rno-let-7c
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-let-7c 5arm | 14697.500 | 8587 | 2123.500 | 2460 | 3469 | 3540 | 2345.500 | 4665.500 | 5606.500 | 11889.500 |
| rno-let-7c 3arm | 768.500 | 496 | 215 | 299 | 298 | 134 | 155.500 | 245.500 | 297.500 | 156 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-let-7c 5arm | 0.489 | 0.375 | 0.115 | 0.146 | 0.169 | 0.268 | 0.182 | 0.246 | 0.370 | 0.791 |
| rno-let-7c 3arm | 0.026 | 0.022 | 0.012 | 0.018 | 0.015 | 0.010 | 0.012 | 0.013 | 0.020 | 0.010 |
sblock11469 (miRBase rno-let-7c-2) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-let-7c-2 | 0.001 | no | no | 0.28/0.70 | 18/26/0.57 | 0.0 0.0 0.0 0.0 | 1.4 0.0 0.0 0.7 | 31456 1 1 2513 | 0 0 0 0 | 10 1 1 10 | 0 0 0 0 | 13 35 21 12 | 6 -14 2 7 | 5arm 5arm_loop_3arm 3arm 3arm | 4 4 4 4 | nd nd nd nd | 0.10 0.35 0.11 0.11 | 2 3 2 2 | 71033 | 10 | 2 | 2 |
| Located in cluster 79: rno-let-7c, rno-let-7b |
| Member of family let-7b* (seed UAUACAA): rno-let-7a, rno-let-7f, rno-let-7c, rno-let-7b, rno-let-7f-1 |
| reads | miRBase family seed | |||||||||||
| seed | ---------------------------------GAGGUAG----------------------------------------------------------------------------------------------- | 64584 | let-7a/7b/7c/7d/7e/7f/7i/miR-98 | |||||||||
| seed | ----------------------------------------------------------------------------------------UAUACAA---------------------------------------- | 5632 | let-7b* | |||||||||
| seed | ----------------------------------AGGUAGU---------------------------------------------------------------------------------------------- | 759 | miR-196a/196b/196c | |||||||||
| seed | -----------------------------------GGUAGUA--------------------------------------------------------------------------------------------- | 14 | novel | |||||||||
| seed | --------------------------------UGAGGUA------------------------------------------------------------------------------------------------ | 12 | novel | |||||||||
| seed | ------------------------------------------------------------------------------------------UACAAUC-------------------------------------- | 10 | novel | |||||||||
| seed | -------------------------------------UAGUAGG------------------------------------------------------------------------------------------- | 7 | novel | |||||||||
| seed | -----------------------------------------------------------------------------------------AUACAAU--------------------------------------- | 5 | novel | |||||||||
| seed | ------------------------------------GUAGUAG-------------------------------------------------------------------------------------------- | 4 | novel | |||||||||
| seed | ---------------------------------------------------------------------------------------CUAUACA----------------------------------------- | 1 | novel | |||||||||
| seed | -----------------------------------------------------------------------------------GUAACUA--------------------------------------------- | 1 | novel | |||||||||
| seed | -------------------------------------------------------UGGG-------CUC------------------------------------------------------------------ | 1 | novel | |||||||||
| seed | --------------------------------------------------------------------------------------ACUAUAC------------------------------------------ | 1 | novel | |||||||||
| seed | ------------------------------GGUGAGG-------------------------------------------------------------------------------------------------- | 1 | novel | |||||||||
| seed | -----------------------------GGGUGAG--------------------------------------------------------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| rno-let-7c | --------------------------------TGAGGTAGTAGGTTGTATGGTT--------------------------------------------------------------------------------- | 22 | 4870 | 3268 | 737 | 732 | 1055 | 1344 | 714 | 1512 | 2382 | 5115 |
| --------------------------------TGAGGTAGTAGGTTGTATG------------------------------------------------------------------------------------ | 19 | 4131 | 2204 | 575 | 715 | 1104 | 919 | 677 | 1386 | 1409 | 2841 | |
| --------------------------------TGAGGTAGTAGGTTGTAT------------------------------------------------------------------------------------- | 18 | 2887 | 1458 | 666 | 882 | 1136 | 976 | 677 | 1181 | 921 | 1446 | |
