miR-Intess: block2749873

block2749873_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.009	no	no	0.40/0.40	20/20/1.00	0.0	0.0	1	0	1	0	28	8	3arm	1	nd	0.30	2	1	1	na	na

		reads	miRBase family seed
seed	-----------------------------------------------------------------------UCUAGUU----------------------------------------	1	novel
		len	cloning frequencies
			T5S1
	----------------------------------------------------------------------CTCTAGTTTCTCTTTCAGGA----------------------------	20	1
rat	TGAGTGGTGCTTAAAATATAAAGTCACAACCTGAATTGAGTCATTGCTGTCTTAGGGAATCCTCTCTTTTCTCTAGTTTCTCTTTCAGGATGGAAAGAATATTTTACAAGCAACATTT
mouse	----------------------------AGCTGAATTGAGTCATTGCTTTCTTAGGGTATCATGCCTTTTCTCTAGTTTCTCTTTCAGGA----------------------------
	* **************** **** * * *************************
	>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>........................................................................................	ENSRNOT00000003782 ENSRNOG00000002824 Rnf12
rat	.(((((.((((((((((((....((.((.((((((..(((.....((((....(((((....)))))......))))..))).)))))).))))....))))))))..)))).)))))	0.960 -30.30
mouse	..(((((..(((.....(((.....(((((.....)))))......)))..))).)))))..	0.999 -13.40

rat	chromosome:X:91969370:91969487:-1	intergenic
mouse	chromosome:X:101157614:101157771:-1	Same_strand\|Exonic_non-coding\|ENSMUST00000121153\|ENSMUSG00000056537\|protein_coding\|ring finger protein 12 Gene [Source:MGI (curated);Acc:Rnf12-001] ## Same_strand\|Boundary_non-coding\|ENSMUST00000070705\|ENSMUSG00000056537\|protein_coding\|ring finger protein 12 Gene [Source:MGI (curated);Acc:Rnf12-001] ## {Repeats: dust 0 class=dust}