other hairpins
novel_lenNOK_shortStem_5varHIGH_loopOverlap_randfoldOK_nonpairedHIGH_bulgeHIGH (3 loci)
novel_lenNOK_shortStem_mirtron_randfoldOK_nonpairedHIGH_bulgeHIGH (3 loci)
block1091851 [novel_lenNOK_shortStem_mirtron_randfoldOK_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.53/0.53 | 19/19/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 3 | 14 | 3arm | 2 | 4 | 0.32 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -------------------------------------------------------------------ACCCUCU-------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S2 | |||
| ------------------------------------------------------------------TACCCTCTCCTTCTCTCCT--- | 19 | 1 | |
| rat | ggaggattatttgggtgagtggctcacttgggatccagcaccctcactcctcagggcctggaccctTACCCTCTCCTTCTCTCCTtca | ||
| **************************************************************************************** | |||
| >>>>>>>>>>>>>>>>>>>+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>> | ENSRNOT00000033942 ENSRNOG00000000419 Cfb | ||
| >>>>>>>>>>>>>>>>>>>+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>> | ENSRNOT00000000477 ENSRNOG00000000419 Cfb | ||
| rat | ((((((......(((.(((.((.......(((.(((((..((((........)))).))))))))...))))).)))....)))))). | 0.690 -33.20 |
| rat | chromosome:20:4074999:4075086:1 | Same_strand|Intronic_coding|ENSRNOT00000033942|ENSRNOG00000000419 ## Same_strand|Boundary_non-coding|ENSRNOT00000060607|ENSRNOG00000000419 ## ENSRNOG00000000419|protein_coding|Cfb|complement factor B [Source:RefSeq_peptide;Acc:NP_997631] |
block1096018 [novel_lenNOK_shortStem_mirtron_randfoldOK_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.008 | no | no | 0.38/0.38 | 26/26/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 2 | 20 | 5arm | 1 | 1 | 0.35 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---CUUCUUU---------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T3S2 | |||
| --TCTTCTTTGTCTCTGTGTCACTAAGA---------------------------------------------------------------------- | 26 | 1 | |
| rat | ggTCTTCTTTGTCTCTGTGTCACTAAGAcaggacagcctctgttgtctgcagagattcagagcttctcttgtcagtaccctgaagtcacagagggctt | ||
| ************************************************************************************************** | |||
| ++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000000631 ENSRNOG00000000524 RGD735065 | ||
| ++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000041461 ENSRNOG00000000524 RGD735065 | ||
| rat | ((((((((.((.((....((.(((..(((((((.((.(((((..((((....)))).)))))))..)))))))))))).....)).)).)))))))). | 0.630 -31.00 |
| rat | chromosome:20:7602160:7602257:1 | Same_strand|Boundary_coding|ENSRNOT00000041461|ENSRNOG00000000524 ## ENSRNOG00000000524|protein_coding|RGD735065|Uncharacterized protein C6orf89 homolog. [Source:UniProtKB/Swiss-Prot;Acc:Q6P6G2] |
block2157226 [novel_lenNOK_shortStem_mirtron_randfoldOK_nonpairedHIGH_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.004 | no | no | 0.58/0.62 | 18/21/0.56 | 0.2 | 1.4 | 9 | 0 | 2 | 0 | 0 | 14 | 3arm | 2 | 0 | 0.32 | 4 | 9 | 2 | na | na |
| reads | miRBase family seed | |||
| seed | ----------------------------------------------------------CACUCCA------------- | 7 | novel | |
| seed | ---------------------------------------------------------CCACUCC-------------- | 2 | novel | |
| len | cloning frequencies | |||
| T2S1 | T2S2 | |||
| ---------------------------------------------------------CCACTCCATCTCCACTCCCAG | 21 | 1 | 3 | |
| ---------------------------------------------------------CCACTCCATCTCCACTCC--- | 18 | - | 2 | |
| --------------------------------------------------------TCCACTCCATCTCCACTCC--- | 19 | - | 2 | |
| ---------------------------------------------------------CCACTCCATCTCCACTCCCA- | 20 | 1 | - | |
| rat | tgaggaatgcaggtgtgcacagggagatatgggcagtccattgatttgcttgtatcTCCACTCCATCTCCACTCCCAG | |||
