other hairpins
novel_lenNOK_multiarm_5varHIGH (9 loci)
sblock11460 [novel_lenNOK_multiarm_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.342 | no | no | 0.29/0.47 | 19/22/0.29 | 3.0 0.2 0.0 | 1.5 0.2 0.0 | 2 4 1 | 0 0 0 | 1 2 1 | 0 0 0 | 2 31 3 | 30 6 26 | 5arm 5arm 3arm | 1 1 1 | nd nd nd | 0.21 0.47 0.19 | 3 5 2 | 7 | 2 | na | na |
| reads | miRBase family seed | |||
| seed | ---------------------------------AGGAUUU---------------------------------------------------------------------- | 3 | novel | |
| seed | ---------------------------------------------------------------------------------------GCUAAUC---------------- | 1 | novel | |
| seed | ---UUAGAUU---------------------------------------------------------------------------------------------------- | 1 | novel | |
| seed | --------------------------------UAGGAUU----------------------------------------------------------------------- | 1 | novel | |
| seed | ---------UAGAAGA---------------------------------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T3S2 | T5S1 | |||
| --------------------------------TAGGATTTCAGTCACCAGT----------------------------------------------------------- | 19 | - | 3 | |
| --------TTAGAAGACCAGTTGGCTG----------------------------------------------------------------------------------- | 19 | - | 1 | |
| -------------------------------TTAGGATTTCAGTCACCAG------------------------------------------------------------ | 19 | 1 | - | |
| --ATTAGATTAGAAGACCAGTTGG-------------------------------------------------------------------------------------- | 22 | - | 1 | |
| --------------------------------------------------------------------------------------AGCTAATCTTTTGTGAAATGA--- | 21 | - | 1 | |
| rat | gaATTAGATTAGAAGACCAGTTGGCTGgacaTTAGGATTTCAGTCACCAGTtaatactatgtgtaaaaggaaaaagagactcttttAGCTAATCTTTTGTGAAATGAttc | |||
| ************************************************************************************************************** | ||||
| rat | ((((((..(((.((((...((((((((((....((..((((.....((..((.((((...))))))..)).....))))..)))))))))))).)))).)))..)))))) | 0.510 -20.30 | ||
| rat | chromosome:7:121568978:121569087:1 | intergenic |
sblock11549 [novel_lenNOK_multiarm_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.784 | no | no | 0.73/0.78 | 18/22/0.50 | 0.0 2.0 | 0.0 1.0 | 1 3 | 0 0 | 1 2 | 0 0 | 0 21 | 40 3 | 5arm 3arm | 1 1 | nd nd | 0.72 0.27 | 8 2 | 4 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | -----------------------------------------------------------------------UGCAGGC----------------------------------- | 2 | novel | ||
| seed | -GCCAGUC--------------------------------------------------------------------------------------------------------- | 1 | novel | ||
| seed | --------------------------------------------------------------------UCCUGCA-------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T5S1 | T5S2 | |||
| -------------------------------------------------------------------GTCCTGCAGGCGCGGAGCAAGC------------------------ | 22 | - | - | 1 | |
| ----------------------------------------------------------------------CTGCAGGCGCGGAGCAAGC------------------------ | 19 | 1 | - | - | |
| ----------------------------------------------------------------------CTGCAGGCGCGGAGCAAGCACC--------------------- | 22 | - | - | 1 | |
| CGCCAGTCCGCGGATCCC----------------------------------------------------------------------------------------------- | 18 | - | 1 | - | |
| rat | CGCCAGTCCGCGGATCCCggccgcggtccgggcgcgcgcagctagcgggcgcgactatgccaagatgGTCCTGCAGGCGCGGAGCAAGCACCgggacgcggctcccaggccgc | ||||
| ***************************************************************************************************************** | |||||
| rat | .........((((.....(((((((..((((((((.(((.(((.(((((....(((((......)))))))))).))))))..))..)).))))..)))))))......)))) | 0.750 -53.50 | |||
| rat | chromosome:8:24160452:24160564:-1 | intergenic ## {SimpF: 1 Eponine, -1 Eponine} |
sblock2842 [novel_lenNOK_multiarm_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.068 | no | no | 0.50/0.56 | 18/26/0.62 | 0.0 3.0 0.0 | 0.0 0.5 0.0 | 1 6 1 | 0 0 0 | 1 3 1 | 0 0 0 | 15 28 28 | 18 0 -4 | 5arm 5arm 3arm_loop | 1 1 1 | nd nd nd | 0.29 0.46 0.40 | 2 9 4 | 8 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | ----------------------------------GAUGCGA------------------------------------------------------------- | 3 | novel | ||
