block1552843_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block1552843_cand 3arm | 0 | 1 | 6 | 11 | 6 | 6 | 1 | 2 | 0 | 1 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block1552843_cand 3arm | 0 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0 | 0.000 |
block1552843 [novel_cloningOK_shortStem_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.35/0.37 | 19/20/0.88 | 0.0 | 0.0 | 25 | 0 | 8 | 0 | 2 | 6 | 3arm | 1 | nd | 0.15 | 2 | 34 | 8 | na | na |
| reads | miRBase family seed | |||||||||
| seed | ---------------------------------------GUGUUUU-------------- | 34 | novel | |||||||
| len | cloning frequencies | |||||||||
| T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S2 | |||
| --------------------------------------TGTGTTTTGTGTGTGAATGT-- | 20 | 1 | 6 | 9 | 6 | 4 | 1 | 2 | 1 | |
| --------------------------------------TGTGTTTTGTGTGTGAATG--- | 19 | - | - | 2 | - | 2 | - | - | - | |
| rat | tacatacatacatacatacatacatacatacatatgttTGTGTTTTGTGTGTGAATGTac | |||||||||
| ************************************************************ | ||||||||||
| ---------------------------------------------------------------------- | ENSRNOT00000008688 ENSRNOG00000006617 Cntnap2 | |||||||||
| rat | (((((.((((((((.(((((.(((((......))))).)))))..)))))))).))))). | 1.000 -19.70 | ||||||||
| rat | chromosome:4:73743080:73743139:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000008688|ENSRNOG00000006617 ## ENSRNOG00000006617|protein_coding|Cntnap2|contactin associated protein-like 2 Gene [Source:MGI (curated);Acc:Cntnap2-001] |
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