miR-Intess: block2271299

block2271299_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.001	no	no	0.40/0.40	20/20/1.00	0.0	0.0	1	0	1	0	18	17	3arm	1	0	0.25	2	1	1	na	na

		reads	miRBase family seed
seed	-------------------------------------------------------------------------------CAAAUUC------------------------------	1	novel
		len	cloning frequencies
			T4S2
	------------------------------------------------------------------------------ACAAATTCCTTTCTGCTCAG------------------	20	1
rat	TGTGTGGGGTGGCGGGGCAGATGGGAACTGTGTGGCTAGTGGGGAGAGGCACACTGAGTGTCAGTACTGTCCCCACTCACAAATTCCTTTCTGCTCAGGCTCCTTGGCCCACACAA
mouse	------------TGGGGCAGGTGGGAGCTGTGCGGCTTGTGGGGAGAGGCACGCTGA--GTCAGCACTGTCCCCACTCACAAATTCTTCTCTGCTCAG------------------
	***** * * ********** * ******************* * *********
	>>>>+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>>	ENSRNOT00000014310 ENSRNOG00000010588 NP_001101584.1
rat	((((((((..(((.(((((((.(((((...((((...((((((((.((....((((.....)))).)).))))))))))))..))))).)))))))..)))......)))))))).	1.000 -59.20
mouse	..(((((((..((((.((((......(((((((.((....((((. ..)))).)).))))))).))))..))))..)))))))..	0.787 -36.20

rat	chromosome:7:140850203:140850318:1	Same_strand\|Intronic_coding\|ENSRNOT00000014310\|ENSRNOG00000010588 ## ENSRNOG00000010588\|protein_coding\|NP_001101584.1\|tensin like C1 domain containing phosphatase [Source:RefSeq_peptide;Acc:NP_001101584]
mouse	chromosome:15:101941395:101941550:1	Same_strand\|Boundary_coding\|ENSMUST00000046144\|ENSMUSG00000037003\|protein_coding\|tensin like C1 domain-containing phosphatase Gene [Source:MGI Symbol;Acc:MGI:2387586]