block3060077_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block3060077_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block3060077_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.000 | 0 |
block3060077 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.007 | no | no | 0.55/0.55 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 14 | 11 | 5arm | 1 | nd | 0.15 | 3 | 1 | 1 | na | na |
| Member of family novel13 (seed GGCCUGG): block469284_cand, block3060077_cand, block1576555_cand, block1576558_cand, block1576558_cand, block1576559_cand, block1576559_cand |
| reads | miRBase family seed | ||
| seed | ---------------GGCCUGG--------------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| --------------TGGCCTGGTCCAGTGTTCTT--------------------------------------------------------------------------------- | 20 | 1 | |
| rat | ctaaatgtataaacTGGCCTGGTCCAGTGTTCTTtatgctcatggatttaatagacaccatgattacatatgaatgagaaagcacatggacattgccagactggaagacacttag | ||
| ******************************************************************************************************************* | |||
| rat | ((((.(((.((..(((((...(((((((((((((((((.((((((............))))))...)))).....))))..)))).)))))...)))))..))....))).)))) | 0.910 -32.00 |
| rat | chromosome:X:117785174:117785288:1 | intergenic |
©2008 InteRNA Genomics B.V.