| seed | -----------------------------GCUCUGA------------------------------------------------------------------ | 2 | novel | ||
| seed | --------------------------------CUGAUGC--------------------------------------------------------------- | 1 | novel | ||
| seed | -------------------------------------------------------AAGUGAC---------------------------------------- | 1 | novel | ||
| seed | ----------------GUCAGGU------------------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T4S1 | T5S1 | |||
| ---------------------------------TGATGCGACTCTCCTCTGTCA------------------------------------------------ | 21 | - | 1 | 1 | |
| ----------------------------TGCTCTGATGCGACTCTCCTCTGTCA------------------------------------------------ | 26 | - | - | 2 | |
| ------------------------------------------------------TAAGTGACAGTCCAGCTCTG---------------------------- | 20 | - | - | 1 | |
| ---------------------------------TGATGCGACTCTCCTCTG--------------------------------------------------- | 18 | 1 | - | - | |
| -------------------------------TCTGATGCGACTCTCCTCTGTCA------------------------------------------------ | 23 | - | - | 1 | |
| ---------------TGTCAGGTGTGCTTGCTCTGA------------------------------------------------------------------ | 21 | - | - | 1 | |
| rat | tgctgtccgagcaggTGTCAGGTGTGCTTGCTCTGATGCGACTCTCCTCTGTCATAAGTGACAGTCCAGCTCTGagcgacatctttctgtggcttgcacagt | ||||
| ****************************************************************************************************** | |||||
| rat | .(((((....((((((..((((.(((.((((((.((.((.........((((((....))))))....)))).)))))))))...))))..))))))))))) | 0.790 -34.62 | |||
| rat | chromosome:10:92629114:92629215:1 | intergenic |
sblock4107 [novel_lenNOK_multiarm_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.951 | no | no | 0.36/0.45 | 19/25/0.40 | 0.0 2.3 | 0.0 3.3 | 2 3 | 0 0 | 1 2 | 0 0 | 4 24 | 37 0 | 5arm 3arm | 1 9 | nd nd | 0.32 0.23 | 3 2 | 5 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | -----AUUGACA---------------------------------------------------------------------------------------------------------- | 2 | novel | ||
| seed | -------------------------------------------------------------------------CAGAGAC-------------------------------------- | 1 | novel | ||
| seed | -------------------------------------------------------------------AGGACAC-------------------------------------------- | 1 | novel | ||
| seed | --------------------------------------------------------------------GGACACA------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S2 | T2S2 | T3S1 | |||
| ----TATTGACATCTCCCTGTGA----------------------------------------------------------------------------------------------- | 19 | - | - | 2 | |
| ------------------------------------------------------------------------ACAGAGACTTCATCAAGAACAT------------------------ | 22 | 1 | - | - | |
| ------------------------------------------------------------------CAGGACACAGAGACTTCATCAA------------------------------ | 22 | 1 | - | - | |
| -------------------------------------------------------------------AGGACACAGAGACTTCATCAAGAAC-------------------------- | 25 | - | 1 | - | |
| rat | tcacTATTGACATCTCCCTGTGAaaatttgagaacaggaagtactatgcgactatcattgatacccCAGGACACAGAGACTTCATCAAGAACATgattacaggcacatctcaggctga | ||||
| ********************************************************************************************************************** | |||||
| rat | (((...((((.((...(((((((..((((((......(((((.((.((......((.(((......)))))..)).))))))).))))....))..)))))))...)).))))..))) | 0.510 -15.40 | |||
| rat | chromosome:14:67223964:67224081:-1 | intergenic |
sblock7166 [novel_lenNOK_multiarm_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.185 | no | no | 0.23/0.47 | 18/24/0.31 | 2.5 0.0 0.0 0.0 0.0 | 1.2 0.0 0.0 0.0 0.0 | 4 1 1 1 7 | 0 0 0 0 0 | 1 1 1 1 1 | 0 0 0 0 0 | 6 22 19 10 2 | 9 -5 9 22 29 | 5arm 5arm_loop_3arm 3arm 3arm 3arm | 2 2 2 2 2 | nd nd nd nd nd | 0.27 0.46 0.32 0.56 0.68 | 2 5 2 10 10 | 16 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | --------------------------------------------------------------------------GAGCAAA------------- | 7 | novel |
