block22510_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block22510_cand 5arm | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block22510_cand 5arm | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block22510 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.004 | no | no | 0.52/0.52 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 22 | 1 | 5arm | 1 | nd | 0.19 | 3 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------GUCUGCU-------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T2S1 | |||
| ----------------------CGTCTGCTTGTGGGTTTTCCT------------------------------------------------------- | 21 | 1 | |
| rat | gcatggttgtctccagcccctcCGTCTGCTTGTGGGTTTTCCTgtcagctcaggaagacatctcacgagtttttgtacaaacgctggcttaccacgca | ||
| ************************************************************************************************** | |||
| rat | ((.((((.....(((((.....((...(((((((.(((((((((......)))))))))....)))))))...)).......)))))...)))).)). | 0.970 -35.30 |
| rat | chromosome:10:50090416:50090513:-1 | intergenic |
©2008 InteRNA Genomics B.V.