block306442_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block306442_cand 5arm | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block306442_cand 5arm | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block306442 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.35/0.35 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 7 | 29 | 5arm | 1 | nd | 0.25 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | --------UUUGGUU------------------------------------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| T1S1 | |||
| -------TTTTGGTTGGGTTTTGGTTT------------------------------------------------------------------------------------------- | 20 | 1 | |
| rat | ttggtttTTTTGGTTGGGTTTTGGTTTtacgggtgttttgtttttgtttctgttttgtttttgagacagggtctcattctgcaaccctgcttggcccgaaactcactatatagaccag | ||
| ********************************************************************************************************************** | |||
| rat | .((((((...(((.((((((((((((...((((.((..(((...((.(((((((((......)))))))))...))....)))))))))...)))).)))))))))))...)))))). | 0.990 -36.00 |
| rat | chromosome:13:47382623:47382740:1 | intergenic ## {Repeats: dust 47382658 47382678 0 class=dust} |
©2008 InteRNA Genomics B.V.