| ****************************************************************************** | ||||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>> | ENSRNOT00000046024 ENSRNOG00000029128 Cyp2d5 | |||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>> | ENSRNOT00000056021 ENSRNOG00000029128 Cyp2d5 | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000056020 ENSRNOG00000029128 Cyp2d5 | |||
| rat | ((.(((.((.(((((.......(((((((..(((((((....)))).)))..)))))))....))))).)).))))). | 0.980 -29.50 | ||
| rat | chromosome:7:120762972:120763049:-1 | Same_strand|Intronic_coding|ENSRNOT00000046024|ENSRNOG00000029128 ## ENSRNOG00000029128|protein_coding|Cyp2d5|Cytochrome P450 2D10 (EC 1.14.14.1) (CYPIID10) (P450-DB5) (P450-CMF1B) (Debrisoquine 4-hydroxylase). [Source:UniProtKB/Swiss-Prot;Acc:P12939] |
novel_multiarm_5varHIGH_loopOverlap_bulgeHIGH (3 loci)
block870810 [novel_multiarm_5varHIGH_loopOverlap_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.031 | no | no | 0.25/0.35 | 20/26/0.86 | 4.8 0.0 | 5.0 0.0 | 5 2 | 0 0 | 3 1 | 0 0 | 21 40 | -13 -18 | 5arm_loop_3arm 5arm_loop_3arm | 1 1 | nd nd | 0.27 0.50 | 5 5 | 7 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | -----------------------------------------CUCUUUG----------------------------------------- | 2 | novel | ||
| seed | -------------------------GCUCAAU--------------------------------------------------------- | 2 | novel | ||
| seed | --------------------------------GUUUUUU-------------------------------------------------- | 2 | novel | ||
| seed | ----------------------GAUGCUC------------------------------------------------------------ | 1 | novel | ||
| len | cloning frequencies | ||||
| T3S1 | T3S2 | T5S1 | |||
| -------------------------------TGTTTTTTATCTCTTTGGTGTTTT---------------------------------- | 24 | - | - | 2 | |
| ----------------------------------------TCTCTTTGGTGTTTTAAGAC----------------------------- | 20 | - | - | 2 | |
| ------------------------TGCTCAATGTTTTTTATCTCT-------------------------------------------- | 21 | 1 | - | - | |
| ------------------------TGCTCAATGTTTTTTATCTCTTTGGT--------------------------------------- | 26 | - | - | 1 | |
| ---------------------TGATGCTCAATGTTTTTTATCTCT-------------------------------------------- | 24 | - | 1 | - | |
| rat | accccagcccacagctgagcaTGATGCTCAATGTTTTTTATCTCTTTGGTGTTTTAAGACcttgggtgctcttgtcttttgctgaggta | ||||
| ***************************************************************************************** | |||||
| rat | (((.((((.....((.((((.....((((((.(((((.((((.....))))....))))).))))))))))..)).....)))).))). | 0.970 -24.50 | |||
| rat | chromosome:1:102017717:102017805:-1 | intergenic |
block1766981 [novel_multiarm_5varHIGH_loopOverlap_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.333 | no | no | 0.45/0.50 | 19/23/0.89 | 0.0 1.1 | 1.0 0.3 | 2 7 | 0 0 | 2 3 | 0 0 | 35 42 | -5 -14 | 5arm_loop 5arm_loop_3arm | 1 1 | nd nd | 0.30 0.52 | 4 12 | 9 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | -----------------------------------------------UGGCAUC---------------------------------------------------------------- | 4 | novel | ||
| seed | ------------------------------------GCUUUCA--------------------------------------------------------------------------- | 2 | novel | ||
| seed | --------------------------------------------CACUGGC------------------------------------------------------------------- | 1 | novel | ||
| seed | ------------------------------------------------GGCAUCU--------------------------------------------------------------- | 1 | novel | ||
| seed | -------------------------------------------ACACUGG-------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T4S1 | T5S1 | |||
| ----------------------------------------------CTGGCATCTTCATCTGTCTG---------------------------------------------------- | 20 | 1 | - | 3 | |
| -------------------------------------------ACACTGGCATCTTCATCTGTCTG---------------------------------------------------- | 23 | - | - | 1 | |