| seed | --------------UUGAGGA------------------------------------------------------------------------- | 2 | novel |
| seed | -------GAAUGAU-------------------------------------------------------------------------------- | 1 | novel |
| seed | ----------------------------------------------------------------------------GCAAAAG----------- | 1 | novel |
| seed | -------------------------------------------------------------------AAUCAUU-------------------- | 1 | novel |
| seed | -----------GAUUUGA---------------------------------------------------------------------------- | 1 | novel |
| seed | -------------------------------------------------------------------------UGAGCAA-------------- | 1 | novel |
| seed | -----------------------GUUUGUA---------------------------------------------------------------- | 1 | novel |
| seed | ------------------------------------------------------UCAAGUG--------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| -------------------------------------------------------------------------TGAGCAAAAGACGTCAGAC-- | 19 | 7 | |
| -------------TTTGAGGAATGTTTGTAGA-------------------------------------------------------------- | 19 | 2 | |
| ------------------------------------------------------------------TAATCATTGAGCAAAAGA---------- | 18 | 1 | |
| -----------------------------------------------------TTCAAGTGTTATTTAATCATTG------------------- | 22 | 1 | |
| ---------------------------------------------------------------------------AGCAAAAGACGTCAGACGT | 19 | 1 | |
| ----------------------TGTTTGTAGAATGGACACCCAAGG------------------------------------------------ | 24 | 1 | |
| ------------------------------------------------------------------------TTGAGCAAAAGACGTCAGAC-- | 20 | 1 | |
| ----------TGATTTGAGGAATGTTTGTAG--------------------------------------------------------------- | 21 | 1 | |
| ------TGAATGATTTGAGGAATGTTTG------------------------------------------------------------------ | 22 | 1 | |
| rat | agtggatgaatgatttgaggaatgtttgtagaatggacacccaaggtggacagttcaagtgttatttaatcatTGAGCAAAAGACGTCAGACgt | ||
| ********************************************************************************************** | |||
| rat | .((.(((((((((((.((..((..((((.....((..((((...))))..))...))))..)).)).)))))))..........))))..)).. | 0.550 -19.50 |
| rat | chromosome:20:5548211:5548304:1 | intergenic |
sblock858 [novel_lenNOK_multiarm_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.694 | no | no | 0.39/0.58 | 18/23/0.27 | 0.0 0.0 1.6 | 0.0 0.0 1.0 | 1 5 5 | 0 0 0 | 1 1 1 | 0 0 0 | 0 19 2 | 41 14 27 | 5arm 3arm 3arm | 1 1 1 | nd nd nd | 0.50 0.26 0.30 | 4 3 3 | 11 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ----------------------------------------------------------------------------------GCCCAGU------------------------------ | 5 | novel |
| seed | -----------------------------------------------------------------------------------------------AGUGUAA----------------- | 3 | novel |
| seed | ---------------------------------------------------------------------------------------------------UAAGUCA------------- | 2 | novel |
| seed | -GGUAGGU--------------------------------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| ---------------------------------------------------------------------------------GGCCCAGTGACCATAGTGT------------------- | 19 | 5 | |
| --------------------------------------------------------------------------------------------------GTAAGTCAGAGTACGGAAG-- | 19 | 2 | |
| ----------------------------------------------------------------------------------------------TAGTGTAAGTCAGAGTACGGAAG-- | 23 | 2 | |
| ----------------------------------------------------------------------------------------------TAGTGTAAGTCAGAGTAC------- | 18 | 1 | |
| TGGTAGGTTTCATAGACTCA--------------------------------------------------------------------------------------------------- | 20 | 1 | |
| rat | tggtaggtttcatagactcatatatttgtggctgtgaccagctggtgcagatctgaagaggttgaagtcttgtatggtgtaGGCCCAGTGACCATAGTGTAAGTCAGAGTACGGAAGct | ||
| *********************************************************************************************************************** | |||
