rno-let-7a
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-let-7a 5arm | 17480.500 | 10374 | 6307 | 8129 | 9847 | 9188 | 4788.500 | 8911.500 | 6845.500 | 11869 |
| rno-let-7a 3arm | 734.500 | 485 | 204 | 280 | 284 | 127 | 159.500 | 253.500 | 282.500 | 144 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-let-7a 5arm | 0.581 | 0.453 | 0.342 | 0.482 | 0.480 | 0.696 | 0.372 | 0.469 | 0.451 | 0.790 |
| rno-let-7a 3arm | 0.024 | 0.021 | 0.011 | 0.017 | 0.014 | 0.010 | 0.012 | 0.013 | 0.019 | 0.010 |
sblock11980 (miRBase rno-let-7a-2) [miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-let-7a-2 | 0.001 | no | no | 0.33/0.56 | 18/26/0.77 | 0.0 0.0 0.0 | 0.9 1.5 1.8 | 75276 4 79 | 0 0 0 | 10 4 10 | 0 0 0 | 16 38 13 | 0 -20 2 | 5arm loop 3arm | 4 4 4 | nd nd nd | 0.10 1.00 0.11 | 1 18 1 | 99652 | 10 | 2 | 2 |
| Member of family novel64 (seed UGUACAG): rno-let-7a, block1902676_cand |
| reads | miRBase family seed | |||||||||||
| seed | -----------------------------------GAGGUAG------------------------------------------------------------------------------------------- | 98684 | let-7a/7b/7c/7d/7e/7f/7i/miR-98 | |||||||||
| seed | ------------------------------------AGGUAGU------------------------------------------------------------------------------------------ | 743 | miR-196a/196b/196c | |||||||||
| seed | --------------------------------------------------------------------------------UGUACAG---------------------------------------------- | 118 | novel | |||||||||
| seed | ---------------------------------------UAGUAGG--------------------------------------------------------------------------------------- | 60 | novel | |||||||||
| seed | ----------------------------------UGAGGUA-------------------------------------------------------------------------------------------- | 22 | novel | |||||||||
| seed | -------------------------------------GGUAGUA----------------------------------------------------------------------------------------- | 9 | novel | |||||||||
| seed | -------------------------------------------------------------------------------CUGUACA----------------------------------------------- | 6 | novel | |||||||||
| seed | ---------------------------------------------------------AGAGUUA--------------------------------------------------------------------- | 4 | novel | |||||||||
| seed | --------------------------------------GUAGUAG---------------------------------------------------------------------------------------- | 4 | novel | |||||||||
| seed | ---------------------------------------------------------------------------------GUACAGC--------------------------------------------- | 1 | novel | |||||||||
| seed | ---------------------------------CUGAGGU--------------------------------------------------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| ----------------------------------TGAGGTAGTAGGTTGTATAG------------------------------------------------------------------------------- | 20 | 5335 | 3302 | 1899 | 2450 | 3120 | 2909 | 1620 | 2747 | 1976 | 3465 | |
| rno-let-7a | ----------------------------------TGAGGTAGTAGGTTGTATAGTT----------------------------------------------------------------------------- | 22 | 4122 | 2565 | 1632 | 2030 | 2092 | 2192 | 773 | 2022 | 1798 | 3551 |
| ----------------------------------TGAGGTAGTAGGTTGTATAGT------------------------------------------------------------------------------ | 21 | 4106 | 2352 | 1507 | 1848 | 2459 | 2299 | 1312 | 2165 | 1648 | 2680 | |
| ----------------------------------TGAGGTAGTAGGTTGTAT--------------------------------------------------------------------------------- | 18 | 2887 | 1458 | 666 | 882 | 1136 | 976 | 677 | 1181 | 921 | 1446 | |
| ----------------------------------TGAGGTAGTAGGTTGTATA-------------------------------------------------------------------------------- | 19 | 2005 | 1095 | 659 | 953 | 1281 | 1038 | 535 | 1051 | 736 | 1106 | |
| ----------------------------------TGAGGTAGTAGGTTGTATAGTTT---------------------------------------------------------------------------- | 23 | 240 | 180 | 184 | 288 | 209 | 164 | 152 | 229 | 139 | 194 | |