| ------------------------------------------AACACTGGCATCTTCATCTGTC------------------------------------------------------ | 22 | - | 1 | - | |
| -----------------------------------------------TGGCATCTTCATCTGTCTG---------------------------------------------------- | 19 | - | - | 1 | |
| -----------------------------------TGCTTTCAACACTGGCATCTTC------------------------------------------------------------- | 22 | - | 1 | - | |
| -----------------------------------TGCTTTCAACACTGGCATCT--------------------------------------------------------------- | 20 | - | - | 1 | |
| rat | ttctacagcctcttgtcactagaatcctcttctttTGCTTTCAACACTGGCATCTTCATCTGTCTGccccagtgagagagctgttgcctgggacttaaggatgactcgctctgagagc | ||||
| ********************************************************************************************************************** | |||||
| rat | ((((..(((...(((((.((.((.((((........((((((..((((((((............))))..)))).))))))........)))).)).)))))))...)))...)))). | 0.820 -27.19 | |||
| rat | chromosome:5:114554809:114554926:-1 | intergenic |
sblock10799 [novel_multiarm_5varHIGH_loopOverlap_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.286 | no | no | 0.40/0.45 | 19/24/0.75 | 0.0 0.0 1.5 | 0.0 0.0 1.0 | 1 1 2 | 0 0 0 | 1 1 2 | 0 0 0 | 26 41 5 | -4 -21 3 | 5arm_loop_3arm 5arm_loop_3arm 3arm | 1 1 1 | nd nd nd | 0.45 0.45 0.29 | 4 4 4 | 4 | 3 | na | na |
| reads | miRBase family seed | ||||
| seed | -----------------------------------------------------GGCAAGU------------------ | 1 | novel | ||
| seed | ---------------------------ACUUAUC-------------------------------------------- | 1 | novel | ||
| seed | ------------------------------------------CCACAGU----------------------------- | 1 | novel | ||
| seed | --------------------------------------------------AAUGGCA--------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T5S1 | T5S2 | |||
| -------------------------------------------------CAATGGCAAGTTCTAATTCCCTTC----- | 24 | - | - | 1 | |
| --------------------------TACTTATCATTCTCCTCCAC-------------------------------- | 20 | - | 1 | - | |
| -----------------------------------------TCCACAGTCAATGGCAAGTTCT--------------- | 22 | 1 | - | - | |
| ----------------------------------------------------TGGCAAGTTCTAATTCCCT------- | 19 | - | 1 | - | |
| rat | tcaactggtttcagggctgcaagtacTACTTATCATTCTCCTCCACAGTCAATGGCAAGTTCTAATTCCCTTCggttg | ||||
| ****************************************************************************** | |||||
| rat | .(((((((....((((.....((....((((..((((...((....))..))))..)))).))....))))))))))) | 0.980 -13.80 | |||
| rat | chromosome:7:31864380:31864457:-1 | intergenic |
novel_multiarm_DicerNOK_5varHIGH_loopOverlap_randfoldOK (3 loci)
sblock5722 [novel_multiarm_DicerNOK_5varHIGH_loopOverlap_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.002 | no | no | 0.57/0.72 | 18/23/0.75 | 0.0 0.0 1.3 | 0.0 0.0 2.7 | 3 2 3 | 0 0 0 | 1 1 3 | 0 0 0 | 25 32 27 | 0 -3 1 | 5arm 5arm_loop 3arm | 1 1 1 | nd nd nd | 0.18 0.33 0.33 | 2 4 3 | 8 | 4 | 1 | 0 |
| reads | miRBase family seed | |||||
| seed | --------------------------GUGUGAG---------------------------------------------------------------------------- | 3 | novel | |||
| seed | ---------------------------------CCUGGCU--------------------------------------------------------------------- | 2 | novel | |||
| seed | ------------------------------------------------------------UGUCACU------------------------------------------ | 2 | novel | |||
| seed | ----------------------------------------------------------GCUGUCA-------------------------------------------- | 1 | novel | |||
| len | cloning frequencies | |||||
| T1S2 | T3S1 | T3S2 | T4S2 | |||
| -------------------------AGTGTGAGCCTGGCTGCAGCAC-------------------------------------------------------------- | 22 | - | - | 3 | - | |
| -----------------------------------------------------------CTGTCACTCAGGGTCACTCCATC--------------------------- | 23 | 1 | 1 | - | - | |
