miR-Intess: block1048982

block1048982_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.010	no	no	0.52/0.55	21/22/1.00	0.0	0.5	2	0	2	0	23	11	3arm	1	0	0.19	3	2	2	na	na

		reads	miRBase family seed
seed	---------------------------------------------------------------------GGUCUGU-------------------------------------	2	novel
		len	cloning frequencies
			T1S1	T1S2
	--------------------------------------------------------------------TGGTCTGTCTTTGTACCCCCAG-----------------------	22	-	1
	--------------------------------------------------------------------TGGTCTGTCTTTGTACCCCCA------------------------	21	1	-
rat	agggaccttgagggttttaatattgggggttcaaggatgggggaatattgtggaggggcagatataacTGGTCTGTCTTTGTACCCCCAGgaagactccaactatggtgttct
	*****************************************************************************************************************
	+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>	ENSRNOT00000021171 ENSRNOG00000015442 Sfxn3
	+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000047025 ENSRNOG00000015442 Sfxn3
	+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>>>>>>	ENSRNOT00000054707 ENSRNOG00000015442 Sfxn3
rat	.(((((((((.(((((((....((((((((.(((((((((((..(((((((......)))).)))..))...))))))))).)))))))).))))))))).....)).)))))	0.920 -37.90

rat