rno-mir-10a
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-10a 5arm | 220 | 158 | 5176 | 4779 | 7322 | 3629 | 1181 | 2303 | 42799 | 38318 |
| rno-mir-10a 3arm | 1 | 1 | 23 | 18 | 59 | 21 | 4 | 8 | 162 | 359 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-10a 5arm | 0.007 | 0.007 | 0.280 | 0.283 | 0.357 | 0.275 | 0.092 | 0.121 | 2.822 | 2.550 |
| rno-mir-10a 3arm | 0.000 | 0.000 | 0.001 | 0.001 | 0.003 | 0.002 | 0.000 | 0.000 | 0.011 | 0.024 |
sblock2795 (miRBase rno-mir-10a) [miRNAknown_lenNOK_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-10a | 0.008 | no | no | 0.32/0.50 | 18/26/0.56 | 1.0 0.2 0.0 0.0 0.5 | 2.0 1.2 0.0 0.4 2.0 | 3 61124 2 335 2 | 0 0 0 0 0 | 2 10 2 10 2 | 0 0 0 0 0 | 0 21 46 26 0 | 23 1 -16 2 23 | 5arm 5arm_loop 3arm_loop 3arm 3arm | 1 1 1 1 1 | nd nd nd nd nd | 0.21 0.10 0.79 0.10 0.48 | 2 1 15 1 5 | 106541 | 10 | 1 | 1 |
| Member of family miR-10a (seed AAAUUCG): rno-mir-10a, rno-mir-10a |
| reads | miRBase family seed | |||||||||||
| seed | -------------------------------------ACCCUGU----------------------------------------------------------------------------------------------- | 73301 | miR-10a | |||||||||
| seed | --------------------------------------CCCUGUA---------------------------------------------------------------------------------------------- | 32136 | novel | |||||||||
| seed | ------------------------------------------------------------------------------AAAUUCG------------------------------------------------------ | 523 | miR-10a | |||||||||
| seed | ------------------------------------UACCCUG------------------------------------------------------------------------------------------------ | 297 | novel | |||||||||
| seed | ---------------------------------------CCUGUAG--------------------------------------------------------------------------------------------- | 132 | miR-10b | |||||||||
| seed | -----------------------------------------------------------------------------CAAAUUC------------------------------------------------------- | 43 | novel | |||||||||
| seed | -------------------------------------------------------------------------------AAUUCGU----------------------------------------------------- | 38 | novel | |||||||||
| seed | ---------------------------------------------------------------------------CACAAAU--------------------------------------------------------- | 23 | novel | |||||||||
| seed | ----------------------------------------------------------------------------ACAAAUU-------------------------------------------------------- | 16 | novel | |||||||||
| seed | ----------------------------------------CUGUAGA-------------------------------------------------------------------------------------------- | 13 | novel | |||||||||
| seed | --------------------------------------------------------------------------------AUUCGUA---------------------------------------------------- | 9 | novel | |||||||||
| seed | -----------------------------------------UGUAGAU------------------------------------------------------------------------------------------- | 3 | novel | |||||||||
| seed | ------------------------------------------------------------AAGGAAU------------------------------------------------------------------------ | 2 | novel | |||||||||
| seed | -----------------CCUGUCU------------------------------------------------------------------------------------------------------------------- | 1 | novel | |||||||||
| seed | ------------------CUGUCUG------------------------------------------------------------------------------------------------------------------ | 1 | novel | |||||||||
| seed | ---------------------------------------------------------------------------------------------------UGUAGUU--------------------------------- | 1 | novel | |||||||||
| seed | ----------------------------------------------------------------------------------------------------GUAGUUG-------------------------------- | 1 | novel | |||||||||
| seed | ----------------ACCUGUC-------------------------------------------------------------------------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| ------------------------------------TACCCTGTAGATCCGAATTTG---------------------------------------------------------------------------------- | 21 | 43 | 43 | 947 | 1150 | 1759 | 933 | 222 | 432 | 10675 | 6418 | |
| ------------------------------------TACCCTGTAGATCCGAATT------------------------------------------------------------------------------------ | 19 | 38 | 29 | 917 | 1034 | 1415 | 726 | 266 | 584 | 6854 | 6466 | |
| ------------------------------------TACCCTGTAGATCCGAAT------------------------------------------------------------------------------------- | 18 | 37 | 27 | 913 | 825 | 1529 | 757 | 223 | 375 | 6324 | 6979 | |