| --------------------------------GCCTGGCTGCAGCACCTG----------------------------------------------------------- | 18 | - | - | 2 | - | |
| ---------------------------------------------------------TGCTGTCACTCAGGGTCACTC------------------------------- | 21 | - | - | - | 1 | |
| rat | aggcagggtggtgtcaaagaacaccAGTGTGAGCCTGGCTGCAGCACCTGtcagaagTGCTGTCACTCAGGGTCACTCCATCactggtgggtgaaatgatacaatgtct | |||||
| ************************************************************************************************************* | ||||||
| ----------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000000824 ENSRNOG00000000661 NP_001100618.1 | |||||
| rat | (((((.....((((((.....(((((((((((.((((..((((((((.........)))))).))..)))).))))......))))))).......))))))..))))) | 0.980 -43.70 | ||||
| rat | chromosome:19:14328858:14328966:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000000824|ENSRNOG00000000661 ## ENSRNOG00000000661|protein_coding|NP_001100618.1|Hermansky-Pudlak syndrome 4 homolog [Source:RefSeq_peptide;Acc:NP_001100618] |
sblock6188 [novel_multiarm_DicerNOK_5varHIGH_loopOverlap_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.009 | no | no | 0.38/0.61 | 18/21/0.75 | 0.0 0.0 2.5 | 0.0 0.0 2.5 | 1 1 2 | 0 0 0 | 1 1 2 | 0 0 0 | 13 56 0 | -2 -16 35 | 5arm_loop 3arm_loop 3arm | 1 1 1 | nd nd nd | 0.22 0.76 0.57 | 3 15 10 | 4 | 3 | 0 | 0 |
| reads | miRBase family seed | ||||
| seed | ---------------------------------------------------------------------------------CCCACUG------------------ | 1 | novel | ||
| seed | --------------------------------------------------------------------------------------UGGAGCA------------- | 1 | novel | ||
| seed | --------------CCGGUAA------------------------------------------------------------------------------------- | 1 | novel | ||
| seed | ------------------------------CAGGUUU--------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T2S2 | T3S1 | T5S1 | |||
| -------------GCCGGTAAACTGCAGCAC--------------------------------------------------------------------------- | 18 | - | 1 | - | |
| -----------------------------ACAGGTTTAACAATTAGCTGC-------------------------------------------------------- | 21 | 1 | - | - | |
| --------------------------------------------------------------------------------ACCCACTGGAGCATGCAACAC----- | 21 | - | 1 | - | |
| -------------------------------------------------------------------------------------CTGGAGCATGCAACACCAATT | 21 | - | - | 1 | |
| rat | gctctagggagggGCCGGTAAACTGCAGCACAGGTTTAACAATTAGCTGCcgggttgctgtggcccaaaagaaaaaataaACCCACTGGAGCATGCAACACCAATT | ||||
| ********************************************************************************************************** | |||||
| -------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000019129 ENSRNOG00000014002 St7l | ||||
| -------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000056003 ENSRNOG00000014002 St7l | ||||
| -------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000056001 ENSRNOG00000014002 St7l | ||||
| rat | (((((((((..((((((((((.(((((((................))))).)).)))))..)))))................)).))))))).............. | 0.970 -33.16 | |||
| rat | chromosome:2:200126620:200126725:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000019129|ENSRNOG00000014002 ## ENSRNOG00000014002|protein_coding|St7l|suppression of tumorigenicity 7-like [Source:RefSeq_peptide;Acc:NP_001007640] |
sblock8024 [novel_multiarm_DicerNOK_5varHIGH_loopOverlap_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.005 | no | no | 0.50/0.61 | 18/23/0.83 | 0.0 0.0 4.2 | 0.0 0.0 3.5 | 1 1 4 | 0 0 0 | 1 1 1 | 0 0 0 | 14 41 7 | 12 -17 -1 | 5arm 5arm_loop_3arm 3arm | 1 1 1 | nd nd nd | 0.50 0.20 0.09 | 6 4 2 | 6 | 1 | -12 | 2 |
| reads | miRBase family seed | ||
| seed | ---------------GGCAGGA--------------------------------------------------------------- | 1 | novel |
| seed | ----------------------------------------------------GCCAGUU-------------------------- | 1 | novel |
