miR-Intess: block419476

block419476_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.001	no	no	0.55/0.55	20/20/1.00	0.0	0.0	1	0	1	0	21	2	3arm	1	nd	0.30	2	1	1	na	na

		reads	miRBase family seed
seed	---------------------------------------------GUCAGGU---------------------------------	1	novel
		len	cloning frequencies
			T1S2
	--------------------------------------------AGTCAGGTCCTGCATCCTCA---------------------	20	1
rat	GCAGTTGCTCTGTGCCTTAGAGGAGCAGAGCCTGAATGCACAGCAGTCAGGTCCTGCATCCTCACACGGGCTGGAATCAACAGCA
mouse	------------------AGAGAGGCAAGCCCTGTGGGT----CGGTCAGGTCCTGCCTCCTCA---------------------
	** * **** * * ********** ****
	-----------------------------------------------------------------------------------------------	ENSRNOT00000006151 ENSRNOG00000004606 LOC686117
	-----------------------------------------------------------------------------------------------	ENSRNOT00000006157 ENSRNOG00000004606 LOC686117
rat	((.((((.((((.((((..(((((((((..(((((.(((...))).)))))..)))).)))))....))))))))..)))).)).	0.990 -39.90
mouse	.((((((((...((((..... ....))))...)))))).)).	0.881 -15.80

rat	chromosome:14:99725396:99725480:1	Opposite_strand\|Intronic_coding\|ENSRNOT00000006151\|ENSRNOG00000004606 ## ENSRNOG00000004606\|protein_coding\|LOC686117\|
mouse	chromosome:14:119436672:119436796:1	Opposite_strand\|Intronic_coding\|ENSMUST00000110726\|ENSMUSG00000042104\|protein_coding\|UDP-glucose ceramide glucosyltransferase-like 2 Gene [Source:MGI Symbol;Acc:MGI:1913685] ## Opposite_strand\|Boundary_non-coding\|ENSMUST00000022732\|ENSMUSG00000042104\|protein_coding\|UDP-glucose ceramide glucosyltransferase-like 2 Gene [Source:MGI Symbol;Acc:MGI:1913685]