| -------------------------------------ACCCTGTAGATCCGAATTTG---------------------------------------------------------------------------------- | 20 | 26 | 21 | 784 | 635 | 1087 | 482 | 203 | 280 | 7552 | 4659 | |
| ------------------------------------TACCCTGTAGATCCGAATTTGT--------------------------------------------------------------------------------- | 22 | 15 | 12 | 564 | 302 | 296 | 161 | 42 | 148 | 1503 | 5197 | |
| -------------------------------------ACCCTGTAGATCCGAATT------------------------------------------------------------------------------------ | 18 | 21 | 4 | 377 | 308 | 535 | 221 | 85 | 130 | 3130 | 2700 | |
| ------------------------------------TACCCTGTAGATCCGAATTT----------------------------------------------------------------------------------- | 20 | 16 | 3 | 159 | 147 | 189 | 108 | 38 | 108 | 1630 | 1458 | |
| -------------------------------------ACCCTGTAGATCCGAATTT----------------------------------------------------------------------------------- | 19 | 15 | 13 | 152 | 142 | 173 | 88 | 24 | 101 | 1312 | 843 | |
| -------------------------------------ACCCTGTAGATCCGAATTTGTG-------------------------------------------------------------------------------- | 22 | 3 | 2 | 84 | 45 | 86 | 26 | 21 | 28 | 1261 | 879 | |
| -------------------------------------ACCCTGTAGATCCGAATTTGT--------------------------------------------------------------------------------- | 21 | 4 | 2 | 78 | 60 | 77 | 50 | 10 | 37 | 590 | 943 | |
| -------------------------------------ACCCTGTAGATCCGAATTTGTGT------------------------------------------------------------------------------- | 23 | - | 1 | 81 | 46 | 51 | 28 | 17 | 29 | 768 | 726 | |
| ------------------------------------TACCCTGTAGATCCGAATTTGTGT------------------------------------------------------------------------------- | 24 | 2 | - | 57 | 48 | 51 | 19 | 17 | 22 | 543 | 405 | |
| rno-miR-10a-5p | ------------------------------------TACCCTGTAGATCCGAATTTGTG-------------------------------------------------------------------------------- | 23 | - | - | 41 | 22 | 47 | 11 | 8 | 20 | 495 | 457 |
| -----------------------------------------------------------------------------CAAATTCGTATCTAGGGGAA------------------------------------------ | 20 | 1 | - | 4 | 6 | 21 | 6 | 1 | 3 | 76 | 122 | |
| -----------------------------------------------------------------------------CAAATTCGTATCTAGGGGAAT----------------------------------------- | 21 | - | 1 | 4 | 5 | 9 | 4 | 1 | 1 | 12 | 86 | |
| -----------------------------------------------------------------------------CAAATTCGTATCTAGGGGA------------------------------------------- | 19 | - | - | 7 | 1 | 6 | 6 | - | 2 | 30 | 51 | |
| -----------------------------------ATACCCTGTAGATCCGAA-------------------------------------------------------------------------------------- | 18 | - | - | 2 | 2 | 6 | 7 | 2 | 2 | 30 | 42 | |
| --------------------------------------CCCTGTAGATCCGAATTTG---------------------------------------------------------------------------------- | 19 | - | 1 | 4 | 4 | 7 | 4 | - | 1 | 43 | 27 | |
| -----------------------------------ATACCCTGTAGATCCGAAT------------------------------------------------------------------------------------- | 19 | - | - | 4 | 4 | 8 | - | - | - | 20 | 26 | |
| -----------------------------------ATACCCTGTAGATCCGAATTTGT--------------------------------------------------------------------------------- | 23 | - | - | 2 | - | 3 | 3 | - | 3 | 13 | 24 | |
| -----------------------------------------------------------------------------CAAATTCGTATCTAGGGG-------------------------------------------- | 18 | - | - | 2 | 1 | 4 | 1 | - | - | 9 | 25 | |
| -----------------------------------ATACCCTGTAGATCCGAATTTG---------------------------------------------------------------------------------- | 22 | - | - | 2 | 1 | 1 | - | 2 | 2 | 16 | 16 | |
| -----------------------------------ATACCCTGTAGATCCGAATT------------------------------------------------------------------------------------ | 20 | - | - | 3 | 1 | 1 | 3 | 1 | 1 | 8 | 11 | |
| ------------------------------------------------------------------------------AAATTCGTATCTAGGGGAA------------------------------------------ | 19 | - | - | 2 | - | 5 | - | - | 1 | 5 | 8 | |
| -----------------------------------ATACCCTGTAGATCCGAATTT----------------------------------------------------------------------------------- | 21 | - | - | 2 | 2 | - | - | - | - | 9 | 7 | |
| --------------------------------------CCCTGTAGATCCGAATTTGTG-------------------------------------------------------------------------------- | 21 | - | - | 1 | - | 1 | - | - | - | 9 | 7 | |