| --------------------------------TGAGGTAGTAGGTTGTATGG----------------------------------------------------------------------------------- | 20 | 1922 | 1033 | 197 | 277 | 329 | 336 | 258 | 540 | 487 | 1263 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGT---------------------------------------------------------------------------------- | 21 | 1836 | 1026 | 184 | 160 | 289 | 294 | 256 | 433 | 576 | 1346 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCTTTCC-------------------------- | 22 | 625 | 432 | 135 | 142 | 168 | 64 | 85 | 143 | 285 | 95 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCTTTC--------------------------- | 21 | 353 | 177 | 156 | 232 | 202 | 79 | 116 | 191 | 116 | 69 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGTTT-------------------------------------------------------------------------------- | 23 | 246 | 182 | 39 | 87 | 62 | 100 | 59 | 116 | 206 | 335 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCT------------------------------ | 18 | 193 | 135 | 63 | 99 | 90 | 50 | 46 | 60 | 83 | 62 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCTT----------------------------- | 19 | 185 | 123 | 45 | 79 | 80 | 41 | 54 | 73 | 58 | 47 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTT--------------------------------------------------------------------------------- | 21 | 41 | 33 | 5 | 7 | 4 | 17 | 11 | 13 | 25 | 89 | |
| ---------------------------------GAGGTAGTAGGTTGTATG------------------------------------------------------------------------------------ | 18 | 33 | 22 | 14 | 14 | 11 | 13 | 4 | 17 | 15 | 38 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGT---------------------------------------------------------------------------------- | 20 | 45 | 20 | 4 | 5 | 16 | 11 | 8 | 13 | 9 | 36 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGTTTT------------------------------------------------------------------------------- | 24 | 34 | 23 | 13 | 11 | 10 | 4 | 8 | 15 | 14 | 31 | |
| ---------------------------------GAGGTAGTAGGTTGTATGG----------------------------------------------------------------------------------- | 19 | 39 | 18 | 7 | 3 | 8 | 6 | 6 | 14 | 8 | 32 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCTTT---------------------------- | 20 | 19 | 7 | 2 | 3 | 9 | 12 | 3 | 3 | 7 | 3 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCTTTCCT------------------------- | 23 | 6 | 7 | - | 3 | 3 | 3 | - | 1 | 3 | 2 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGTTTTG------------------------------------------------------------------------------ | 25 | 4 | - | 1 | 1 | 2 | - | - | - | 4 | 11 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTTT-------------------------------------------------------------------------------- | 22 | 1 | 3 | 1 | 1 | - | 1 | 1 | 4 | 1 | 6 | |
| -----------------------------------------------------------------------------------------ATACAATCTACTGTCTTTCC-------------------------- | 20 | 2 | - | 3 | - | 3 | 1 | - | - | 1 | - | |
| ----------------------------------AGGTAGTAGGTTGTATGGT---------------------------------------------------------------------------------- | 19 | 2 | 1 | 1 | - | 2 | - | - | 1 | - | 1 | |
| -------------------------------GTGAGGTAGTAGGTTGTAT------------------------------------------------------------------------------------- | 19 | - | 1 | 2 | - | - | - | - | 1 | - | 2 | |
| ----------------------------------AGGTAGTAGGTTGTATGGTT--------------------------------------------------------------------------------- | 20 | 2 | 1 | - | - | - | - | - | 1 | - | 1 | |
| ---------------------------------------------------------------------------------------CTATACAATCTACTGTCTTTCCTG------------------------ | 24 | - | - | - | - | - | 2 | - | - | 1 | 2 | |
| ------------------------------------GTAGTAGGTTGTATGGTT--------------------------------------------------------------------------------- | 18 | - | 3 | 1 | - | 1 | - | - | - | - | - | |
| -----------------------------------GGTAGTAGGTTGTATGGT---------------------------------------------------------------------------------- | 18 | - | 1 | - | - | 1 | - | - | 1 | - | 1 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTTTT------------------------------------------------------------------------------- | 23 | - | - | - | - | - | - | 1 | - | - | 3 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGTTTTGG----------------------------------------------------------------------------- | 26 | 1 | - | - | - | - | - | - | - | - | 3 | |
| ----------------------------------------------------------------------------------------TATACAATCTACTGTCTTTCC-------------------------- | 21 | 1 | 1 | - | - | - | - | 1 | - | - | - | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTTTTG------------------------------------------------------------------------------ | 24 | - | - | - | - | 1 | - | - | - | - | 1 | |
