block61058_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block61058_cand 3arm | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block61058_cand 3arm | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block61058 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.57/0.57 | 23/23/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 7 | 3 | 3arm | 1 | nd | 0.17 | 2 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------------------------------------------UGGUCCC---------------------- | 1 | novel |
| len | cloning frequencies | ||
| T1S2 | |||
| --------------------------------------------------CTGGTCCCTAATGCATCCCCTGT------- | 23 | 1 | |
| rat | TGTATGACATGCGTGGATGCATCAGGGGCCAGGCTGGGCAAAAGAGAGGCCTGGTCCCTAATGCATCCCCTGTAAGGCAG | ||
| mouse | ----------GCGTGGATGCATC--GGGCCAGGCTGGGCAAAAGAGAGGCCTGGTCCCTAATGCATCCTCTG-------- | ||
| ************* ******************************************* *** | |||
| rat | (((...(((.....((((((((.((((((((((((............)))))))))))).))))))))..)))...))). | 0.860 -40.50 | |
| mouse | ....((((((((. ((((((((((............))))))))))...)))))))).... | 1.000 -31.00 |
| rat | chromosome:10:15402857:15402936:1 | intergenic |
| mouse | chromosome:17:26269161:26269280:1 | intergenic |
©2008 InteRNA Genomics B.V.