| ----------------------------------------------------------------------------ACAAATTCGTATCTAGGGGAA------------------------------------------ | 21 | - | - | 1 | - | 1 | 1 | - | - | 5 | 8 | |
| --------------------------------------CCCTGTAGATCCGAATTTGTGT------------------------------------------------------------------------------- | 22 | - | - | - | - | - | 2 | - | - | 3 | 7 | |
| ----------------------------------------------------------------------------ACAAATTCGTATCTAGGGGA------------------------------------------- | 20 | - | - | - | 1 | 2 | - | 1 | - | 1 | 6 | |
| rno-miR-10a-3p | -----------------------------------------------------------------------------CAAATTCGTATCTAGGGGAATA---------------------------------------- | 22 | - | - | - | - | 4 | - | - | - | 1 | 5 |
| --------------------------------------CCCTGTAGATCCGAATTTGT--------------------------------------------------------------------------------- | 20 | - | - | - | - | - | - | - | - | 4 | 6 | |
| ----------------------------------------------------------------------------ACAAATTCGTATCTAGGG--------------------------------------------- | 18 | - | - | 1 | - | 3 | - | - | - | 2 | 3 | |
| --------------------------------------------------------------------------TCACAAATTCGTATCTAGGGGA------------------------------------------- | 22 | - | - | - | - | 1 | - | - | - | 5 | 3 | |
| --------------------------------------------------------------------------TCACAAATTCGTATCTAGGGGAA------------------------------------------ | 23 | - | - | - | - | - | - | - | - | 2 | 6 | |
| ---------------------------------------------------------------------------CACAAATTCGTATCTAGGGGAA------------------------------------------ | 22 | - | - | - | - | - | 1 | - | - | 2 | 5 | |
| -------------------------------------------------------------------------------AATTCGTATCTAGGGGAATAT--------------------------------------- | 21 | - | - | - | - | - | - | 1 | - | - | 6 | |
| ------------------------------------------------------------------------------AAATTCGTATCTAGGGGAATAT--------------------------------------- | 22 | - | - | 1 | - | - | 1 | - | - | 2 | 3 | |
| ---------------------------------------CCTGTAGATCCGAATTTGT--------------------------------------------------------------------------------- | 19 | - | - | - | 1 | - | - | - | - | 1 | 3 | |
| ---------------------------------------CCTGTAGATCCGAATTTG---------------------------------------------------------------------------------- | 18 | - | - | 1 | - | - | - | - | - | 1 | 3 | |
| -----------------------------------------------------------------------------CAAATTCGTATCTAGGGGAATAT--------------------------------------- | 23 | - | - | - | - | - | - | - | - | 2 | 3 | |
| ------------------------------------------------------------------------------AAATTCGTATCTAGGGGAAT----------------------------------------- | 20 | - | - | 1 | 1 | 1 | - | - | - | - | 2 | |
| ------------------------------------------------------------------------------AAATTCGTATCTAGGGGAATA---------------------------------------- | 21 | - | - | - | 1 | 1 | 1 | - | - | - | 1 | |
| ---------------------------------------------------------------------------CACAAATTCGTATCTAGGGGA------------------------------------------- | 21 | - | - | - | - | - | - | - | - | - | 3 | |
| ----------------------------------------------------------------------------ACAAATTCGTATCTAGGGG-------------------------------------------- | 19 | - | - | - | - | - | - | - | - | 1 | 2 | |
| ---------------------------------------------------------------------------CACAAATTCGTATCTAGGG--------------------------------------------- | 19 | - | - | - | - | - | - | - | - | - | 3 | |
| -----------------------------------ATACCCTGTAGATCCGAATTTGTG-------------------------------------------------------------------------------- | 24 | - | - | 1 | - | - | - | - | - | - | 2 | |
| -------------------------------------------------------------------------------AATTCGTATCTAGGGGAAT----------------------------------------- | 19 | - | - | - | - | - | - | - | - | 1 | 1 | |
| ---------------------------------------CCTGTAGATCCGAATTTGTGT------------------------------------------------------------------------------- | 21 | - | - | - | - | - | - | - | - | 2 | - | |
| ----------------------------------------------------------------------------ACAAATTCGTATCTAGGGGAATA---------------------------------------- | 23 | - | - | - | - | - | - | - | - | 2 | - | |
| ----------------------------------------CTGTAGATCCGAATTTGT--------------------------------------------------------------------------------- | 18 | - | - | - | - | - | - | - | - | - | 2 | |