| -------------------------------GTGAGGTAGTAGGTTGTA-------------------------------------------------------------------------------------- | 18 | - | - | - | - | - | - | - | - | 1 | 1 | |
| ------------------------------------GTAGTAGGTTGTATGGTTT-------------------------------------------------------------------------------- | 19 | - | - | 1 | - | - | - | - | 1 | - | - | |
| -------------------------------GTGAGGTAGTAGGTTGTATGGTT--------------------------------------------------------------------------------- | 23 | 1 | - | - | - | - | - | - | - | - | 1 | |
| ----------------------------------------------------------------------------------------TATACAATCTACTGTCTTTC--------------------------- | 20 | - | - | - | - | 1 | - | - | - | - | - | |
| ----------------------------GGGGTGAGGTAGTAGGTTGT--------------------------------------------------------------------------------------- | 20 | - | - | - | - | - | - | - | - | - | 1 | |
| -------------------------------------------------------------------------------------AACTATACAATCTACTGTCT------------------------------ | 20 | - | - | - | - | - | - | - | 1 | - | - | |
| -----------------------------GGGTGAGGTAGTAGGTTGT--------------------------------------------------------------------------------------- | 19 | - | - | 1 | - | - | - | - | - | - | - | |
| ------------------------------------------------------TTGGG-------CTCTGCCCCGCTCTG------------------------------------------------------ | 20 | - | - | - | - | - | - | 1 | - | - | - | |
| -------------------------------GTGAGGTAGTAGGTTGTATGGT---------------------------------------------------------------------------------- | 22 | - | - | - | - | - | - | - | - | 1 | - | |
| -------------------------------GTGAGGTAGTAGGTTGTATGG----------------------------------------------------------------------------------- | 21 | - | - | - | - | - | - | - | - | - | 1 | |
| ----------------------------------AGGTAGTAGGTTGTATGG----------------------------------------------------------------------------------- | 18 | - | - | - | - | 1 | - | - | - | - | - | |
| ----------------------------------------------------------------------------------GGTAACTATACAATCTAC----------------------------------- | 18 | - | - | - | - | - | - | - | - | - | 1 | |
| ----------------------------------------------------------------------------------------TATACAATCTACTGTCTT----------------------------- | 18 | - | - | - | - | - | - | - | 1 | - | - | |
| --------------------------------------------------------------------------------------ACTATACAATCTACTGTCTTTCC-------------------------- | 23 | 1 | - | - | - | - | - | - | - | - | - | |
| rat | -------------------ACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTTTTGGG-------CTCTGCCCCGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGCCGC-------------- | |||||||||||
| human | CCATCGGCACCAAGACCGACTGCCCTTTGGGGTGAGGTAGTAGGTTGTATAGTTTGGGG-------CTCTGCCCTGCTATGGGATAACTATACAATCTACTGTCTTTCCTGAAGTGGCTGTAATATCTGCGGTGG | |||||||||||
| mouse | --------------------------------TGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCTCCG-AAGATAACTATACAACCTACTGCCTTC---------------------------- | |||||||||||
| **************** * **** ** ***** * * *********** ****** *** | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053584 ENSRNOG00000035461 rno-let-7c-2 | |||||||||||
| rat | .((((((((.(((.(((..((((((((((((((((..((( (...))))(((...)))..))))))))))))))))..))).))).))).))))). | 1.000 -48.70 | ||||||||||
| human | .......((((.(((...((.((((((..(((.(((..((((((((((((((((((((( (...)))))).........))))))))))))))))..))))))..))).))).))....)))..)))). | 0.900 -55.80 | ||||||||||
| mouse | .(((((((((((((((((((((((.((((((.....))))))....) ))....)))))))))))))))))))). | 0.866 -39.00 | ||||||||||
| rat | chromosome:7:123700790:123700884:1 | Same_strand|Exonic_non-coding|ENSRNOT00000053584|ENSRNOG00000035461 ## ENSRNOG00000035461|miRNA|rno-let-7c-2|rno-let-7c-2 [Source:miRBase;Acc:MI0000831] ## {MIR: rno-let-7c-2} |
| human | chromosome:22:44887264:44887391:1 | Same_strand|Boundary_non-coding|ENST00000362116|ENSG00000198986|miRNA|hsa-let-7a-3 [Source:miRBase;Acc:MI0000062] ## {MIR: hsa-let-7a-3} |
| mouse | chromosome:15:85537722:85537856:1 | Same_strand|Boundary_non-coding|ENSMUST00000083630|ENSMUSG00000065564|miRNA|mmu-let-7b [Source:miRBase;Acc:MI0000558] ## {MIR: mmu-let-7b} |
