block175383_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block175383_cand 3arm | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block175383_cand 3arm | 0 | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 |
block175383 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.002 | no | no | 0.52/0.52 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 12 | 2 | 3arm | 1 | nd | 0.14 | 1 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ------------------------------------------------GGAACUG------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T3S1 | |||
| -----------------------------------------------TGGAACTGTCCCTTCTGCTCT------------ | 21 | 1 | |
| rat | ggctgaagtatgaagtagaaggacagctcccgggatcctcagtaactTGGAACTGTCCCTTCTGCTCTacacttgcagtc | ||
| ******************************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000002549 ENSRNOG00000001866 Pik4ca | ||
| rat | (((((((((.((.(((((((((((((.(((.((............)).))).)))))).))))))).)).)))).))))) | 1.000 -32.30 |
| rat | chromosome:11:85646836:85646915:1 | Same_strand|Intronic_coding|ENSRNOT00000002549|ENSRNOG00000001866 ## ENSRNOG00000001866|protein_coding|Pik4ca|phosphatidylinositol 4-kinase a [Source:RefSeq_peptide;Acc:NP_071637] |
©2008 InteRNA Genomics B.V.