acc:NP_671481] |
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