sblock3072 (miRBase rno-let-7c-1) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-let-7c-1 | 0.001 | no | no | 0.37/0.53 | 18/24/0.56 | 0.0 0.0 0.0 | 1.4 2.3 0.5 | 31456 30 102 | 0 0 0 | 10 8 10 | 0 0 0 | 15 37 12 | 9 -15 9 | 5arm 5arm_loop_3arm 3arm | 4 4 4 | nd nd nd | 0.10 0.50 0.11 | 1 5 1 | 65526 | 10 | 2 | 2 |
| Located in cluster 15: rno-mir-99a, rno-let-7c |
| Member of family novel221 (seed UGUACAA): rno-let-7c, block1575908_cand |
| reads | miRBase family seed | |||||||||||
| seed | ---------------------------------GAGGUAG------------------------------------------------------------------------------------------ | 64412 | let-7a/7b/7c/7d/7e/7f/7i/miR-98 | |||||||||
| seed | ----------------------------------AGGUAGU----------------------------------------------------------------------------------------- | 754 | miR-196a/196b/196c | |||||||||
| seed | ------------------------------------------------------------------------------UGUACAA--------------------------------------------- | 233 | novel | |||||||||
| seed | --------------------------------UGAGGUA------------------------------------------------------------------------------------------- | 60 | novel | |||||||||
| seed | -------------------------------------------------------AGAGUUA-------------------------------------------------------------------- | 30 | novel | |||||||||
| seed | -----------------------------------GGUAGUA---------------------------------------------------------------------------------------- | 14 | novel | |||||||||
| seed | -------------------------------------UAGUAGG-------------------------------------------------------------------------------------- | 7 | novel | |||||||||
| seed | ------------------------------------GUAGUAG--------------------------------------------------------------------------------------- | 6 | novel | |||||||||
| seed | -------------------------------------------------------------------------------GUACAAC-------------------------------------------- | 3 | novel | |||||||||
| seed | -----------------------------GGUUGAG---------------------------------------------------------------------------------------------- | 2 | novel | |||||||||
| seed | -------------------------------UUGAGGU-------------------------------------------------------------------------------------------- | 2 | novel | |||||||||
| seed | ------------------------------GUUGAGG--------------------------------------------------------------------------------------------- | 2 | novel | |||||||||
| seed | ------------------------------------------------------------------------GUUAACU--------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| rno-let-7c | --------------------------------TGAGGTAGTAGGTTGTATGGTT---------------------------------------------------------------------------- | 22 | 4870 | 3268 | 737 | 732 | 1055 | 1344 | 714 | 1512 | 2382 | 5115 |
| --------------------------------TGAGGTAGTAGGTTGTATG------------------------------------------------------------------------------- | 19 | 4131 | 2204 | 575 | 715 | 1104 | 919 | 677 | 1386 | 1409 | 2841 | |
| --------------------------------TGAGGTAGTAGGTTGTAT-------------------------------------------------------------------------------- | 18 | 2887 | 1458 | 666 | 882 | 1136 | 976 | 677 | 1181 | 921 | 1446 | |
| --------------------------------TGAGGTAGTAGGTTGTATGG------------------------------------------------------------------------------ | 20 | 1922 | 1033 | 197 | 277 | 329 | 336 | 258 | 540 | 487 | 1263 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGT----------------------------------------------------------------------------- | 21 | 1836 | 1026 | 184 | 160 | 289 | 294 | 256 | 433 | 576 | 1346 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGTTT--------------------------------------------------------------------------- | 23 | 246 | 182 | 39 | 87 | 62 | 100 | 59 | 116 | 206 | 335 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTT---------------------------------------------------------------------------- | 21 | 41 | 33 | 5 | 7 | 4 | 17 | 11 | 13 | 25 | 89 | |
| ---------------------------------GAGGTAGTAGGTTGTATG------------------------------------------------------------------------------- | 18 | 33 | 22 | 14 | 14 | 11 | 13 | 4 | 17 | 15 | 38 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGT----------------------------------------------------------------------------- | 20 | 45 | 20 | 4 | 5 | 16 | 11 | 8 | 13 | 9 | 36 | |
