block362943_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block362943_cand 3arm | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block362943_cand 3arm | 0 | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 |
block362943 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.002 | no | no | 0.52/0.52 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 11 | 12 | 3arm | 1 | nd | 0.29 | 3 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ------------------------------------------------------------UCCACAG------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T2S2 | |||
| -----------------------------------------------------------CTCCACAGTAGACCTGACTAC----------- | 21 | 1 | |
| rat | CTAAGTCCTTGTAGTGTCTCTCCTGGATTTTCACAC-AGACCCCATCTTGTGCATGAGACTCCACAGTAGACCTGACTACCTTCTGACTTA | ||
| mouse | -TAAGTTCTTCTAGTGTCGTTGTTGAGCTTTCACATGAGACGCCATCTC-TATGTGAAACTCCACAGTAGGCCTGACTAC----------- | ||
| ***** *** ******* * ** ******* **** ****** * *** ************ ********* | |||
| rat | .((((((...(((((((((((..((((.(((((((( ((........)))))..))))).)))).)).))))...))))).....)))))) | 1.000 -23.80 | |
| mouse | ..........(((.(((..(((.(((.((((((((((((.....)))) .))))))))))).)))...))))))..... | 0.989 -22.60 |
| rat | chromosome:14:75418328:75418417:-1 | intergenic |
| mouse | chromosome:5:41092074:41092203:1 | intergenic |
©2008 InteRNA Genomics B.V.