other hairpins
novel_lenNOK_multiarm_DicerOK_nonpairedHIGH_bulgeHIGH (10 loci)
novel_lenNOK_multiarm_Multihit (10 loci)
sblock1422 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.397 | no | no | 0.32/0.43 | 19/21/0.25 | 0.0 0.0 0.0 0.0 | 0.0 0.0 0.0 0.0 | 1 1 1 1 | 0 0 0 0 | 1 1 1 1 | 0 0 0 0 | 0 22 13 8 | 29 12 19 26 | 5arm 3arm 3arm 3arm | 6 31 31 33 | nd nd nd nd | 0.16 0.37 0.19 0.32 | 1 3 2 3 | 4 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ----------------------------------------------------------------------GUUCUAU--------------------------------- | 1 | novel |
| seed | -UCAAAGU------------------------------------------------------------------------------------------------------ | 1 | novel |
| seed | ------------------------------------------------------------------------------------GUGAUAA------------------- | 1 | novel |
| seed | -----------------------------------------------------------------------------AGCUCUU-------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| TTCAAAGTCATTGCTGTTT------------------------------------------------------------------------------------------- | 19 | 1 | |
| ----------------------------------------------------------------------------TAGCTCTTGTGATAAATGCCG------------- | 21 | 1 | |
| ---------------------------------------------------------------------TGTTCTATAGCTCTTGTGA---------------------- | 19 | 1 | |
| -----------------------------------------------------------------------------------TGTGATAAATGCCGTGTGT-------- | 19 | 1 | |
| rat | TTCAAAGTCATTGCTGTTTatatttgaggctgaatgaaatgtgatgctacttttgaaagcataaaaattTGTTCTATAGCTCTTGTGATAAATGCCGTGTGTgcttggac | ||
| ************************************************************************************************************** | |||
| rat | .((.(((((((.((.((((((...((((((((((..((.....(((((.........))))).....))..)))...))).))))..)))))))).)))...)))).)). | 1.000 -21.50 |
| rat | chromosome:1:51119924:51120033:1 | intergenic |
sblock241 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.726 | no | no | 0.32/0.43 | 19/21/0.25 | 0.0 0.0 0.0 0.0 | 0.0 0.0 0.0 0.0 | 1 1 1 1 | 0 0 0 0 | 1 1 1 1 | 0 0 0 0 | 0 21 12 7 | 29 11 18 25 | 5arm 3arm 3arm 3arm | 6 31 31 33 | nd nd nd nd | 0.16 0.37 0.19 0.32 | 1 3 2 3 | 4 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------------------------------------------------------------GUUCUAU-------------------------------- | 1 | novel |
| seed | ----------------------------------------------------------------------------AGCUCUU------------------------- | 1 | novel |
| seed | -----------------------------------------------------------------------------------GUGAUAA------------------ | 1 | novel |
| seed | -UCAAAGU---------------------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| ----------------------------------------------------------------------------------TGTGATAAATGCCGTGTGT------- | 19 | 1 | |
| --------------------------------------------------------------------TGTTCTATAGCTCTTGTGA--------------------- | 19 | 1 | |
| TTCAAAGTCATTGCTGTTT----------------------------------------------------------------------------------------- | 19 | 1 | |
| ---------------------------------------------------------------------------TAGCTCTTGTGATAAATGCCG------------ | 21 | 1 | |
| rat | TTCAAAGTCATTGCTGTTTatatttgaggctgaatgaaatgtgatgctacttttgaaagcaaaaaattTGTTCTATAGCTCTTGTGATAAATGCCGTGTGTgcttgga | ||
| ************************************************************************************************************ | |||
| rat | .((.(((((((.((.((((((...((((((((((..((......((((.........)))).....))..)))...))).))))..)))))))).)))...)))).)) | 0.920 -18.20 |
| rat | chromosome:1:50004241:50004348:-1 | intergenic |
sblock343 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.474 | no | no | 0.32/0.43 | 19/21/0.25 | 0.0 0.0 0.0 0.0 | 0.0 0.0 0.0 0.0 | 1 1 1 1 | 0 0 0 0 | 1 1 1 1 | 0 0 0 0 | 0 22 13 8 | 29 12 19 26 | 5arm 3arm 3arm 3arm | 6 31 31 33 | nd nd nd nd | 0.16 0.37 0.19 0.32 | 1 3 2 3 | 4 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ----------------------------------------------------------------------GUUCUAU--------------------------------- | 1 | novel |
| seed | -UCAAAGU------------------------------------------------------------------------------------------------------ | 1 | novel |
