miR-Intess: block2308580

block2308580_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.004	no	no	0.65/0.65	20/20/1.00	0.0	0.0	1	0	1	0	14	2	3arm	1	nd	0.15	3	1	1	na	na

		reads	miRBase family seed
seed	-------------------------------------------------GCUGGGG--------------------------	1	novel
		len	cloning frequencies
			T1S2
	------------------------------------------------TGCTGGGGTCTGGGCACTCA--------------	20	1
rat	CTGACAAGGACTTTGTGCGCCTAGATTCCCAGTTTTGTAAGTGGTAAATGCTGGGGTCTGGGCACTCATAAATCCCTTTTTA
mouse	-------------TGTGCGCCTGGATTCCCAGTTTTGTAAGTGGTAAATGCTGGGGCCTAGGCACTCA--------------
	******* ***************************** ********
	++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000039045 ENSRNOG00000010260 Dixdc1
	++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000013787 ENSRNOG00000010260 Dixdc1
rat	.(((.((((..((((((.(((((((.(((((((.((..........)).))))))))))))))...))))))..)))).)))	1.000 -29.40
mouse	.....((((((..(((((((.((..........)).))))))).)))))).....	1.000 -19.80

rat	chromosome:8:54051538:54051619:-1	Same_strand\|Intronic_coding\|ENSRNOT00000039045\|ENSRNOG00000010260 ## ENSRNOG00000010260\|protein_coding\|Dixdc1\|Dixin (DIX domain-containing protein 1) (Coiled-coil protein DIX1) (Coiled-coil-DIX1). [Source:UniProtKB/Swiss-Prot;Acc:Q2VUH7]
mouse	chromosome:9:50505629:50505750:-1	Same_strand\|Boundary_non-coding\|ENSMUST00000118707\|ENSMUSG00000032064\|protein_coding\|DIX domain containing 1 Gene [Source:MGI (curated);Acc:Dixdc1-005] ## Same_strand\|Intronic_coding\|ENSMUST00000117646\|ENSMUSG00000032064\|protein_coding\|DIX domain containing 1 Gene [Source:MGI (curated);Acc:Dixdc1-005]