miR-Intess: block78714

block78714_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.007	no	no	0.48/0.48	21/21/1.00	0.0	0.0	1	0	1	0	17	2	3arm	1	0	0.24	3	1	1	na	na

		reads	miRBase family seed
seed	---------------------------------------------------CUUACCC------------------------------	1	novel
		len	cloning frequencies
			T1S2
	--------------------------------------------------TCTTACCCTCTCTTTTCCCAG-----------------	21	1
rat	TCCCGTTCCCTTTCCCCTTGAGGGAATTGGGCAGTAAGGGGAACTGACCCTCTTACCCTCTCTTTTCCCAGGGTAACTCAGGTCTGGG
mouse	----------------TTTGACGGAATTAGGCGGTAAGGGGACCTGACCTTCTTACCCTCTTTTTTTC--------CCCA--------
	** ** * ******* ** ******* ** * * **
	++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>	ENSRNOT00000025211 ENSRNOG00000018526 Dlgh4
	++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++>>>>>>>>>>>>>>>>>>>>>>	ENSRNOT00000039956 ENSRNOG00000018526 Dlgh4
rat	.((((..((.....((((...(((((..(((..((((((((.......))))))))...)))..))))))))).......))..))))	0.890 -32.00
mouse	......((((..(((.(((((((((.......))))))))).)))....))) )...	1.000 -16.70

rat	chromosome:10:56876615:56876702:1	Same_strand\|Intronic_coding\|ENSRNOT00000025211\|ENSRNOG00000018526 ## ENSRNOG00000018526\|protein_coding\|Dlgh4\|Disks large homolog 4 (Postsynaptic density protein 95) (PSD-95) (Synapse-associated protein 90) (SAP90). [Source:UniProtKB/Swiss-Prot;Acc:P31016]
mouse	chromosome:11:69844276:69844403:1	Same_strand\|Boundary_coding\|ENSMUST00000108589\|ENSMUSG00000020886\|protein_coding\|discs, large homolog 4 (Drosophila) Gene [Source:MGI (curated);Acc:Dlg4-002]