| rat | .....((((((....((((....((((...((((((....(((((.((..(((....((((......))))....)))....)))))))...))))))..))))..))))...)))))) | 0.470 -28.00 |
| rat | chromosome:1:184352683:184352801:-1 | intergenic |
novel_lenNOK_multiarm_DicerNOK_5varHIGH_randfoldOK (9 loci)
sblock10395 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.002 | no | no | 0.45/0.50 | 19/24/0.50 | 0.0 1.7 | 0.0 0.0 | 1 3 | 0 0 | 1 2 | 0 0 | 13 0 | 1 9 | 5arm 3arm | 1 1 | nd nd | 0.23 0.26 | 3 2 | 4 | 2 | 12 | 12 |
| reads | miRBase family seed | |||
| seed | -----------------------------------------------------------------GAGAGGU----------- | 2 | novel | |
| seed | --------------CUCUUAG-------------------------------------------------------------- | 1 | novel | |
| seed | ------------------------------------------------------------AGCGUGA---------------- | 1 | novel | |
| len | cloning frequencies | |||
| T3S1 | T5S1 | |||
| ----------------------------------------------------------------TGAGAGGTCAGCATCAGAA | 19 | 2 | - | |
| -----------------------------------------------------------AAGCGTGAGAGGTCAGCATCAGAA | 24 | - | 1 | |
| -------------TCTCTTAGCACGTGACTGATTG------------------------------------------------ | 22 | - | 1 | |
| rat | ttctccttgtccaTCTCTTAGCACGTGACTGATTGccaaaaacaccaagagcaatcagcAAGCGTGAGAGGTCAGCATCAGAA | |||
| *********************************************************************************** | ||||
| --------------------------------------------------------------------------------------------- | ENSRNOT00000005175 ENSRNOG00000003813 Kcnk10 | |||
| rat | .(((...(((..((((((...(((((..((((((((..............))))))))...)))))))))))..)))..))). | 1.000 -25.64 | ||
| rat | chromosome:6:122616274:122616356:1 | Opposite_strand|Intronic_coding|ENSRNOT00000005175|ENSRNOG00000003813 ## ENSRNOG00000003813|protein_coding|Kcnk10|Potassium channel subfamily K member 10 (Outward rectifying potassium channel protein TREK-2) (TREK-2 K(+) channel subunit). [Source:UniProtKB/Swiss-Prot;Acc:Q9JIS4] |
sblock175 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.003 | no | no | 0.37/0.60 | 18/23/0.25 | 0.0 0.0 5.6 | 0.0 0.0 2.0 | 1 2 5 | 0 0 0 | 1 2 3 | 0 0 0 | 4 39 13 | 36 2 12 | 5arm 5arm 3arm | 1 1 2 | nd nd nd | 0.40 0.42 0.16 | 4 3 1 | 8 | 4 | 14 | 18 |
| reads | miRBase family seed | |||||
| seed | --------------------------------------------------------------------------------------GAGACCA------------------------ | 4 | novel | |||
| seed | ----------------------------------------GACAAGA---------------------------------------------------------------------- | 2 | novel | |||
| seed | -------------------------------------------------------------------------------GGAUGUU------------------------------- | 1 | novel | |||
| seed | -----AACAGCA--------------------------------------------------------------------------------------------------------- | 1 | miR-21* | |||
| len | cloning frequencies | |||||
| T1S1 | T1S2 | T4S1 | T5S1 | |||
| -------------------------------------------------------------------------------------TGAGACCAGTGTGACTAGG------------- | 19 | - | 1 | 1 | - | |
| ---------------------------------------TGACAAGATAATGGCCAAA----------------------------------------------------------- | 19 | 1 | - | - | 1 | |
| -------------------------------------------------------------------------------------TGAGACCAGTGTGACTAG-------------- | 18 | - | 1 | - | 1 | |
| ------------------------------------------------------------------------------TGGATGTTGAGACCAGTGTGACT---------------- | 23 | - | - | - | 1 | |
| ----GAACAGCAGCCCTAGTGGCT--------------------------------------------------------------------------------------------- | 20 | - | - | - | 1 | |
| rat | agaaGAACAGCAGCCCTAGTGGCTattctgccttctcttTGACAAGATAATGGCCAAAgggagacactaggccattggTGGATGTTGAGACCAGTGTGACTAGGgcggggtagcttc | |||||
| ********************************************************************************************************************* | ||||||
| ------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000045258 ENSRNOG00000033713 | |||||
| ------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000043557 ENSRNOG00000033713 | |||||
| ------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000051032 ENSRNOG00000033713 | |||||
