block200765_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block200765_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block200765_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.000 |
block200765 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.004 | no | no | 0.62/0.62 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 22 | 7 | 5arm | 1 | nd | 0.19 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------AGCCUUG-------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S2 | |||
| ----------------------GAGCCTTGCTCCCATGGAGAC------------------------------------------------------------- | 21 | 1 | |
| rat | ttggcctttctgcagttcttacGAGCCTTGCTCCCATGGAGACtgcctgtgtgtgctgcagtctcttgggtgcatgctaggaggcaccatgtcatgagagtcca | ||
| ******************************************************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000001490 ENSRNOG00000001128 RGD1566317_predicted | ||
| rat | .(((.(((((((((((((((...(((..(((.((((.(((((((((..((....)).))))))))))))).))).)))..)))).))..)).)).))))).))) | 0.930 -42.80 |
| rat | chromosome:12:39678907:39679010:-1 | Same_strand|Intronic_coding|ENSRNOT00000001490|ENSRNOG00000001128 ## ENSRNOG00000001128|protein_coding|RGD1566317_predicted| |
©2008 InteRNA Genomics B.V.