block232223_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block232223_cand 5arm | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block232223_cand 5arm | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block232223 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.010 | no | no | 0.55/0.55 | 22/22/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 8 | 13 | 5arm | 1 | nd | 0.23 | 1 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------UGUGCCA------------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T1S2 | |||
| --------CTGTGCCAATGTCCTGTCACTG---------------------------------------------------------------------- | 22 | 1 | |
| rat | tcacctgaCTGTGCCAATGTCCTGTCACTGcgagcctttctcctcctgggtgtgggagtcttcagttaaacacaggcaagatgtggcagggtcgtggtga | ||
| **************************************************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000001507 ENSRNOG00000001141 RGD1560213_predicted | ||
| rat | ((((((((((.(((((.((.(((((.((((.(((.(((((.((.....))...))))).))))))).....))))))).....))))).))))).))))) | 0.990 -39.60 |
| rat | chromosome:12:41264442:41264541:1 | Same_strand|Intronic_coding|ENSRNOT00000001507|ENSRNOG00000001141 ## ENSRNOG00000001141|protein_coding|RGD1560213_predicted| |
©2008 InteRNA Genomics B.V.