block3196951_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block3196951_cand 3arm | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block3196951_cand 3arm | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block3196951 [novel_shortStem_mirtron_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.004 | no | no | 0.67/0.67 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 1 | 10 | 3arm | 1 | 0 | 0.19 | 1 | 1 | 1 | na | na |
| Member of family novel140 (seed UGACCUG): block1506205_cand, block3196951_cand |
| reads | miRBase family seed | ||
| seed | ----------------------------------------------------UGACCUG-------------- | 1 | novel |
| len | cloning frequencies | ||
| T1S2 | |||
| ---------------------------------------------------CTGACCTGTCCTGCCCTCCAG- | 21 | 1 | |
| rat | ctgggggtaccttaggaagggcagggaataagtggaaaagcctagtttttcCTGACCTGTCCTGCCCTCCAGg | ||
| ************************************************************************* | |||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>> | ENSRNOT00000008910 ENSRNOG00000037239 Flna_predicted | ||
| rat | ((((((((.....((((.((((((((((.((.(((......))).))))))))).))).)))))))).)))). | 0.870 -32.30 |
| rat | chromosome:X:160373737:160373809:1 | Same_strand|Intronic_coding|ENSRNOT00000008910|ENSRNOG00000037239 ## ENSRNOG00000037239|protein_coding|Flna_predicted| |
©2008 InteRNA Genomics B.V.