| -----------------------------------GAGGTAGTAGGTTGTATAG------------------------------------------------------------------------------- | 19 | 46 | 37 | 21 | 32 | 27 | 25 | 23 | 29 | 18 | 34 | |
| -----------------------------------GAGGTAGTAGGTTGTATAGTT----------------------------------------------------------------------------- | 21 | 32 | 14 | 22 | 12 | 21 | 15 | 4 | 16 | 11 | 32 | |
| -----------------------------------GAGGTAGTAGGTTGTATAGT------------------------------------------------------------------------------ | 20 | 23 | 13 | 5 | 9 | 14 | 17 | 11 | 17 | 19 | 27 | |
| -----------------------------------GAGGTAGTAGGTTGTATA-------------------------------------------------------------------------------- | 18 | 28 | 16 | 5 | 11 | 13 | 11 | 2 | 8 | 7 | 5 | |
| --------------------------------------GTAGTAGGTTGTATAGTT----------------------------------------------------------------------------- | 18 | 14 | 4 | 10 | 11 | 5 | 3 | 1 | 4 | 2 | 6 | |
| -------------------------------------------------------------------------------CTGTACAGCCTCCTAGCTTTCC-------------------------------- | 22 | 15 | 17 | 2 | - | - | 1 | 4 | 6 | 2 | - | |
| ----------------------------------TGAGGTAGTAGGTTGTATAGTTTA--------------------------------------------------------------------------- | 24 | 1 | 2 | 5 | 5 | 3 | 3 | 1 | 5 | 7 | 5 | |
| -------------------------------------------------------------------------------CTGTACAGCCTCCTAGCTT----------------------------------- | 19 | 11 | 11 | - | 1 | 1 | - | 3 | 4 | 1 | - | |
| -------------------------------------------------------------------------------CTGTACAGCCTCCTAGCT------------------------------------ | 18 | 9 | 10 | - | - | 3 | - | - | 4 | - | 2 | |
| -----------------------------------GAGGTAGTAGGTTGTATAGTTT---------------------------------------------------------------------------- | 22 | 1 | - | 2 | 2 | - | 1 | 1 | 2 | - | - | |
| -------------------------------------------------------------------------------CTGTACAGCCTCCTAGCTTTC--------------------------------- | 21 | 4 | 1 | - | - | - | - | - | 1 | 1 | 1 | |
| ---------------------------------CTGAGGTAGTAGGTTGTATAG------------------------------------------------------------------------------- | 21 | 2 | 3 | - | 1 | - | - | - | - | - | - | |
| ---------------------------------CTGAGGTAGTAGGTTGTA---------------------------------------------------------------------------------- | 18 | 1 | 1 | - | 3 | - | - | - | - | - | 1 | |
| ------------------------------------AGGTAGTAGGTTGTATAGT------------------------------------------------------------------------------ | 19 | 1 | - | 1 | - | - | 1 | - | - | 1 | 1 | |
| -------------------------------------GGTAGTAGGTTGTATAGTT----------------------------------------------------------------------------- | 19 | 1 | - | 2 | - | - | - | - | - | - | 1 | |
| ---------------------------------CTGAGGTAGTAGGTTGTAT--------------------------------------------------------------------------------- | 19 | 1 | 1 | - | - | 1 | - | - | 1 | - | - | |
| ---------------------------------CTGAGGTAGTAGGTTGTATAGTT----------------------------------------------------------------------------- | 23 | 1 | - | - | - | - | - | - | - | - | 2 | |
| ---------------------------------CTGAGGTAGTAGGTTGTATAGT------------------------------------------------------------------------------ | 22 | 2 | - | 1 | - | - | - | - | - | - | - | |
| ------------------------------------AGGTAGTAGGTTGTATAG------------------------------------------------------------------------------- | 18 | - | - | - | 1 | 1 | 1 | - | - | - | - | |
| --------------------------------------------------------TAGAGTTACAACAAGGGAGA--------------------------------------------------------- | 20 | - | 1 | - | - | 1 | 1 | - | - | - | - | |
| -------------------------------------------------------------------------------CTGTACAGCCTCCTAGCTTTCCT------------------------------- | 23 | 1 | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------------TGAGGTAGTAGGTTGTATAGTTTAGA------------------------------------------------------------------------- | 26 | - | - | - | - | 1 | - | - | 1 | - | - | |
| ------------------------------------------------------------------------------ACTGTACAGCCTCCTAGCTTTCC-------------------------------- | 23 | 2 | - | - | - | - | - | - | - | - | - | |
