block2584200_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block2584200_cand 5arm | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block2584200_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 |
block2584200 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.45/0.45 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 26 | 2 | 5arm | 1 | nd | 0.25 | 3 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------------------------ACGGUGU------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T3S2 | |||
| --------------------------------CACGGTGTTTTGTGTACTGT------------------------------------------------------------------ | 20 | 1 | |
| rat | GGGCCCGGCTATTTCTTTCTCGTGGC------CACGGTGTTTTGTGTACTGTGTATTCTGTTTTGGCTGAGTACACTTTGCATTGTGCCTACTTCTGAGAGTGTGTGTGGGCTCA--- | ||
| human | --------TTGTGTGTGCATGGTGTCTACACTCACGGTGTTTTGTGTGC----------ATGGTGTCTACATGCACATTGTA-TGTGTATG-----------GTGTCTACACACATGT | ||
| * * * * * *** * *************** * * ** ** * *** *** * **** * **** * * ** | |||
| +++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +++++ | ENSRNOT00000060007 ENSRNOG00000012207 NP_001101678.1 | ||
| +++++++++++++++++++++++++++++++ +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +++++ | ENSRNOT00000017404 ENSRNOG00000012207 NP_001101678.1 | ||
| rat | (((((((..(((..(((((..((((. ((((((((...(((((((..((...........))..)))))))...)))))))).))))....))))).)))..))))))). | 1.000 -41.70 | |
| human | ..(((((((...((..(((((((..(((.......(((((( (((.......)))))))))))). .))))).) )..))..))))))).. | 0.938 -31.91 |
| rat | chromosome:9:32767086:32767194:1 | Same_strand|Boundary_non-coding|ENSRNOT00000016538|ENSRNOG00000012207 ## Same_strand|Intronic_coding|ENSRNOT00000060007|ENSRNOG00000012207 ## ENSRNOG00000012207|protein_coding|NP_001101678.1|dystonin [Source:RefSeq_peptide;Acc:NP_001101678] |
| human | chromosome:13:113149826:113149913:1 | Opposite_strand|Intronic_non-coding|ENST00000356501|ENSG00000153531|protein_coding|[Protein ADP-ribosylarginine] hydrolase-like protein 1 (ADP-ribosylhydrolase 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDY3] ## Opposite_strand|Intronic_coding|ENST00000375418|ENSG00000153531|protein_coding|[Protein ADP-ribosylarginine] hydrolase-like protein 1 (ADP-ribosylhydrolase 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDY3] ## {Repeats: trf 0 class=trf,trf 0 class=trf} |
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