| seed | ------------------------------------------------------------------------------------GUGAUAA------------------- | 1 | novel |
| seed | -----------------------------------------------------------------------------AGCUCUU-------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| TTCAAAGTCATTGCTGTTT------------------------------------------------------------------------------------------- | 19 | 1 | |
| ----------------------------------------------------------------------------TAGCTCTTGTGATAAATGCCG------------- | 21 | 1 | |
| ---------------------------------------------------------------------TGTTCTATAGCTCTTGTGA---------------------- | 19 | 1 | |
| -----------------------------------------------------------------------------------TGTGATAAATGCCGTGTGT-------- | 19 | 1 | |
| rat | TTCAAAGTCATTGCTGTTTatatttgaggctgaatgaaatgtgatgctacttttgaaagcataagaattTGTTCTATAGCTCTTGTGATAAATGCCGTGTGTgcttggac | ||
| ************************************************************************************************************** | |||
| rat | .((.(((((((.((.((((((...((((((((((..((.....(((((.........))))).....))..)))...))).))))..)))))))).)))...)))).)). | 0.980 -21.50 |
| rat | chromosome:1:50589218:50589327:-1 | intergenic |
sblock350 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.072 | no | no | 0.35/0.50 | 19/20/0.44 | 0.7 0.0 0.0 0.0 0.0 | 0.3 0.0 0.0 0.0 0.0 | 3 2 1 2 1 | 0 0 0 0 0 | 2 2 1 1 1 | 0 0 0 0 0 | 2 11 23 27 10 | 33 26 13 8 24 | 5arm 5arm 5arm 3arm 3arm | 33 33 33 45 45 | nd nd nd nd nd | 0.45 0.42 0.30 0.32 0.35 | 5 3 3 5 4 | 9 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | ------------CCAGUAA--------------------------------------------------------------------------------------------------- | 2 | novel | ||
| seed | ---GUGCUAG------------------------------------------------------------------------------------------------------------ | 2 | novel | ||
| seed | -------------------------------------------------------------------------GGUGUUU-------------------------------------- | 2 | novel | ||
| seed | -----------------------------------------------------------------------------------------GAUAAAC---------------------- | 1 | novel | ||
| seed | ------------------------GGAAGAU--------------------------------------------------------------------------------------- | 1 | novel | ||
| seed | -----GCUAGGA---------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T2S2 | T5S1 | |||
| ------------------------------------------------------------------------TGGTGTTTTTAGAGTGTGA--------------------------- | 19 | - | - | 2 | |
| -----------ACCAGTAACCTATGGAAGA---------------------------------------------------------------------------------------- | 19 | 1 | - | 1 | |
| --TGTGCTAGGACCAGTAACCT------------------------------------------------------------------------------------------------ | 20 | - | - | 2 | |
| ----TGCTAGGACCAGTAACCTA----------------------------------------------------------------------------------------------- | 19 | - | 1 | - | |
| -----------------------TGGAAGATTTCATGAGCTCA--------------------------------------------------------------------------- | 20 | 1 | - | - | |
| ----------------------------------------------------------------------------------------TGATAAACTTCAGGTGAATG---------- | 20 | - | - | 1 | |
| rat | tgTGTGCTAGGACCAGTAACCTATGGAAGATTTCATGAGCTCAtaccactctccacctcactttgtggaagcTGGTGTTTTTAGAGTGTGATAAACTTCAGGTGAATGgatgcattca | ||||
| ********************************************************************************************************************** | |||||
| rat | ((.((((.....(((...((((...((((...((((..((((((((((((.(((((........))))))).)))))).....))))))))....))))))))...)))..)))).)) | 1.000 -32.60 | |||
| rat | chromosome:1:50685806:50685923:-1 | intergenic |
sblock389 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.072 | no | no | 0.35/0.50 | 19/20/0.44 | 0.7 0.0 0.0 0.0 0.0 | 0.3 0.0 0.0 0.0 0.0 | 3 2 1 2 1 | 0 0 0 0 0 | 2 2 1 1 1 | 0 0 0 0 0 | 2 11 23 27 10 | 33 26 13 8 24 | 5arm 5arm 5arm 3arm 3arm | 33 33 33 45 45 | nd nd nd nd nd | 0.45 0.42 0.30 0.32 0.35 | 5 3 3 5 4 | 9 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | ------------CCAGUAA--------------------------------------------------------------------------------------------------- | 2 | novel | ||
| seed | ---GUGCUAG------------------------------------------------------------------------------------------------------------ | 2 | novel | ||