| -----------------------------------GAGGTAGTAGGTTGTATAGTTTA--------------------------------------------------------------------------- | 23 | - | - | - | - | 1 | - | - | - | - | 1 | |
| ------------------------------------AGGTAGTAGGTTGTATAGTT----------------------------------------------------------------------------- | 20 | - | - | - | - | 1 | - | - | - | - | - | |
| --------------------------------------------------------TAGAGTTACAACAAGGGA----------------------------------------------------------- | 18 | 1 | - | - | - | - | - | - | - | - | - | |
| -------------------------------------------------------------------------------CTGTACAGCCTCCTAGCTTT---------------------------------- | 20 | - | 1 | - | - | - | - | - | - | - | - | |
| ------------------------------------------------------------------------------ACTGTACAGCCTCCTAGCTTTC--------------------------------- | 22 | - | - | - | - | - | - | - | 1 | - | - | |
| --------------------------------------------------------------------------------TGTACAGCCTCCTAGCTTTCCT------------------------------- | 22 | - | - | - | - | - | - | - | - | - | 1 | |
| ------------------------------------------------------------------------------ACTGTACAGCCTCCTAGCT------------------------------------ | 19 | - | - | - | - | - | - | - | 1 | - | - | |
| ------------------------------------------------------------------------------ACTGTACAGCCTCCTAGC------------------------------------- | 18 | - | - | - | - | - | 1 | - | - | - | - | |
| ------------------------------------------------------------------------------ACTGTACAGCCTCCTAGCTT----------------------------------- | 20 | - | 1 | - | - | - | - | - | - | - | - | |
| --------------------------------GCTGAGGTAGTAGGTTGTATAG------------------------------------------------------------------------------- | 22 | - | - | - | - | 1 | - | - | - | - | - | |
| ----------------------------------TGAGGTAGTAGGTTGTATAGTTTAG-------------------------------------------------------------------------- | 25 | - | - | - | 1 | - | - | - | - | - | - | |
| rat | ------------------CGGCATGCTCCCAGGCTGAGGTAGTAGGTTGTATAGTTTAGAGTTACAACAAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTTGCAC------------------- | |||||||||||
| human | GTTTTCCAGCCATTGTGACTGCATGCTCCCAGGTTGAGGTAGTAGGTTGTATAGTTTAGAATTACATCAAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGTCTTGCACTAAACAACATGGTGAGAAC | |||||||||||
| mouse | --------GCCATTGTGACTGCATGTTCCCAGGTTGAGGTAGTAGGTTGTATAGTTTAGAGTTACATCAAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTTGCACAAAGCAACATGGC------ | |||||||||||
| * ***** ******* ************************** ***** *************************************** ******* | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053671 ENSRNOG00000035548 rno-let-7a-2 | |||||||||||
| rat | ..(((.(.(((((((..(((.(((.(((((((((((((.....................))))))))))))).))).)))..)))))))).))).. | 1.000 -39.20 | ||||||||||
| human | ((((((..((((((((...((((....((((((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).)))..))))))...))))....)))..))))))))))) | 0.998 -49.80 | ||||||||||
| mouse | ((((((((...((((.((.((((((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).)))..)))))))).))))....)))..))))) | 0.998 -48.60 | ||||||||||
| rat | chromosome:8:44525769:44525864:1 | Same_strand|Exonic_non-coding|ENSRNOT00000053671|ENSRNOG00000035548 ## Same_strand|Boundary_non-coding|ENSRNOT00000053671|ENSRNOG00000035548 ## ENSRNOG00000035548|miRNA|rno-let-7a-2|rno-let-7a-2 [Source:miRBase;Acc:MI0000828] ## {MIR: rno-let-7a-2} |
| human | chromosome:11:121522409:121522541:-1 | Same_strand|Boundary_non-coding|ENST00000362105|ENSG00000198975|miRNA|hsa-let-7a-2 [Source:miRBase;Acc:MI0000061] ## {MIR: hsa-let-7a-2} |
| mouse | chromosome:9:41344789:41344907:1 | Same_strand|Boundary_non-coding|ENSMUST00000083680|ENSMUSG00000065614|miRNA|mmu-let-7a-2 [Source:miRBase;Acc:MI0000557] ## {MIR: mmu-let-7a-2} |