| ---------------------------------GAGGTAGTAGGTTGTATGG------------------------------------------------------------------------------ | 19 | 39 | 18 | 7 | 3 | 8 | 6 | 6 | 14 | 8 | 32 | |
| -----------------------------------------------------------------------------CTGTACAACCTTCTAGCTTTCC------------------------------- | 22 | 43 | 29 | 6 | 12 | 9 | - | - | 5 | 16 | 5 | |
| -----------------------------------------------------------------------------CTGTACAACCTTCTAGCT----------------------------------- | 18 | 14 | 12 | 3 | 4 | 7 | 2 | 2 | 2 | 2 | 7 | |
| -----------------------------------------------------------------------------CTGTACAACCTTCTAGCTT---------------------------------- | 19 | 12 | 7 | 3 | 1 | 4 | 2 | - | - | 2 | 2 | |
| -------------------------------TTGAGGTAGTAGGTTGTA--------------------------------------------------------------------------------- | 18 | 11 | 3 | - | - | 1 | 1 | 1 | 2 | - | 2 | |
| -------------------------------TTGAGGTAGTAGGTTGTAT-------------------------------------------------------------------------------- | 19 | 8 | 3 | 2 | - | - | 2 | 1 | 1 | - | 3 | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTTT--------------------------------------------------------------------------- | 22 | 1 | 3 | 1 | 1 | - | 1 | 1 | 4 | 1 | 6 | |
| --------------------------------TGAGGTAGTAGGTTGTATGGTTTA-------------------------------------------------------------------------- | 24 | 3 | 1 | 4 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | |
| -------------------------------TTGAGGTAGTAGGTTGTATGGTT---------------------------------------------------------------------------- | 23 | 5 | 3 | - | - | - | - | - | - | 2 | - | |
| -----------------------------------------------------------------------------CTGTACAACCTTCTAGCTTTCCT------------------------------ | 23 | 3 | 2 | 1 | 1 | - | 1 | 1 | - | - | - | |
| -----------------------------------------------------------------------------CTGTACAACCTTCTAGCTTT--------------------------------- | 20 | 4 | 4 | - | - | - | 1 | - | - | - | - | |
| ----------------------------------AGGTAGTAGGTTGTATGGT----------------------------------------------------------------------------- | 19 | 2 | 1 | 1 | - | 2 | - | - | 1 | - | 1 | |
| ------------------------------------------------------TAGAGTTACACCCTGGGAGTTA------------------------------------------------------ | 22 | 2 | 2 | - | 1 | - | 1 | - | 1 | 1 | - | |
| ----------------------------------AGGTAGTAGGTTGTATGGTT---------------------------------------------------------------------------- | 20 | 2 | 1 | - | - | - | - | - | 1 | - | 1 | |
| ------------------------------------------------------TAGAGTTACACCCTGGGAG--------------------------------------------------------- | 19 | 3 | 1 | - | - | - | 1 | - | - | - | - | |
| ------------------------------------------------------TAGAGTTACACCCTGGGAGTTAAC---------------------------------------------------- | 24 | 2 | 1 | - | 1 | - | - | - | - | 1 | - | |
| ------------------------------------GTAGTAGGTTGTATGGTT---------------------------------------------------------------------------- | 18 | - | 3 | 1 | - | 1 | - | - | - | - | - | |
| -------------------------------TTGAGGTAGTAGGTTGTATG------------------------------------------------------------------------------- | 20 | 3 | - | - | - | - | - | - | - | - | 1 | |
| ------------------------------------------------------TAGAGTTACACCCTGGGAGTT------------------------------------------------------- | 21 | 1 | 1 | - | - | 1 | - | - | - | - | 1 | |
| ------------------------------------------------------TAGAGTTACACCCTGGGAGT-------------------------------------------------------- | 20 | 1 | 2 | - | - | - | - | - | 1 | - | - | |
| -----------------------------------GGTAGTAGGTTGTATGGT----------------------------------------------------------------------------- | 18 | - | 1 | - | - | 1 | - | - | 1 | - | 1 | |
| -------------------------------TTGAGGTAGTAGGTTGTATGG------------------------------------------------------------------------------ | 21 | 2 | - | - | - | - | - | - | 1 | - | - | |
| ------------------------------------------------------TAGAGTTACACCCTGGGA---------------------------------------------------------- | 18 | 2 | - | - | - | 1 | - | - | - | - | - | |
| -----------------------------------GGTAGTAGGTTGTATGGTTTA-------------------------------------------------------------------------- | 21 | - | - | 2 | - | - | - | - | - | - | - | |
| ------------------------------GTTGAGGTAGTAGGTTGTA--------------------------------------------------------------------------------- | 19 | 2 | - | - | - | - | - | - | - | - | - | |
