block140175_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block140175_cand 5arm | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block140175_cand 5arm | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 |
block140175 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.010 | no | no | 0.60/0.60 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 14 | 3 | 5arm | 1 | nd | 0.30 | 3 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------GGCACAG-------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T2S2 | |||
| --------------AGGCACAGCCACCTTCAGAC-------------------------------------------------- | 20 | 1 | |
| rat | GTTCTATGCCCCGCAGGCACAGCCACCTTCAGACCAGGAAACTATTTGAGGACTAGTTGGAGCCTGCAGGTCCAATCAGGAATC | ||
| mouse | --------------AGGCACAGCCACCTTCCCGTGAGGAG------TGAGG-CTCGCTGTGGCCT------------------- | ||
| **************** **** ***** ** * ** **** | |||
| ---------------------------------------------------------------------------------------------- | ENSRNOT00000002576 ENSRNOG00000000281 LOC680409 | ||
| rat | (((((.((..((((((((.((((...(((((((..((....)).)))))))....))))..)))))).))..))....))))). | 0.830 -29.50 | |
| mouse | (((((((((..((((.((....)).. .)))) ...)))))).))) | 1.000 -20.30 |
| rat | chromosome:11:84910286:84910369:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000002576|ENSRNOG00000000281 ## ENSRNOG00000000281|protein_coding|LOC680409| |
| mouse | chromosome:1:133739226:133739349:-1 | Opposite_strand|Intronic_coding|ENSMUST00000086559|ENSMUSG00000013275|protein_coding|solute carrier family 41, member 1 Gene [Source:MGI (curated);Acc:Slc41a1-001] |
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