sblock5322 (miRBase rno-let-7a-1) [miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-let-7a-1 | 0.001 | no | no | 0.28/0.60 | 18/26/0.76 | 0.0 0.1 0.0 0.0 0.0 0.0 | 0.9 3.7 0.0 0.0 0.7 0.2 | 75276 28 1 1 2513 5 | 0 0 0 0 0 0 | 10 8 1 1 10 3 | 0 0 0 0 0 0 | 12 34 45 32 21 0 | 6 -20 -15 -2 8 29 | 5arm 5arm_loop_3arm 3arm_loop 3arm_loop 3arm 3arm | 4 4 4 4 4 4 | nd nd nd nd nd nd | 0.10 0.55 0.62 0.24 0.09 0.67 | 2 5 4 4 2 13 | 105441 | 10 | 2 | 2 |
| Located in cluster 33: rno-let-7a, rno-let-7f |
| Member of family let-7b* (seed UAUACAA): rno-let-7a, rno-let-7f, rno-let-7c, rno-let-7b, rno-let-7f-1 |
| reads | miRBase family seed | |||||||||||
| seed | -------------GAGGUAG-------------------------------------------------------------------------------------- | 98935 | let-7a/7b/7c/7d/7e/7f/7i/miR-98 | |||||||||
| seed | ----------------------------------------------------------------UAUACAA----------------------------------- | 5627 | let-7b* | |||||||||
| seed | --------------AGGUAGU------------------------------------------------------------------------------------- | 742 | miR-196a/196b/196c | |||||||||
| seed | -----------------UAGUAGG---------------------------------------------------------------------------------- | 61 | novel | |||||||||
| seed | -----------------------------------UAGGGUC---------------------------------------------------------------- | 26 | novel | |||||||||
| seed | ------------UGAGGUA--------------------------------------------------------------------------------------- | 11 | novel | |||||||||
| seed | ------------------------------------------------------------------UACAAUC--------------------------------- | 10 | novel | |||||||||
| seed | ---------------GGUAGUA------------------------------------------------------------------------------------ | 9 | novel | |||||||||
| seed | -----------------------------------------------------------------AUACAAU---------------------------------- | 5 | novel | |||||||||
| seed | -------------------------------------------------------------------------------------UAAGGUG-------------- | 5 | novel | |||||||||
| seed | ----------------GUAGUAG----------------------------------------------------------------------------------- | 4 | novel | |||||||||
| seed | ------------------------------------AGGGUCA--------------------------------------------------------------- | 2 | novel | |||||||||
| seed | --------------------------------------------------------------ACUAUAC------------------------------------- | 1 | novel | |||||||||
| seed | ---------------------------------------------------------------CUAUACA------------------------------------ | 1 | novel | |||||||||
| seed | -----------------------------------------CACACCC---------------------------------------------------------- | 1 | novel | |||||||||
| seed | ------------------------------------------------------GGGAGAU--------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| ------------TGAGGTAGTAGGTTGTATAG-------------------------------------------------------------------------- | 20 | 5335 | 3302 | 1899 | 2450 | 3120 | 2909 | 1620 | 2747 | 1976 | 3465 | |
| rno-let-7a | ------------TGAGGTAGTAGGTTGTATAGTT------------------------------------------------------------------------ | 22 | 4122 | 2565 | 1632 | 2030 | 2092 | 2192 | 773 | 2022 | 1798 | 3551 |
| ------------TGAGGTAGTAGGTTGTATAGT------------------------------------------------------------------------- | 21 | 4106 | 2352 | 1507 | 1848 | 2459 | 2299 | 1312 | 2165 | 1648 | 2680 | |
| ------------TGAGGTAGTAGGTTGTAT---------------------------------------------------------------------------- | 18 | 2887 | 1458 | 666 | 882 | 1136 | 976 | 677 | 1181 | 921 | 1446 | |
| ------------TGAGGTAGTAGGTTGTATA--------------------------------------------------------------------------- | 19 | 2005 | 1095 | 659 | 953 | 1281 | 1038 | 535 | 1051 | 736 | 1106 | |
| ---------------------------------------------------------------CTATACAATCTACTGTCTTTCC--------------------- | 22 | 625 | 432 | 135 | 142 | 168 | 64 | 85 | 143 | 285 | 95 | |
| ------------TGAGGTAGTAGGTTGTATAGTTT----------------------------------------------------------------------- | 23 | 240 | 180 | 184 | 288 | 209 | 164 | 152 | 229 | 139 | 194 | |
| ---------------------------------------------------------------CTATACAATCTACTGTCTTTC---------------------- | 21 | 353 | 177 | 156 | 232 | 202 | 79 | 116 | 191 | 116 | 69 | |
