block2892074_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block2892074_cand 3arm | 5 | 0.500 | 4.500 | 0.500 | 2 | 2 | 0 | 1 | 0 | 0.500 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block2892074_cand 3arm | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0 | 0.000 | 0 | 0.000 |
block2892074 [novel_lenNOK_cloningOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.004 | no | no | 0.11/0.11 | 18/18/0.00 | 0.0 | 0.0 | 27 | 0 | 8 | 0 | 20 | 9 | 3arm | 2 | nd | 0.28 | 3 | 32 | 8 | na | na |
| reads | miRBase family seed | |||||||||
| seed | -------------------------------------------------------------------------AAAAUAU------------------------------ | 32 | novel | |||||||
| len | cloning frequencies | |||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S2 | T5S2 | |||
| ------------------------------------------------------------------------CAAAATATTTTTTTTTTC-------------------- | 18 | 10 | 1 | 9 | 1 | 4 | 4 | 2 | 1 | |
| rat | gagagacatctgaaaactaaagaagagtagagttgacatattggtctatacctgaatctgataagactagaaCAAAATATTTTTTTTTTCattttagagtaggtctttct | |||||||||
| ************************************************************************************************************** | ||||||||||
| rat | (((((((.(((((((...(((((((((((...(((.....(((((((................)))))))..)))..)))))))))))...)))))))....))))))). | 0.660 -27.09 | ||||||||
| rat | chromosome:X:152242129:152242238:-1 | intergenic ## {Repeats: dust 152242150 152242159 0 class=dust} |
©2008 InteRNA Genomics B.V.