miR-Intess: block41546

block41546_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.002	no	no	0.55/0.58	18/22/0.01	0.0	0.0	419	0	10	0	8	28	3arm	1	nd	0.22	3	589	10	na	na

		reads	miRBase family seed
seed	----------------------------------------------------------------------------------------GGAGAGC------------------	589	novel
		len	cloning frequencies
			T1S1	T1S2	T2S1	T2S2	T3S1	T3S2	T4S1	T4S2	T5S1	T5S2
	---------------------------------------------------------------------------------------TGGAGAGCCCTTACTGGA--------	18	167	98	13	11	46	23	72	82	45	25
	---------------------------------------------------------------------------------------TGGAGAGCCCTTACTGGACAG-----	21	1	-	-	1	-	-	-	-	1	1
	---------------------------------------------------------------------------------------TGGAGAGCCCTTACTGGAC-------	19	1	-	-	-	-	-	-	-	-	1
	---------------------------------------------------------------------------------------TGGAGAGCCCTTACTGGACAGA----	22	-	-	-	-	1	-	-	-	-	-
rat	gggttctggagaccaagggctctgtctaggcatgcaagaggcagccagctgtgagctgagcccacgtaggctggtatagtgcgtctcTGGAGAGCCCTTACTGGAcagagccc
	*****************************************************************************************************************
	+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000019037 ENSRNOG00000014099 Ka15
rat	((((((((....((((((((((..((((((.(((((.....(((((.((.(((.((...)).))))).)))))......))))).)))))))))))))...))).))))))))	0.990 -54.20

rat