| ---------------------------------------------------------------CTATACAATCTACTGTCT------------------------- | 18 | 193 | 135 | 63 | 99 | 90 | 50 | 46 | 60 | 83 | 62 | |
| ---------------------------------------------------------------CTATACAATCTACTGTCTT------------------------ | 19 | 185 | 123 | 45 | 79 | 80 | 41 | 54 | 73 | 58 | 47 | |
| -------------GAGGTAGTAGGTTGTATAG-------------------------------------------------------------------------- | 19 | 46 | 37 | 21 | 32 | 27 | 25 | 23 | 29 | 18 | 34 | |
| ------------TGAGGTAGTAGGTTGTATAGTTTT---------------------------------------------------------------------- | 24 | 64 | 50 | 16 | 27 | 25 | 19 | 13 | 24 | 22 | 31 | |
| -------------GAGGTAGTAGGTTGTATAGTT------------------------------------------------------------------------ | 21 | 32 | 14 | 22 | 12 | 21 | 15 | 4 | 16 | 11 | 32 | |
| -------------GAGGTAGTAGGTTGTATAGT------------------------------------------------------------------------- | 20 | 23 | 13 | 5 | 9 | 14 | 17 | 11 | 17 | 19 | 27 | |
| -------------GAGGTAGTAGGTTGTATA--------------------------------------------------------------------------- | 18 | 28 | 16 | 5 | 11 | 13 | 11 | 2 | 8 | 7 | 5 | |
| ---------------------------------------------------------------CTATACAATCTACTGTCTTT----------------------- | 20 | 19 | 7 | 2 | 3 | 9 | 12 | 3 | 3 | 7 | 3 | |
| ----------------GTAGTAGGTTGTATAGTT------------------------------------------------------------------------ | 18 | 14 | 4 | 10 | 11 | 5 | 3 | 1 | 4 | 2 | 6 | |
| ---------------------------------------------------------------CTATACAATCTACTGTCTTTCCT-------------------- | 23 | 6 | 7 | - | 3 | 3 | 3 | - | 1 | 3 | 2 | |
| -----------------------------------------------------------------ATACAATCTACTGTCTTTCC--------------------- | 20 | 2 | - | 3 | - | 3 | 1 | - | - | 1 | - | |
| -------------GAGGTAGTAGGTTGTATAGTTT----------------------------------------------------------------------- | 22 | 1 | - | 2 | 2 | - | 1 | 1 | 2 | - | - | |
| ----------------------------------TTAGGGTCACACCCACCACTG--------------------------------------------------- | 21 | 2 | 2 | - | - | 1 | - | - | - | - | - | |
| --------------AGGTAGTAGGTTGTATAGT------------------------------------------------------------------------- | 19 | 1 | - | 1 | - | - | 1 | - | - | 1 | 1 | |
| ----------------------------------TTAGGGTCACACCCACCAC----------------------------------------------------- | 19 | 1 | 2 | - | 1 | - | - | - | - | - | - | |
| ------------------------------------------------------------------------------------CTAAGGTGATGGAAAAGTCTG- | 21 | - | - | - | - | 2 | - | - | - | 2 | - | |
| ---------------GGTAGTAGGTTGTATAGTT------------------------------------------------------------------------ | 19 | 1 | - | 2 | - | - | - | - | - | - | 1 | |
| ----------------------------------TTAGGGTCACACCCACCACT---------------------------------------------------- | 20 | 1 | - | - | - | - | 2 | - | - | 1 | - | |
| ----------------------------------TTAGGGTCACACCCACCACTGGGAGA---------------------------------------------- | 26 | - | - | 2 | - | 1 | - | - | - | - | 1 | |
| ----------------------------------TTAGGGTCACACCCACCACTGGGAG----------------------------------------------- | 25 | - | - | - | 1 | 1 | - | - | - | - | 1 | |
| -----------ATGAGGTAGTAGGTTGTATAG-------------------------------------------------------------------------- | 21 | - | 1 | - | 2 | - | - | - | - | - | - | |
| --------------AGGTAGTAGGTTGTATAG-------------------------------------------------------------------------- | 18 | - | - | - | 1 | 1 | 1 | - | - | - | - | |
| ----------------------------------------------------------------TATACAATCTACTGTCTTTCC--------------------- | 21 | 1 | 1 | - | - | - | - | 1 | - | - | - | |
| -----------ATGAGGTAGTAGGTTGTATA--------------------------------------------------------------------------- | 20 | - | 2 | - | - | - | - | 1 | - | - | - | |
| ----------------------------------TTAGGGTCACACCCACCACTGG-------------------------------------------------- | 22 | 2 | - | - | - | 1 | - | - | - | - | - | |
