miR-Intess: block136493

block136493_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.007	no	no	0.45/0.45	20/20/1.00	0.0	0.0	1	0	1	0	6	24	5arm	1	nd	0.25	2	1	1	na	na

		reads	miRBase family seed
seed	-------UGAAAGA--------------------------------------------------------------------------------------------------------	1	novel
		len	cloning frequencies
			T5S2
	------CTGAAAGAACTGGGAAACTG--------------------------------------------------------------------------------------------	20	1
rat	AGGAAACTGAAAGAACTGGGAAACTGAAACTGTTCTTTGTTCTCTCTCTCTCCCAGAATTGAGGAAGAAGACAGAGAGCTGCCTACTAA-CCAGGGTCTTAGCTTTCACCT-------
mouse	TGGAAACTGAAAGAACCGGGAAACTGAAACTGTTCTTTGT--TTCCTCTCTCCCAGATTTGAG---GAAGACAGTGAGCTGCTGAGTAACCCGGGGCCTCAGCTTCCACACCTCTGAG
	************* ********************* * ********** * **** ***** * * * *** *
	.................................................................>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>	ENSRNOT00000043660 ENSRNOG00000028895 NP_001101791.1
rat	(((....((((((..((((((..(((.....(((((((((..(((..(((..........)))..)))..))))))))).......... .)))..)))))))))))))))	0.530 -34.09
mouse	(((((.((((.....(((((..(((......((((.(((( ((((((............))) )).))))).)))).....)))..)))))....)))).)))))..........	0.941 -36.00

rat	chromosome:11:79438479:79438588:-1	intergenic
mouse	chromosome:16:23609961:23610073:1	Same_strand\|Boundary_non-coding\|ENSMUST00000038423\|ENSMUSG00000033355\|protein_coding\|receptor transporter protein 4 Gene [Source:MGI Symbol;Acc:MGI:1915025]