miR-Intess: block802760

block802760_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.001	no	no	0.43/0.43	21/21/1.00	0.0	0.0	1	0	1	0	16	3	5arm	1	nd	0.14	3	1	1	na	na

		reads	miRBase family seed
seed	-----------------CUCUCAC----------------------------------------------------------------	1	novel
		len	cloning frequencies
			T5S2
	----------------ACTCTCACTGTAGCTTCATGT---------------------------------------------------	21	1
rat	TGTTAAACTCTCGTGTACTCTCACTGTAGCTTCATGTTTTTCTTACCAGAACATGGAGTTAGAATGAGAGTAGATGAATCATTGACAA
mouse	----------------ACTCTCACTGTAGCTTCTCAT-------------ACATGCA---------AGATCAGCTATGTGAGTGT---
	***************** * ***** * * * * * **
	++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++	ENSRNOT00000021711 ENSRNOG00000015843 Cda08
rat	((((((....((((.((((((((...((((((((((((((.......))))))))))))))...)))))))).))))....)))))).	1.000 -34.70
mouse	((.(((((.((((((..((.. ....... .))..))))))))))).))	1.000 -13.60

rat	chromosome:19:22653200:22653287:1	Same_strand\|Intronic_coding\|ENSRNOT00000021711\|ENSRNOG00000015843 ## ENSRNOG00000015843\|protein_coding\|Cda08\|T-cell immunomodulatory protein precursor (Protein TIP) (Integrin- alpha FG-GAP repeat-containing protein 1) (CDA08-like protein). [Source:UniProtKB/Swiss-Prot;Acc:Q8R4E1]
mouse	chromosome:11:42405223:42405350:1	Same_strand\|Intronic_coding\|ENSMUST00000007797\|ENSMUSG00000007653\|protein_coding\|gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 Gene [Source:MGI (curated);Acc:Gabrb2-001]