| seed | -------------------------------------------------------------------------GGUGUUU-------------------------------------- | 2 | novel | ||
| seed | -----------------------------------------------------------------------------------------GAUAAAC---------------------- | 1 | novel | ||
| seed | ------------------------GGAAGAU--------------------------------------------------------------------------------------- | 1 | novel | ||
| seed | -----GCUAGGA---------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T2S2 | T5S1 | |||
| ------------------------------------------------------------------------TGGTGTTTTTAGAGTGTGA--------------------------- | 19 | - | - | 2 | |
| -----------ACCAGTAACCTATGGAAGA---------------------------------------------------------------------------------------- | 19 | 1 | - | 1 | |
| --TGTGCTAGGACCAGTAACCT------------------------------------------------------------------------------------------------ | 20 | - | - | 2 | |
| ----TGCTAGGACCAGTAACCTA----------------------------------------------------------------------------------------------- | 19 | - | 1 | - | |
| -----------------------TGGAAGATTTCATGAGCTCA--------------------------------------------------------------------------- | 20 | 1 | - | - | |
| ----------------------------------------------------------------------------------------TGATAAACTTCAGGTGAATG---------- | 20 | - | - | 1 | |
| rat | tgTGTGCTAGGACCAGTAACCTATGGAAGATTTCATGAGCTCAtaccactctccacctcactttgtggaagcTGGTGTTTTTAGAGTGTGATAAACTTCAGGTGAATGgatgcattca | ||||
| ********************************************************************************************************************** | |||||
| rat | ((.((((.....(((...((((...((((...((((..((((((((((((.(((((........))))))).)))))).....))))))))....))))))))...)))..)))).)) | 1.000 -32.60 | |||
| rat | chromosome:1:50839937:50840054:-1 | intergenic |
sblock397 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.474 | no | no | 0.32/0.43 | 19/21/0.25 | 0.0 0.0 0.0 0.0 | 0.0 0.0 0.0 0.0 | 1 1 1 1 | 0 0 0 0 | 1 1 1 1 | 0 0 0 0 | 0 22 13 8 | 29 12 19 26 | 5arm 3arm 3arm 3arm | 6 31 31 33 | nd nd nd nd | 0.16 0.37 0.19 0.32 | 1 3 2 3 | 4 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ----------------------------------------------------------------------GUUCUAU--------------------------------- | 1 | novel |
| seed | -UCAAAGU------------------------------------------------------------------------------------------------------ | 1 | novel |
| seed | ------------------------------------------------------------------------------------GUGAUAA------------------- | 1 | novel |
| seed | -----------------------------------------------------------------------------AGCUCUU-------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| TTCAAAGTCATTGCTGTTT------------------------------------------------------------------------------------------- | 19 | 1 | |
| ----------------------------------------------------------------------------TAGCTCTTGTGATAAATGCCG------------- | 21 | 1 | |
| ---------------------------------------------------------------------TGTTCTATAGCTCTTGTGA---------------------- | 19 | 1 | |
| -----------------------------------------------------------------------------------TGTGATAAATGCCGTGTGT-------- | 19 | 1 | |
| rat | TTCAAAGTCATTGCTGTTTatatttgaggctgaatgaaatgtgatgctacttttgaaagcataagaattTGTTCTATAGCTCTTGTGATAAATGCCGTGTGTgcttggac | ||
| ************************************************************************************************************** | |||
| rat | .((.(((((((.((.((((((...((((((((((..((.....(((((.........))))).....))..)))...))).))))..)))))))).)))...)))).)). | 0.980 -21.50 |
| rat | chromosome:1:50855931:50856040:-1 | intergenic |
sblock401 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.072 | no | no | 0.35/0.50 | 19/20/0.44 | 0.7 0.0 0.0 0.0 0.0 | 0.3 0.0 0.0 0.0 0.0 | 3 2 1 2 1 | 0 0 0 0 0 | 2 2 1 1 1 | 0 0 0 0 0 | 2 11 23 27 10 | 33 26 13 8 24 | 5arm 5arm 5arm 3arm 3arm | 33 33 33 45 45 | nd nd nd nd nd | 0.45 0.42 0.30 0.32 0.35 | 5 3 3 5 4 | 9 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | ------------CCAGUAA--------------------------------------------------------------------------------------------------- | 2 | novel | ||
| seed | ---GUGCUAG------------------------------------------------------------------------------------------------------------ | 2 | novel | ||
