block692638_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block692638_cand 3arm | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block692638_cand 3arm | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block692638 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.003 | no | no | 0.43/0.43 | 21/21/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 29 | 3 | 3arm | 1 | nd | 0.24 | 3 | 1 | 1 | na | na |
| Member of family novel156 (seed AAGGAGC): block95134_cand, block692638_cand |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------------------AAGGAGC------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| T1S1 | |||
| ----------------------------------------------------------------AAAGGAGCTGAAAACAAGGAG----------------------------- | 21 | 1 | |
| rat | aacatttctttttgtttctgggctaccttgtttctggctcatgttctgtacagggttaggaaggAAAGGAGCTGAAAACAAGGAGcctgctagaatcatgtgtgagaagcatgt | ||
| ****************************************************************************************************************** | |||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | ENSRNOT00000023874 ENSRNOG00000017568 Rit2 | ||
| rat | .(((((((((..((.(((((((((.((((((((..(((((...((((..............))))...)))))..)))))))))))))...)))).)).....)))))..)))) | 0.890 -36.74 |
| rat | chromosome:18:23632911:23633024:-1 | Same_strand|Intronic_coding|ENSRNOT00000023874|ENSRNOG00000017568 ## ENSRNOG00000017568|protein_coding|Rit2|GTP-binding protein Rit2. [Source:UniProtKB/Swiss-Prot;Acc:Q5BJQ5] |
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