| seed | ------------------------------------------CUCCAGA------------------------------------ | 1 | novel |
| seed | --------------------------------------------------AUGCCAG---------------------------- | 1 | novel |
| seed | ------------------------------------------------AGAUGCC------------------------------ | 1 | novel |
| seed | -----------------------------------------------------------GUACAGG------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| -----------------------------------------------GAGATGCCAGTTGTACAGGTCCA--------------- | 23 | 1 | |
| ---------------------------------------------------TGCCAGTTGTACAGGTCCAACAC----------- | 23 | 1 | |
| -------------------------------------------------GATGCCAGTTGTACAGGTCCAAC------------- | 23 | 1 | |
| ----------------------------------------------------------TGTACAGGTCCAACACGGAG------- | 20 | 1 | |
| -----------------------------------------TCTCCAGAGATGCCAGTTGT------------------------ | 20 | 1 | |
| --------------TGGCAGGAAGCCCCTTAC----------------------------------------------------- | 18 | 1 | |
| rat | tcctgatccactgtTGGCAGGAAGCCCCTTACagctggcagTCTCCAGAGATGCCAGTTGTACAGGTCCAACACGGAGcccaggg | ||
| ************************************************************************************* | |||
| rat | .((((.(((..((((((......(((...(((((((((((.(((....))))))))))))))..))))))))).)))...)))). | 0.630 -36.90 |
| rat | chromosome:3:76958654:76958738:1 | intergenic |
novel_multiarm_DicerNOK_Multihit_5varHIGH (3 loci)
sblock1614 [novel_multiarm_DicerNOK_Multihit_5varHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.207 | no | no | 0.43/0.60 | 20/24/1.00 | 3.0 0.0 0.0 | 2.0 0.0 0.0 | 2 2 1 | 0 0 0 | 2 1 1 | 0 0 0 | 9 23 26 | 22 15 1 | 5arm 5arm 3arm | 21 21 21 | nd nd nd | 0.33 0.43 0.20 | 3 3 2 | 5 | 2 | -8 | -4 |
| reads | miRBase family seed | |||
| seed | ------------------------AAGCAAC------------------------------------------------------------------------------- | 2 | novel | |
| seed | -----------------------------------------------------------------ACCUGUC-------------------------------------- | 1 | novel | |
| seed | ----------CCAGAGA--------------------------------------------------------------------------------------------- | 1 | novel | |
| seed | ----------------ACAGAGC--------------------------------------------------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T1S1 | T5S1 | |||
| -----------------------TAAGCAACACAGAGCAAACTG------------------------------------------------------------------ | 21 | - | 2 | |
| ----------------------------------------------------------------TACCTGTCCTTGCCTGCCTG-------------------------- | 20 | - | 1 | |
| ---------ACCAGAGACAGAGCTAAGCAACAC----------------------------------------------------------------------------- | 24 | 1 | - | |
| ---------------GACAGAGCTAAGCAACACAGAG------------------------------------------------------------------------- | 22 | - | 1 | |
| rat | gaaatggatACCAGAGACAGAGCTAAGCAACACAGAGCAAACTGggtagaacaaagtacaaaggTACCTGTCCTTGCCTGCCTGccgcttattttttggatgctgtctcc | |||
| ************************************************************************************************************** | ||||
| ------------------------------------------------------------------------------------------------------------------------ | ENSRNOT00000048246 ENSRNOG00000039174 RGD1563865_predicted | |||
| rat | ((.((((...(((((((..((((...(((...(((.((((...((..((......((((....))))))..)))))))))..))).))))..)))))))...)))).)). | 0.740 -27.60 | ||
| rat | chromosome:1:52237569:52237678:1 | Opposite_strand|Boundary_non-coding|ENSRNOT00000059936|ENSRNOG00000039174 ## Opposite_strand|Intronic_non-coding|ENSRNOT00000048246|ENSRNOG00000039174 ## ENSRNOG00000039174|protein_coding|RGD1563865_predicted| |
| Back to summary page | other hairpins: | Page 1 | Jump 10 pages back | Previous page | Page 31129 | Next page | Jump 10 pages forward | Page 31204 |
©2008 InteRNA Genomics B.V.