| seed | -------------------------------------------------------------------------GGUGUUU-------------------------------------- | 2 | novel | ||
| seed | -----------------------------------------------------------------------------------------GAUAAAC---------------------- | 1 | novel | ||
| seed | ------------------------GGAAGAU--------------------------------------------------------------------------------------- | 1 | novel | ||
| seed | -----GCUAGGA---------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T2S2 | T5S1 | |||
| ------------------------------------------------------------------------TGGTGTTTTTAGAGTGTGA--------------------------- | 19 | - | - | 2 | |
| -----------ACCAGTAACCTATGGAAGA---------------------------------------------------------------------------------------- | 19 | 1 | - | 1 | |
| --TGTGCTAGGACCAGTAACCT------------------------------------------------------------------------------------------------ | 20 | - | - | 2 | |
| ----TGCTAGGACCAGTAACCTA----------------------------------------------------------------------------------------------- | 19 | - | 1 | - | |
| -----------------------TGGAAGATTTCATGAGCTCA--------------------------------------------------------------------------- | 20 | 1 | - | - | |
| ----------------------------------------------------------------------------------------TGATAAACTTCAGGTGAATG---------- | 20 | - | - | 1 | |
| rat | tgTGTGCTAGGACCAGTAACCTATGGAAGATTTCATGAGCTCAtaccactctccacctcactttgtggaagcTGGTGTTTTTAGAGTGTGATAAACTTCAGGTGAATGgatgcattca | ||||
| ********************************************************************************************************************** | |||||
| rat | ((.((((.....(((...((((...((((...((((..((((((((((((.(((((........))))))).)))))).....))))))))....))))))))...)))..)))).)) | 1.000 -32.60 | |||
| rat | chromosome:1:50918384:50918501:-1 | intergenic |
sblock475 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.143 | no | no | 0.35/0.50 | 19/20/0.38 | 0.7 0.0 0.0 0.0 | 0.3 0.0 0.0 0.0 | 3 2 2 1 | 0 0 0 0 | 2 2 1 1 | 0 0 0 0 | 1 10 30 13 | 33 26 8 24 | 5arm 5arm 3arm 3arm | 33 33 45 45 | nd nd nd nd | 0.32 0.42 0.42 0.20 | 3 3 5 3 | 8 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | ------------------------------------------------------------------------GGUGUUU----------------------------------------- | 2 | novel | ||
| seed | --GUGCUAG--------------------------------------------------------------------------------------------------------------- | 2 | novel | ||
| seed | -----------CCAGUAA------------------------------------------------------------------------------------------------------ | 2 | novel | ||
| seed | ----------------------------------------------------------------------------------------GAUAAAC------------------------- | 1 | novel | ||
| seed | ----GCUAGGA------------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T2S2 | T5S1 | |||
| -TGTGCTAGGACCAGTAACCT--------------------------------------------------------------------------------------------------- | 20 | - | - | 2 | |
| -----------------------------------------------------------------------TGGTGTTTTTAGAGTGTGA------------------------------ | 19 | - | - | 2 | |
| ----------ACCAGTAACCTATGGAAGA------------------------------------------------------------------------------------------- | 19 | 1 | - | 1 | |
| ---TGCTAGGACCAGTAACCTA-------------------------------------------------------------------------------------------------- | 19 | - | 1 | - | |
| ---------------------------------------------------------------------------------------TGATAAACTTCAGGTGAATG------------- | 20 | - | - | 1 | |
| rat | gTGTGCTAGGACCAGTAACCTATGGAAGActttatgagctcataccactctccacctcactttgtggaagcTGGTGTTTTTAGAGTGTGATAAACTTCAGGTGAATGgattcagtcagct | ||||
| ************************************************************************************************************************ | |||||
| ---------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000041486 ENSRNOG00000033456 LOC308198 | ||||
| ---------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000051441 ENSRNOG00000033456 LOC308198 | ||||
| ---------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000059913 ENSRNOG00000033456 LOC308198 | ||||
| ---------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000044415 ENSRNOG00000033456 LOC308198 | ||||
