block1030491_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block1030491_cand 5arm | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block1030491_cand 5arm | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block1030491 [novel_mirtron_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.007 | no | no | 0.48/0.48 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 22 | 2 | 5arm | 1 | 2 | 0.14 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------CACCUAU------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T2S1 | |||
| ----------------------TCACCTATTCTCTCACTTGCC----------------------------------------------------------------- | 21 | 1 | |
| rat | agtacagggagtcaggaaggatTCACCTATTCTCTCACTTGCCaggttctgtgaggtggccaaagagaatggcatggacgtcttccggatctttgactcccttaacta | ||
| ************************************************************************************************************ | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | ENSRNOT00000026316 ENSRNOG00000019372 Pc | ||
| rat | (((..(((((((((((((((.((((.((((((((((((((..(((...)))..))))).....)))))))))..))))..)))))).......)))))))))..))). | 0.730 -39.21 |
| rat | chromosome:1:207210013:207210120:1 | Same_strand|Intronic_coding|ENSRNOT00000026316|ENSRNOG00000019372 ## ENSRNOG00000019372|protein_coding|Pc|Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1) (Pyruvic carboxylase) (PCB). [Source:UniProtKB/Swiss-Prot;Acc:P52873] |
©2008 InteRNA Genomics B.V.