rno-let-7d-as
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-let-7d-as 3arm | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-let-7d-as 3arm | 0 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
block604561 (Antisense miRBase rno-let-7d-as) [miRBaseNonMapped_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBaseAS rno-let-7d-as | 0.001 | no | no | 0.43/0.43 | 21/21/1.00 | 0.0 | 0.0 | 2 | 0 | 1 | 0 | 13 | 8 | 3arm | 1 | nd | 0.19 | 1 | 2 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------------------------------------------------------------------ACUAUGC---------------------------------------------- | 2 | novel |
| len | cloning frequencies | ||
| T1S2 | |||
| ----------------------------------------------------------------------------AACTATGCAACCTACTACCTC--------------------------------- | 21 | 2 | |
| rat | ---------------GGCCCTAAGAAAGGCAGCAGGTCGTATAGTTAACTCCTTGTGGGCAAAATCTCTGCCCTAAAACTATGCAACCTACTACCTCTTCCTAGGAGCCC-------------------- | ||
| human | ATCGGTGAATAATAAGGCCCTAAGAAAGGCAGCAGGTCGTATAGTTACCTCCTTGTGGGCAAAATCCCTGCCCTAAAACTATGCAACCTACTACCTCTTCCTAGGAACCCATTTTTTTTTTCTTGCTGGT | ||
| mouse | -------------------------AAGGCAGCAGGTCGTATAGTTAACTCCTTGTGGGCAAAATCTCTGCCCTAAAACTATGCAACCTACTACCTC--------------------------------- | ||
| ********************** ****************** ****************************** | |||
| ...<< <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <.... | ENSRNOT00000053717 ENSRNOG00000035594 rno-let-7d | ||
| rat | (((((((.((((((.((.((((.((((((((......(((.(((((.......)))))))))))))))).)))).)).))).))).)))).))). | 0.500 -37.40 | |
| human | (((((((((.((.((((.((((.((((((.((.((((.((((((((......(((.(((((.......)))))))))))))))).)))).)).))).))).))))...)).))...)).)))..)))))) | 0.905 -35.30 | |
| mouse | .(((.((.((((.((((((((......(((.(((((.......)))))))))))))))).)))).)).))). | 0.502 -24.30 |
| rat | chromosome:17:22121895:22121989:-1 | Opposite_strand|Exonic_non-coding|ENSRNOT00000053717|ENSRNOG00000035594 ## ENSRNOG00000035594|miRNA|rno-let-7d|rno-let-7d [Source:miRBase;Acc:MI0000601] ## {ASMIR: rno-let-7d-as} |
| human | chromosome:9:95980912:95981041:-1 | Opposite_strand|Boundary_non-coding|ENST00000362263|ENSG00000199133|miRNA|hsa-let-7d [Source:miRBase;Acc:MI0000065] ## {Repeats: dust 0 class=dust} ## {ASMIR: hsa-let-7d-as} |
| mouse | chromosome:13:48631366:48631500:1 | Opposite_strand|Boundary_non-coding|ENSMUST00000083519|ENSMUSG00000065453|miRNA|mmu-let-7d [Source:miRBase;Acc:MI0000405] ## {ASMIR: mmu-let-7d-as} |
©2008 InteRNA Genomics B.V.