| -----------ATGAGGTAGTAGGTTGTAT---------------------------------------------------------------------------- | 19 | - | 1 | - | - | - | - | - | - | - | 1 | |
| ----------------------------------TTAGGGTCACACCCACCA------------------------------------------------------ | 18 | 2 | - | - | - | - | - | - | - | - | - | |
| -----------------------------------TAGGGTCACACCCACCACTG--------------------------------------------------- | 20 | 2 | - | - | - | - | - | - | - | - | - | |
| -----------ATGAGGTAGTAGGTTGTA----------------------------------------------------------------------------- | 18 | - | 1 | 1 | - | - | - | - | - | - | - | |
| ----------------------------------------TCACACCCACCACTGGGAGAT--------------------------------------------- | 21 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------------------------------------------TATACAATCTACTGTCTTTC---------------------- | 20 | - | - | - | - | 1 | - | - | - | - | - | |
| -----------------------------------------------------TGGGAGATAACTATACAATCT-------------------------------- | 21 | - | 1 | - | - | - | - | - | - | - | - | |
| ----------------------------------------------------------------TATACAATCTACTGTCTT------------------------ | 18 | - | - | - | - | - | - | - | 1 | - | - | |
| ----------------GTAGTAGGTTGTATAGTTTTAGG------------------------------------------------------------------- | 23 | - | - | - | - | - | - | - | - | - | 1 | |
| -----------ATGAGGTAGTAGGTTGTATAGT------------------------------------------------------------------------- | 22 | 1 | - | - | - | - | - | - | - | - | - | |
| ----------------------------------TTAGGGTCACACCCACCACTGGGA------------------------------------------------ | 24 | - | 1 | - | - | - | - | - | - | - | - | |
| --------------------------------------------------------------ACTATACAATCTACTGTCTTTCC--------------------- | 23 | 1 | - | - | - | - | - | - | - | - | - | |
| ------------------------------------------------------------------------------------CTAAGGTGATGGAAAAGTCTGC | 22 | - | - | - | - | - | - | - | - | - | 1 | |
| --------------AGGTAGTAGGTTGTATAGTT------------------------------------------------------------------------ | 20 | - | - | - | - | 1 | - | - | - | - | - | |
| -------------------------------------------------------------AACTATACAATCTACTGTCT------------------------- | 20 | - | - | - | - | - | - | - | 1 | - | - | |
| -------------GAGGTAGTAGGTTGTATAGTTTT---------------------------------------------------------------------- | 23 | - | - | - | - | - | - | 1 | - | - | - | |
| rat | TTCACTGTGGGATGAGGTAGTAGGTTGTATAGTTTTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGATGGAAAAGTCTGC | |||||||||||
| human | ------------TGAGGTAGTAGGTTGTATAGTTTTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTT----------------------- | |||||||||||
| mouse | ------------TGAGGTAGTAGGTTGTATAGTTTTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTT----------------------- | |||||||||||
| *********************************************************************** | ||||||||||||
| .....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>................. | ENSRNOT00000053755 ENSRNOG00000035632 rno-let-7a-1 | |||||||||||
| rat | .(((((.(((((.(((..((((((((((((((((...(((.....))).((....))....))))))))))))))))..)))))))).)))))............. | 1.000 -43.50 | ||||||||||
| human | .(((..((((((((((((((((.....(((...((((....)))).)))))))))))))))))))..))). | 0.201 -29.50 | ||||||||||
| mouse | .(((..((((((((((((((((.....(((...((((....)))).)))))))))))))))))))..))). | 0.201 -29.50 | ||||||||||
| rat | chromosome:17:22119767:22119872:1 | Same_strand|Boundary_non-coding|ENSRNOT00000053755|ENSRNOG00000035632 ## Same_strand|Exonic_non-coding|ENSRNOT00000053755|ENSRNOG00000035632 ## ENSRNOG00000035632|miRNA|rno-let-7a-1|rno-let-7a-1 [Source:miRBase;Acc:MI0000827] ## {MIR: rno-let-7a-1} |
| human | chromosome:9:95978033:95978178:1 | Same_strand|Boundary_non-coding|ENST00000362295|ENSG00000199165|miRNA|hsa-let-7a-1 [Source:miRBase;Acc:MI0000060] ## {MIR: hsa-let-7a-1} |
| mouse | chromosome:13:48633516:48633661:-1 | Same_strand|Boundary_non-coding|ENSMUST00000083487|ENSMUSG00000065421|miRNA|mmu-let-7a-1 [Source:miRBase;Acc:MI0000556] ## {MIR: mmu-let-7a-1} |
©2008 InteRNA Genomics B.V.