| rat | .((((....((.((((((((.((....(((...((((.....((...((((((((...((......)).)))))))).))......)))).))).)).))))))))...))..)))) | 0.920 -41.10 | ||||
| rat | chromosome:1:49025102:49025218:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000051032|ENSRNOG00000033713 ## ENSRNOG00000033713|protein_coding|| |
sblock2352 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.63/0.73 | 18/22/0.33 | 0.0 1.5 | 0.0 0.5 | 1 2 | 0 0 | 1 2 | 0 0 | 20 0 | 4 24 | 5arm 3arm | 1 2 | nd nd | 0.11 0.39 | 1 6 | 3 | 3 | 0 | -16 |
| reads | miRBase family seed | ||||
| seed | --------------------------------------------------------------------------CGUGGCU-------------- | 1 | novel | ||
| seed | ---------------------GGGCCUC------------------------------------------------------------------- | 1 | novel | ||
| seed | -----------------------------------------------------------------------------GGCUCUC----------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S2 | T2S1 | T3S1 | |||
| ----------------------------------------------------------------------------TGGCTCTCCAGGACACCC- | 18 | 1 | - | - | |
| --------------------TGGGCCTCAGCCAAGGACT-------------------------------------------------------- | 19 | - | 1 | - | |
| -------------------------------------------------------------------------CCGTGGCTCTCCAGGACACCCC | 22 | - | - | 1 | |
| rat | ttctgtaaacagagccggttTGGGCCTCAGCCAAGGACTgggtgtcctggcccagcctgggtgtgaggcccatCCGTGGCTCTCCAGGACACCCC | ||||
| *********************************************************************************************** | |||||
| rat | (((((.....((((((((..((((((((((((.(((.((((((......))))))))).))).))))))))).))..)))))).)))))...... | 0.970 -50.80 | |||
| rat | chromosome:10:37440759:37440853:-1 | intergenic |
sblock2411 [novel_lenNOK_multiarm_DicerNOK_5varHIGH_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.42/0.50 | 18/24/0.62 | 1.4 0.0 | 2.1 0.0 | 7 1 | 0 0 | 2 1 | 0 0 | 15 19 | 0 2 | 5arm 3arm | 1 1 | nd nd | 0.17 0.30 | 3 4 | 8 | 2 | 2 | 0 |
| reads | miRBase family seed | |||
| seed | -----------------CCCAGAG------------------------------------------------------------------- | 3 | novel | |
| seed | ------------------CCAGAGC------------------------------------------------------------------ | 2 | novel | |
| seed | --------------------------------------------------CCAUAGU---------------------------------- | 1 | novel | |
| seed | -------------------CAGAGCU----------------------------------------------------------------- | 1 | novel | |
| seed | ----------------CCCCAGA-------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T1S1 | T1S2 | |||
| -------------------------------------------------TCCATAGTTTGCTAGCTCTGTCT------------------- | 23 | 1 | - | |
| -----------------CCCAGAGCTTAACAAACTTGG----------------------------------------------------- | 21 | 1 | - | |
| -----------------CCCAGAGCTTAACAAACTT------------------------------------------------------- | 19 | - | 1 | |
| ----------------CCCCAGAGCTTAACAAACT-------------------------------------------------------- | 19 | - | 1 | |
| ----------------CCCCAGAGCTTAACAAACTTGGA---------------------------------------------------- | 23 | - | 1 | |
| ----------------CCCCAGAGCTTAACAAAC--------------------------------------------------------- | 18 | - | 1 | |
| ------------------CCAGAGCTTAACAAACTTGGAGA-------------------------------------------------- | 23 | 1 | - | |
| ---------------TCCCCAGAGCTTAACAAACTTGGA---------------------------------------------------- | 24 | - | 1 | |
| rat | caatgatacctccttTCCCCAGAGCTTAACAAACTTGGAGAaactcgttTCCATAGTTTGCTAGCTCTGTCTtgaattttttttttattga | |||
| ******************************************************************************************* | ||||
| ----------------------------------------------------------------------------------------------------- | ENSRNOT00000036278 ENSRNOG00000024535 Zzef1 | |||
| rat | ((((((........(((..(((((((...((((((((((((......)))))).))))))..)))))))....)))........)))))). | 0.990 -26.59 | ||
| rat | chromosome:10:59791063:59791153:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000036278|ENSRNOG00000024535 ## ENSRNOG00000024535|protein_coding|Zzef1|zinc finger, ZZ-type with EF hand domain 1 Gene [Source:MGI (curated);Acc:Zzef1-001] |
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