| -------------------------------TTGAGGTAGTAGGTTGTATGGT----------------------------------------------------------------------------- | 22 | - | 1 | - | - | - | - | - | - | 1 | - | |
| ------------------------------------------------------------------------------TGTACAACCTTCTAGCTTTCC------------------------------- | 21 | - | - | - | 1 | - | - | - | 1 | - | - | |
| ------------------------------------GTAGTAGGTTGTATGGTTT--------------------------------------------------------------------------- | 19 | - | - | 1 | - | - | - | - | 1 | - | - | |
| ----------------------------GGGTTGAGGTAGTAGGTTG----------------------------------------------------------------------------------- | 19 | - | - | - | - | - | - | - | - | 2 | - | |
| -----------------------------------------------------------------------------CTGTACAACCTTCTAGCTTTC-------------------------------- | 21 | - | 1 | - | 1 | - | - | - | - | - | - | |
| ------------------------------------------------------TAGAGTTACACCCTGGGAGTTAA----------------------------------------------------- | 23 | 1 | - | - | - | - | - | - | - | - | - | |
| ----------------------------------AGGTAGTAGGTTGTATGG------------------------------------------------------------------------------ | 18 | - | - | - | - | 1 | - | - | - | - | - | |
| -----------------------------------------------------------------------AGTTAACTGTACAACCTTCTAGCT----------------------------------- | 24 | - | - | - | - | - | 1 | - | - | - | - | |
| -----------------------------GGTTGAGGTAGTAGGTTGT---------------------------------------------------------------------------------- | 19 | - | 1 | - | - | - | - | - | - | - | - | |
| ------------------------------------------------------------------------------TGTACAACCTTCTAGCTTTCCT------------------------------ | 22 | - | - | - | - | - | - | - | 1 | - | - | |
| ---------------------------------GAGGTAGTAGGTTGTATGGTTTA-------------------------------------------------------------------------- | 23 | - | - | - | - | 1 | - | - | - | - | - | |
| -----------------------------GGTTGAGGTAGTAGGTTGTAT-------------------------------------------------------------------------------- | 21 | - | - | - | - | - | 1 | - | - | - | - | |
| rat | -----------------TGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCCTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACT------------------- | |||||||||||
| human | GAAGCAACATTGGAAGCTGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCCTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACTTGAGCCGTCGAGGAATTC- | |||||||||||
| mouse | --AGAAACATTGGAAGCTGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCCTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACTTGAGCCATCGAGGAATTCT | |||||||||||
| ********************************************************************************************** | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053623 ENSRNOG00000035500 rno-let-7c-1 | |||||||||||
| rat | .((((((.((((((..(((.(((.(((((((((((((..((.(..(.....)..).))))))))))))))).))).)))..)))))))))))). | 1.000 -43.30 | ||||||||||
| human | .........((((..(((((((((.((((((..(((.(((.(((((((((((((.......((.((...)).)).))))))))))))).))).)))..))))))))))))...)))..))))....... | 0.989 -47.10 | ||||||||||
| mouse | ((((...((((..(((((((((.((((((..(((.(((.(((((((((((((.......((.((...)).)).))))))))))))).))).)))..))))))))))))...)))..))))....)))) | 0.967 -47.20 | ||||||||||
| rat | chromosome:11:16398264:16398357:1 | Same_strand|Exonic_non-coding|ENSRNOT00000053623|ENSRNOG00000035500 ## ENSRNOG00000035500|miRNA|rno-let-7c-1|rno-let-7c-1 [Source:miRBase;Acc:MI0000830] ## {MIR: rno-let-7c-1} |
| human | chromosome:21:16833997:16834125:1 | Same_strand|Boundary_non-coding|ENST00000400176|ENSG00000215386|protein_coding|Putative uncharacterized protein C21orf34 (Chromosome 21 open reading frame 34, isoform CRA_a) [Source:UniProtKB/TrEMBL;Acc:A6NJD3] ## Same_strand|Intronic_non-coding|ENST00000400178|ENSG00000215386|protein_coding|Putative uncharacterized protein C21orf34 (Chromosome 21 open reading frame 34, isoform CRA_a) [Source:UniProtKB/TrEMBL;Acc:A6NJD3] ## {MIR: hsa-let-7c} |
| mouse | chromosome:16:77599887:77600014:1 | Opposite_strand|Intronic_coding|ENSMUST00000114231|ENSMUSG00000079546|protein_coding| ## Same_strand|Boundary_non-coding|ENSMUST00000083623|ENSMUSG00000065557|miRNA|mmu-let-7c-1 [Source:miRBase;Acc:MI0000559] ## {MIR: mmu-let-7c-1} |
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