block268769_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block268769_cand 5arm | 1 | 1 | 0 | 1 | 3 | 3 | 2 | 6 | 1 | 3 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block268769_cand 5arm | 0.000 | 0.000 | 0 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
block268769 [novel_lenNOK_cloningOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.003 | no | no | 0.50/0.50 | 18/18/0.00 | 0.0 | 0.0 | 17 | 0 | 9 | 0 | 13 | 18 | 5arm | 1 | nd | 0.06 | 1 | 21 | 9 | na | na |
| Member of family novel59 (seed GAGAUGG): block268769_cand, block1149886_cand |
| reads | miRBase family seed | ||||||||||
| seed | --------------GAGAUGG----------------------------------------------------------------------------------------- | 21 | novel | ||||||||
| len | cloning frequencies | ||||||||||
| T1S1 | T1S2 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| -------------TGAGATGGGATGAGTCCT------------------------------------------------------------------------------- | 18 | 1 | 1 | 1 | 3 | 3 | 2 | 6 | 1 | 3 | |
| rat | CTCAGAGAAGAGGTGAGATGGGATGAGTCCTCCCCAAAGTGTCCAGGCAGACTGAAATGGAGGCTA-TTTTAAGGATTCATTCCCATATTTAGTAACTCACAGCATCTGA | ||||||||||
| mouse | -------------TGAGATGGGATGATCCCCCCCCCAAATGTCCAGGCAGCCTGGAATGGAGGCTATTTTTAAGGATTCATTCCCATATTTA------------------ | ||||||||||
| ************* ** **** ** *********** *** *********** ************************* | |||||||||||
| rat | .(((((......(((((((((((((((((((......(((.((((..((...))...)))).))). .....))))))))).))))).........)))))....))))) | 0.940 -37.70 | |||||||||
| mouse | ....((((((((((((..((.(((....((((((...)))))).))).))..........)))).))).)))))..... | 0.646 -24.20 | |||||||||
| rat | chromosome:13:73612831:73612939:-1 | intergenic |
| mouse | chromosome:1:160248745:160248893:-1 | Same_strand|Intronic_non-coding|ENSMUST00000004133|ENSMUSG00000004031|protein_coding|RIKEN cDNA 6430517E21 gene Gene [Source:MGI Symbol;Acc:MGI:2443333] ## {Repeats: dust 0 class=dust} |
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