block180651_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block180651_cand 3arm | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block180651_cand 3arm | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block180651 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.008 | no | no | 0.25/0.25 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 6 | 15 | 3arm | 1 | nd | 0.30 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------------------UUGUAUU------------------ | 1 | novel |
| len | cloning frequencies | ||
| T1S2 | |||
| ----------------------------------------------------------------TTTGTATTTCTTTTTTCCTG------ | 20 | 1 | |
| rat | cccttctcacagggaaggaattagactttgcatgcgcatgctcagtttagatgtttgtttttgtTTTGTATTTCTTTTTTCCTGagaagg | ||
| ****************************************************************************************** | |||
| ---------------------------------------------------------------------------------------------------- | ENSRNOT00000001248 ENSRNOG00000000940 Flt1 | ||
| rat | .((((((((..(((((((((....((...(((...(((.((((......)).)).)))...)))...))..)))))))))..)))))))) | 0.480 -25.20 |
| rat | chromosome:12:7959059:7959148:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000001248|ENSRNOG00000000940 ## Opposite_strand|Boundary_non-coding|ENSRNOT00000061189|ENSRNOG00000000940 ## ENSRNOG00000000940|protein_coding|Flt1|Vascular endothelial growth factor receptor 1 precursor (EC 2.7.10.1) (VEGFR-1) (Tyrosine-protein kinase receptor FLT) (FLT-1). [Source:UniProtKB/Swiss-Prot;Acc:P53767] ## {Repeats: dust 7959069 7959085 0 class=dust} |
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