block429993_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block429993_cand 5arm | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block429993_cand 5arm | 0 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block429993 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.41/0.41 | 22/22/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 28 | 5 | 5arm | 1 | nd | 0.09 | 1 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------ACUGAGG------------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T2S1 | |||
| ----------------------------AACTGAGGGTTGATCATTTCGT---------------------------------------------------------------------- | 22 | 1 | |
| rat | cagaacctatctgatcacactgaggaaaAACTGAGGGTTGATCATTTCGTttattaatgaaactgaccaggaaatgatcaagcctcaggctttcctcagtgtgatggacagatggattct | ||
| ************************************************************************************************************************ | |||
| ---------------------------------------------------------------------------------------------------------------------------------- | ENSRNOT00000046879 ENSRNOG00000032690 LOC683661 | ||
| rat | .((((.((((((((((((((((((((((..((((((.((((((((((((((..((.....))..)))...))))))))))).))))))..)))))))))))))))...))))))).)))) | 0.870 -63.20 |
| rat | chromosome:15:8747887:8748006:-1 | Opposite_strand|Intronic_coding|ENSRNOT00000046879|ENSRNOG00000032690 ## ENSRNOG00000032690|protein_coding|LOC683661|ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) [Source:RefSeq_peptide;Acc:NP_001101841] |
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