block130621_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block130621_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.100 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block130621_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.000 |
block130621 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.38/0.38 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 29 | 0 | 5arm | 10 | nd | 0.24 | 2 | 1 | 1 | na | na |
| Member of family novel20 (seed CCAUAUC): block130621_cand, block533865_cand, block702541_cand, block1234980_cand |
| reads | miRBase family seed | ||
| seed | ------------------------------CCAUAUC---------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S2 | |||
| -----------------------------ACCATATCAATGCAGCCATTT--------------------------------------------------- | 21 | 1 | |
| rat | ggggacagagttcccaggacaaggctgcaACCATATCAATGCAGCCATTTcagtaccaaggatgtctgaattgatatatgttttcctgtcctggggttccc | ||
| ***************************************************************************************************** | |||
| rat | ((((((......((((((((.(((..(((...((((((((.(((.(((((.........))))).))).)))))))).)))...))))))))))))))))) | 0.610 -39.30 |
| rat | chromosome:11:66486025:66486125:-1 | intergenic |
©2008 InteRNA Genomics B.V.