miR-Intess: block188259

block188259_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.001	no	no	0.45/0.45	22/22/1.00	0.0	0.0	1	0	1	0	29	3	3arm	1	nd	0.14	2	1	1	na	na

		reads	miRBase family seed
seed	---------------------------------------------------------------UUACAAU-------------------------------------------	1	novel
		len	cloning frequencies
			T2S2
	--------------------------------------------------------------CTTACAATTTCTCCCTTTCCCC-----------------------------	22	1
rat	agggtggagactgggatcatggctcagttgatagagagaggggagagtgtggggtgtgccacCTTACAATTTCTCCCTTTCCCCtgatcccttctcttcccagctctaaccct
	*****************************************************************************************************************
	+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000059611 ENSRNOG00000001404 NP_001100601.1
	---------------------------------------------------------------------------------------------------------------------------	ENSRNOT00000059593 ENSRNOG00000024616 MGC125073
	---------------------------------------------------------------------------------------------------------------------------	ENSRNOT00000059592 ENSRNOG00000024616 MGC125073
	---------------------------------------------------------------------------------------------------------------------------	ENSRNOT00000039280 ENSRNOG00000024616 MGC125073
rat	(((((((((.((((((....((.((((......(((((.(((((((.(((((((((...))))))))).))))))))))))..)))).)).......))))))))))).))))	0.610 -52.60

rat