miR-Intess: block183874

block183874_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.002	no	no	0.57/0.57	23/23/1.00	0.0	0.0	1	0	1	0	15	17	3arm	1	nd	0.17	2	1	1	na	na

		reads	miRBase family seed
seed	-----------------------------------------------------------------------------------CUCUUUC------------------------------	1	novel
		len	cloning frequencies
			T2S2
	----------------------------------------------------------------------------------CCTCTTTCCAGGAGACAGGTTCC---------------	23	1
rat	GGGCTCTCCACCAGCATTGTCAGGGGCCTAGTCTC-TCCTGCAAGGAGATCTGACTAGTTGTCAGAACTATGT-----GAAACCTCTTTCCAGGAGACAGGTTCCCCTCTGGCTGGCCCA
mouse	----TCT--------------------TTAGTCTTATCCTGTAAGGTAGTCTGACAAGTTGTTACAACTATATATTTAAAAATCTCTTTCCAGGAGACAAAGTG----------------
	* ** * ** **** * ****** * * ************** *
	++++++++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000031149 ENSRNOG00000001103 RGD1560686_predicted
rat	(((((.....((((.......((((((((....(( (((((.((((((.((((((.....))))))....... .....)))))).))))))).)))..)))))))))..))))).	0.550 -44.23
mouse	.(( ((.(((...(((((.((((((((.((((.....))))..))))...............)))).))))))))))))..	0.611 -12.96

rat	chromosome:12:12954267:12954380:-1	Same_strand\|Intronic_coding\|ENSRNOT00000031149\|ENSRNOG00000001103 ## ENSRNOG00000001103\|protein_coding\|RGD1560686_predicted\|
mouse	chromosome:4:64005464:64005617:1	intergenic