block198433_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block198433_cand 5arm | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block198433_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 |
block198433 [novel_mirtron_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.003 | no | no | 0.55/0.55 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 19 | 15 | 5arm | 1 | 1 | 0.30 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | --------------------UGAGAAC--------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T3S2 | |||
| -------------------GTGAGAACAGGACTGTGAGC--------------------------------------------------------------------------- | 20 | 1 | |
| rat | gccagcaaacaggaggatgGTGAGAACAGGACTGTGAGCgtgcaagagtgtgtgtgtgcgcgtgcgtgcacgtgtgtagccatcctgtctctctgtcttactcttggcattggt | ||
| ****************************************************************************************************************** | |||
| >>>>>>>>>>>>>>>>>>>>>>>>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000011499 ENSRNOG00000008673 NP_001099403.1 | ||
| rat | (((((....(((((((((((.(((.((((((..((..(((((((...((..(((....)))..)).))))))).....))..))))))))).)))))...))))))...))))) | 0.990 -47.90 |
| rat | chromosome:12:35368962:35369075:-1 | Same_strand|Boundary_coding|ENSRNOT00000011499|ENSRNOG00000008673 ## ENSRNOG00000008673|protein_coding|NP_001099403.1|actin related protein 2/3 complex, subunit 3 [Source:RefSeq_peptide;Acc:NP_001099403] ## {Repeats: dust 35369037 35369043 0 class=dust} |
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