block117976_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block117976_cand 3arm | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block117976_cand 3arm | 0 | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 |
block117976 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.57/0.57 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 10 | 4 | 3arm | 1 | nd | 0.19 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------UAGCAGC----------------------- | 1 | novel |
| len | cloning frequencies | ||
| T3S1 | |||
| ----------------------------------------------------GTAGCAGCTTCCTGCCTCTGA---------- | 21 | 1 | |
| rat | cagtgttccaaggccagagagcagtgaactgcttctgacaaaatgatctgcaGTAGCAGCTTCCTGCCTCTGAatttaacact | ||
| *********************************************************************************** | |||
| --------------------------------------------------------------------------------------------- | ENSRNOT00000002752 ENSRNOG00000002010 Mrps6 | ||
| rat | .((((((..(((..(((((.((((.((((((((.(((.((........))))).))))).))))))))))))..))))))))) | 1.000 -32.80 |
| rat | chromosome:11:32090450:32090532:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000002752|ENSRNOG00000002010 ## ENSRNOG00000002010|protein_coding|Mrps6|mitochondrial ribosomal protein S6 Gene [Source:MGI (curated);Acc:Mrps6-001] |
©2008 InteRNA Genomics B.V.