block97555_cand
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block97555_cand 5arm | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 17 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| block97555_cand 5arm | 0.000 | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0.001 | 0 |
block97555 [novel_cloningOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.554 | no | no | 0.42/0.60 | 20/24/1.00 | 0.0 0.4 0.0 | 0.0 0.6 0.0 | 3 14 1 | 0 0 0 | 2 2 1 | 0 0 0 | 8 18 28 | 15 7 -2 | 5arm 5arm 5arm_loop | 1 1 1 | nd nd nd | 0.29 0.50 0.57 | 3 5 5 | 19 | 3 | na | na |
| Member of family novel23 (seed CUCAGCA): sblock706_novel, block29776_cand, block1317251_cand, block97555_cand |
| reads | miRBase family seed | ||||
| seed | -------------------CUCAGCA-------------------------------------------------------------------------- | 11 | novel | ||
| seed | ---------------------CAGCACA------------------------------------------------------------------------ | 3 | novel | ||
| seed | ---------AAGACAU------------------------------------------------------------------------------------ | 3 | novel | ||
| seed | -----------------------------GUCGCAG---------------------------------------------------------------- | 1 | novel | ||
| seed | ------------------------CACAUGU--------------------------------------------------------------------- | 1 | novel | ||
| len | cloning frequencies | ||||
| T1S1 | T2S1 | T5S1 | |||
| ------------------TCTCAGCACATGTCGCAGTCAG------------------------------------------------------------ | 22 | - | - | 7 | |
| ------------------TCTCAGCACATGTCGCAGTC-------------------------------------------------------------- | 20 | - | - | 4 | |
| --------------------TCAGCACATGTCGCAGTCAG------------------------------------------------------------ | 20 | - | - | 3 | |
| --------TAAGACATCATCTCAGCACATGTC-------------------------------------------------------------------- | 24 | - | 1 | 2 | |
| ----------------------------TGTCGCAGTCAGCCTAAGTTC--------------------------------------------------- | 21 | - | - | 1 | |
| -----------------------GCACATGTCGCAGTCAGCCT--------------------------------------------------------- | 20 | 1 | - | - | |
| rat | ttgcgatataagacatcaTCTCAGCACATGTCGCAGTCAGcctaagttcacttatgaaggcttttccggtgggcctgatggttgtattgtcgtttgcagc | ||||
| **************************************************************************************************** | |||||
| rat | ((((((.((((.((((((((...((.(((..((.....(((((..((......))..)))))....))))).))..)))))).)).))))...)))))). | 0.580 -22.40 | |||
| rat | chromosome:10:92630958:92631057:1 | intergenic |
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