| ---------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000059911 ENSRNOG00000039169 | ||||
| rat | ((..(((.((((((...((((...((((..(((((..((((((((((((.(((((........))))))).)))))).....))))...)))))))))))))...))).))))))..)). | 0.990 -32.50 | |||
| rat | chromosome:1:52480862:52480981:-1 | Opposite_strand|Intronic_non-coding|ENSRNOT00000059913|ENSRNOG00000033456 ## Opposite_strand|Intronic_coding|ENSRNOT00000059911|ENSRNOG00000039169 ## ENSRNOG00000039169|protein_coding|| ## ENSRNOG00000033456|protein_coding|LOC308198| |
sblock5493 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.320 | no | no | 0.45/0.63 | 18/20/0.25 | 0.0 0.5 0.0 | 0.0 0.5 0.0 | 1 2 1 | 0 0 0 | 1 2 1 | 0 0 0 | 10 27 6 | 26 3 26 | 5arm 3arm 3arm | 24 24 24 | nd nd nd | 0.35 0.32 0.22 | 3 2 2 | 4 | 4 | na | na |
| reads | miRBase family seed | |||||
| seed | ----------------------------------------------------------------------------------------CCUGUAG---------------- | 1 | miR-10b | |||
| seed | ------------------------------------------------------------------CCUGUUC-------------------------------------- | 1 | novel | |||
| seed | -----------------------------------------------------------------ACCUGUU--------------------------------------- | 1 | novel | |||
| seed | -----------GAAUUGA--------------------------------------------------------------------------------------------- | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S2 | T2S2 | T3S2 | T4S1 | |||
| ---------------------------------------------------------------------------------------CCCTGTAGAGAAGGCCCT------ | 18 | - | 1 | - | - | |
| -----------------------------------------------------------------ACCTGTTCCGTGGCACACT--------------------------- | 19 | - | - | 1 | - | |
| ----------------------------------------------------------------GACCTGTTCCGTGGCACAC---------------------------- | 19 | 1 | - | - | - | |
| ----------GGAATTGACTTCTACACCTC--------------------------------------------------------------------------------- | 20 | - | - | - | 1 | |
| rat | tctctatgagGGAATTGACTTCTACACCTCcattacccgtgctggatttgaggagttgaatgctGACCTGTTCCGTGGCACACTggaCCCTGTAGAGAAGGCCCTttgaga | |||||
| *************************************************************************************************************** | ||||||
| rat | ((((...(((((..((...(((((((..((((......((((((((....((((((.....)))..)))..)))..)))))..))))...)))))))))..))))).)))) | 0.720 -31.80 | ||||
| rat | chromosome:18:49533828:49533938:-1 | intergenic |
sblock7517 [novel_lenNOK_multiarm_Multihit]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.575 | no | no | 0.40/0.53 | 19/20/0.33 | 0.0 0.0 0.0 | 0.0 0.0 0.0 | 1 1 1 | 0 0 0 | 1 1 1 | 0 0 0 | 22 26 6 | 12 7 29 | 5arm 5arm 3arm | 19 21 24 | nd nd nd | 0.37 0.25 0.42 | 4 2 5 | 3 | 2 | na | na |
| reads | miRBase family seed | |||
| seed | ---------------------------------------------------------------------------------------UCUGACA----------------- | 1 | novel | |
| seed | ---------------------------AACACAG----------------------------------------------------------------------------- | 1 | novel | |
| seed | -----------------------CACCAAC--------------------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T2S1 | T5S1 | |||
| ----------------------CCACCAACACAGTTTTTGA---------------------------------------------------------------------- | 19 | 1 | - | |
| --------------------------------------------------------------------------------------GTCTGACATGAAGCACTGG------ | 19 | 1 | - | |
| --------------------------CAACACAGTTTTTGATGCCA----------------------------------------------------------------- | 20 | - | 1 | |
| rat | aagaatcaggttgccatgaaccCCACCAACACAGTTTTTGATGCCAaacgtctgatcggatgtaggttcgatgatgctgttgttcaGTCTGACATGAAGCACTGGcccttc | |||
| *************************************************************************************************************** | ||||
| ------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000033967 ENSRNOG00000023797 | |||
| rat | (((..(((((((..((((.........((((((((..((((.(((..((((((....)))))).)))))))....))))).)))........)))).))).))))..))). | 0.520 -25.83 | ||
| rat | chromosome:3:60814546:60814656:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000033967|ENSRNOG00000023797 ## ENSRNOG00000023797|protein_coding|| |
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