| --------------------------------------------------------------------------TCACAAATTCGTATCTAG----------------------------------------------- | 18 | - | - | - | - | - | - | - | - | 1 | 1 | |
| ---------------------------------------------------------------------------CACAAATTCGTATCTAGG---------------------------------------------- | 18 | - | - | - | 1 | - | - | - | - | - | 1 | |
| --------------------------------------------------------------------------TCACAAATTCGTATCTAGG---------------------------------------------- | 19 | - | - | - | - | 1 | - | - | - | 1 | - | |
| -----------------------------------------------------------TAAGGAATTTTGTGGTCAC------------------------------------------------------------- | 19 | - | - | - | 1 | - | - | - | - | 1 | - | |
| -----------------------------------ATACCCTGTAGATCCGAATTTGTGT------------------------------------------------------------------------------- | 25 | - | - | - | - | - | - | - | - | 1 | 1 | |
| --------------------------------------------------------------------------TCACAAATTCGTATCTAGGG--------------------------------------------- | 20 | - | - | - | - | - | - | - | - | - | 2 | |
| ----------------------------------------------------------------------------ACAAATTCGTATCTAGGGGAAT----------------------------------------- | 22 | - | - | - | - | - | - | - | - | - | 2 | |
| ------------------------------------------------------------------------------AAATTCGTATCTAGGGGA------------------------------------------- | 18 | - | - | - | - | - | - | - | 1 | - | - | |
| ---------------------------------------CCTGTAGATCCGAATTTGTG-------------------------------------------------------------------------------- | 20 | - | - | - | - | - | - | - | - | 1 | - | |
| --------------------------------------------------------------------------------------------------ATGTAGTTGACATAAACACTCCGCTC--------------- | 26 | - | - | - | - | - | - | - | - | 1 | - | |
| -----------------CCTGTCTGTCTTCTGTATA------------------------------------------------------------------------------------------------------- | 19 | - | - | - | - | - | - | - | - | 1 | - | |
| ---------------------------------------------------------------------------------------------------TGTAGTTGACATAAACACTCC------------------- | 21 | - | - | - | - | - | - | - | - | - | 1 | |
| ----------------ACCTGTCTGTCTTCTGTATA------------------------------------------------------------------------------------------------------- | 20 | - | - | - | - | - | - | - | - | - | 1 | |
| ---------------GACCTGTCTGTCTTCTGT---------------------------------------------------------------------------------------------------------- | 18 | - | - | - | - | - | - | - | - | - | 1 | |
| ----------------------------------------CTGTAGATCCGAATTTGTGT------------------------------------------------------------------------------- | 20 | - | - | - | - | - | - | - | - | - | 1 | |
| --------------------------------------CCCTGTAGATCCGAATTT----------------------------------------------------------------------------------- | 18 | - | - | - | - | - | - | - | - | - | 1 | |
| rat | ---------------GACCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATTTTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTC--------------- | |||||||||||
| human | TTTCTGGGCCAAGAAGATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATTTTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCTTATTTTTCCAGAAG | |||||||||||
| mouse | ------------------------------------TACCCTGTAGATCCGAATTTGTGTAAGGAATTTTGTGGTCACAAATTCGTATCTAGGGGA------------------------------------------- | |||||||||||
| ************************************************************ | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >.... | ENSRNOT00000053658 ENSRNOG00000035535 rno-mir-10a | |||||||||||
| rat | ....(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...)))........ | 0.940 -32.39 | ||||||||||
| human | .(((((((.....((((..(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...)))......)))).....))))))). | 0.897 -41.99 | ||||||||||
| mouse | ...(((.(((((.((((((((((................)))))))))).))))).))). | 1.000 -22.49 | ||||||||||
| rat | chromosome:10:85049314:85049422:1 | Same_strand|Exonic_non-coding|ENSRNOT00000053658|ENSRNOG00000035535 ## ENSRNOG00000035535|miRNA|rno-mir-10a|rno-mir-10a [Source:miRBase;Acc:MI0000841] ## {MIR: rno-mir-10a} |
| human | chromosome:17:44012185:44012323:-1 | Same_strand|Boundary_non-coding|ENST00000385043|ENSG00000207777|miRNA|hsa-mir-10a [Source:miRBase;Acc:MI0000266] ## {MIR: hsa-mir-10a} |
| mouse | chromosome:11:96178459:96178607:1 | Same_strand|Boundary_non-coding|ENSMUST00000083585|ENSMUSG00000065519|miRNA|mmu-mir-10a [Source:miRBase;Acc:MI0000685] ## {MIR: mmu-mir-10a} |
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