block2008260_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block2008260_cand 3arm | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block2008260_cand 3arm | 0 | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 |
block2008260 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.010 | no | no | 0.65/0.65 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 18 | 7 | 3arm | 1 | nd | 0.20 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ------------------------------------------------------------------CAGAGGU------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T3S1 | |||
| -----------------------------------------------------------------GCAGAGGTGGCTTCCCACAG------------------ | 20 | 1 | |
| rat | TAGGGTCTCTGACGTGTGGATAGCCACCTCTCAGACCCTCGCCCAGCTTCCCGTAGAATAGG---GCAGAGGTGGCTTCCCACAGCTACCCAGCAGCTCCTGT | ||
| human | ------------CCAAAGGCTGGCCATC-CTCTGAGCTCCAGCAGGCT--------GATGGGGATGCAGAGGTGGCTTCCCAGGG------------------ | ||
| * ** * **** * *** ** * * * *** ** ** ***************** * | |||
| rat | ((((..(((((...(((((..((((((((((.........((((...(((.....)))..)) ))))))))))))..)))))......))).))..)))). | 0.760 -39.40 | |
| human | ((...((..(((((.( (((((..(((((.((...) ).)))))...)))))))))))..))..)) | 1.000 -29.40 |
| rat | chromosome:6:31916865:31916964:1 | intergenic |
| human | chromosome:22:31418288:31418427:-1 | Same_strand|Intronic_coding|ENST00000358763|ENSG00000185666|protein_coding|Synapsin-3 (Synapsin III) [Source:UniProtKB/Swiss-Prot;Acc:O14994] |
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