block106348_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block106348_cand 3arm | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block106348_cand 3arm | 0 | 0 | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 |
block106348 [novel_mirtron_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.006 | no | no | 0.67/0.67 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 15 | 3 | 3arm | 1 | 1 | 0.29 | 3 | 1 | 1 | na | na |
| Member of family novel56 (seed CAGCCUC): block2225001_cand, block106348_cand, block1418222_cand |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------CAGCCUC---------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T3S2 | |||
| ----------------------------------------------------TCAGCCTCCACCGCCTACCCA--------------- | 21 | 1 | |
| rat | tgagtgcaagagggcggtgggtggcgggagctggtgggacagggacgggcccTCAGCCTCCACCGCCTACCCAggccctgtgtgtcaa | ||
| **************************************************************************************** | |||
| -------------------------------------------------------------------------------------------------- | ENSRNOT00000054970 ENSRNOG00000036697 Mafg | ||
| >>>>+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>> | ENSRNOT00000054953 ENSRNOG00000036685 Npb | ||
| rat | (((.((((..((((((((((((((.((..(((((.(((...........))))))))..)).)))))))))...))))).))))))). | 1.000 -46.30 |
| rat | chromosome:10:110000077:110000164:1 | Opposite_strand|Boundary_non-coding|ENSRNOT00000051462|ENSRNOG00000036697 ## Opposite_strand|Intronic_non-coding|ENSRNOT00000054970|ENSRNOG00000036697 ## Same_strand|Intronic_coding|ENSRNOT00000054953|ENSRNOG00000036685 ## ENSRNOG00000036685|protein_coding|Npb|Neuropeptide B precursor (Preproprotein L7) (rPPL7) [Contains: Neuropeptide B-29 (NPB29) (L7C)]. [Source:UniProtKB/Swiss-Prot;Acc:Q8K4P2] ## ENSRNOG00000036697|protein_coding|Mafg|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G [Source:RefSeq_peptide;Acc:NP_071781] |
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