block56843_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block56843_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block56843_cand 5arm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.000 | 0 |
block56843 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.010 | no | no | 0.45/0.45 | 20/20/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 14 | 0 | 5arm | 1 | nd | 0.25 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------CUCUGCU------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T5S1 | |||
| --------------ACTCTGCTTTTGTTGGTGTG------------------------------------ | 20 | 1 | |
| rat | tcagtgcatacccaACTCTGCTTTTGTTGGTGTGtattgtagaccaataaacaagtttatttgtgtgctg | ||
| ********************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000050277 ENSRNOG00000025496 Usp7 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000046232 ENSRNOG00000025496 Usp7 | ||
| rat | .(((..((((...((((.((..(((((((((.((.....)).)))))))))))))))....))))..))) | 0.500 -19.60 |
| rat | chromosome:10:6960224:6960293:1 | Same_strand|Intronic_non-coding|ENSRNOT00000050277|ENSRNOG00000025496 ## Same_strand|Intronic_coding|ENSRNOT00000046232|ENSRNOG00000025496 ## ENSRNOG00000025496|protein_coding|Usp7|Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease) (rHAUSP). [Source:UniProtKB/Swiss-Prot;Acc:Q4VSI4] |
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