miR-Intess: block151455

block151455_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.003	no	no	0.53/0.56	18/19/0.00	0.0	0.2	14	0	7	0	16	13	5arm	1	nd	0.11	1	14	7	na	na

		reads	miRBase family seed
seed	-----------------AACACCA-------------------------------------------------------------------------------------	14	novel
		len	cloning frequencies
			T1S1	T1S2	T2S1	T3S2	T4S2	T5S1	T5S2
	----------------TAACACCACCCAGGGCTA---------------------------------------------------------------------------	18	3	2	-	1	1	2	2
	----------------TAACACCACCCAGGGCTAT--------------------------------------------------------------------------	19	1	-	1	-	1	-	-
rat	tcttttgggattgcacTAACACCACCCAGGGCTATtggaccatgctgcagtttcttccagcagcttctccagagttcatttggagtcagtgttaggcactcatggaaga
	*************************************************************************************************************
	-----------------------------------------------------------------------------------------------------------------------	ENSRNOT00000050073 ENSRNOG00000001575 Grik1
	-----------------------------------------------------------------------------------------------------------------------	ENSRNOT00000046043 ENSRNOG00000001575 Grik1
	-----------------------------------------------------------------------------------------------------------------------	ENSRNOT00000042581 ENSRNOG00000001575 Grik1
	-----------------------------------------------------------------------------------------------------------------------	ENSRNOT00000051060 ENSRNOG00000001575 Grik1
rat	((((((..((.(((.(((((((.((((((((((.(((((....(((((...........)))))...))))))))))...))).))..)))))))))).))..))))))	0.840 -38.00

rat